RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 DCAF4L1Q3SXM0 396 aa12.65□□□□□ -0.38
PFDN1-201ENST00000261813 ZNF568Q3ZCX4 644 aa12.65□□□□□ -0.38
PFDN1-201ENST00000261813 L1TD1Q5T7N2 865 aaKnown RBP12.65□□□□□ -0.38
PFDN1-201ENST00000261813 MPZL3Q6UWV2 235 aa12.65□□□□□ -0.38
PFDN1-201ENST00000261813 EPM2AIP1Q7L775 607 aaPredicted RBP12.65□□□□□ -0.38
PFDN1-201ENST00000261813 CEP120Q8N960 986 aa12.65□□□□□ -0.38
PFDN1-201ENST00000261813 MYLIPQ8WY64 445 aa12.65□□□□□ -0.38
PFDN1-201ENST00000261813 ERCC4Q92889 916 aaPredicted RBP12.65□□□□□ -0.38
PFDN1-201ENST00000261813 TIFAQ96CG3 184 aa12.65□□□□□ -0.38
PFDN1-201ENST00000261813 BICD1Q96G01 975 aa12.65□□□□□ -0.38
PFDN1-201ENST00000261813 CASD1Q96PB1 797 aa12.65□□□□□ -0.38
PFDN1-201ENST00000261813 PHOX2BQ99453 314 aa12.65□□□□□ -0.38
PFDN1-201ENST00000261813 ADPGKQ9BRR6 497 aa12.65□□□□□ -0.38
PFDN1-201ENST00000261813 TRIM6Q9C030 488 aaPredicted RBP12.65□□□□□ -0.38
PFDN1-201ENST00000261813 HAPLN2Q9GZV7 340 aa12.65□□□□□ -0.38
PFDN1-201ENST00000261813 EXOC1Q9NV70 894 aa12.65□□□□□ -0.38
PFDN1-201ENST00000261813 MSRAQ9UJ68 235 aa12.65□□□□□ -0.38
PFDN1-201ENST00000261813 MAN1B1Q9UKM7 699 aa12.65□□□□□ -0.38
PFDN1-201ENST00000261813 TBKBP1A7MCY6 615 aa12.64□□□□□ -0.39
PFDN1-201ENST00000261813 ANKRD63C9JTQ0 380 aa12.64□□□□□ -0.39
PFDN1-201ENST00000261813 HNRNPDLO14979 420 aaKnown RBP12.64□□□□□ -0.39
PFDN1-201ENST00000261813 TOM1L1O75674 476 aa12.64□□□□□ -0.39
PFDN1-201ENST00000261813 RHOBTB3O94955 611 aa12.64□□□□□ -0.39
PFDN1-201ENST00000261813 LIG4P49917 911 aa12.64□□□□□ -0.39
PFDN1-201ENST00000261813 STK4Q13043 487 aa12.64□□□□□ -0.39
PFDN1-201ENST00000261813 ALCAMQ13740 583 aa12.64□□□□□ -0.39
PFDN1-201ENST00000261813 MORC3Q14149 939 aa12.64□□□□□ -0.39
PFDN1-201ENST00000261813 PAN2Q504Q3 1202 aaKnown RBP12.64□□□□□ -0.39
PFDN1-201ENST00000261813 ZNF658Q5TYW1 1059 aaPredicted RBP12.64□□□□□ -0.39
PFDN1-201ENST00000261813 SPRED2Q7Z698 418 aa12.64□□□□□ -0.39
PFDN1-201ENST00000261813 ZBTB33Q86T24 672 aa12.64□□□□□ -0.39
PFDN1-201ENST00000261813 KIAA0895Q8NCT3 520 aa12.64□□□□□ -0.39
PFDN1-201ENST00000261813 HELQQ8TDG4 1101 aa12.64□□□□□ -0.39
PFDN1-201ENST00000261813 PGBD4Q96DM1 585 aa12.64□□□□□ -0.39
PFDN1-201ENST00000261813 ACCSQ96QU6 501 aa12.64□□□□□ -0.39
PFDN1-201ENST00000261813 APOL6Q9BWW8 343 aa12.64□□□□□ -0.39
PFDN1-201ENST00000261813 TMEM117Q9H0C3 514 aa12.64□□□□□ -0.39
PFDN1-201ENST00000261813 SLC39A2Q9NP94 309 aa12.64□□□□□ -0.39
PFDN1-201ENST00000261813 PRDM6Q9NQX0 595 aa12.64□□□□□ -0.39
PFDN1-201ENST00000261813 SNTG2Q9NY99 539 aa12.64□□□□□ -0.39
PFDN1-201ENST00000261813 ANKFY1Q9P2R3 1169 aa12.64□□□□□ -0.39
PFDN1-201ENST00000261813 ZMYM2Q9UBW7 1377 aa12.63□□□□□ -0.39
PFDN1-201ENST00000261813 LINC01553A4QN01 128 aa12.63□□□□□ -0.39
PFDN1-201ENST00000261813 GOLGA6L3A6NEY3 463 aa12.63□□□□□ -0.39
PFDN1-201ENST00000261813 EIF3DO15371 548 aaKnown RBP eCLIP12.63□□□□□ -0.39
PFDN1-201ENST00000261813 HOXA2O43364 376 aa12.63□□□□□ -0.39
PFDN1-201ENST00000261813 OFD1O75665 1012 aa12.63□□□□□ -0.39
PFDN1-201ENST00000261813 ZMYND10O75800 440 aa12.63□□□□□ -0.39
PFDN1-201ENST00000261813 LINC00271P0C7V0 271 aa12.63□□□□□ -0.39
PFDN1-201ENST00000261813 MCF2P10911 925 aa12.63□□□□□ -0.39
PFDN1-201ENST00000261813 HARSP12081 509 aaKnown RBP12.63□□□□□ -0.39
PFDN1-201ENST00000261813 ITGA4P13612 1032 aa12.63□□□□□ -0.39
PFDN1-201ENST00000261813 AKAP5P24588 427 aa12.63□□□□□ -0.39
PFDN1-201ENST00000261813 HOXD13P35453 343 aa12.63□□□□□ -0.39
PFDN1-201ENST00000261813 AFF1P51825 1210 aaKnown RBP12.63□□□□□ -0.39
PFDN1-201ENST00000261813 TAP1Q03518 808 aa12.63□□□□□ -0.39
PFDN1-201ENST00000261813 MCL1Q07820 350 aa12.63□□□□□ -0.39
PFDN1-201ENST00000261813 BTG3Q14201 252 aaPredicted RBP12.63□□□□□ -0.39
PFDN1-201ENST00000261813 NOLC1Q14978 699 aaKnown RBP eCLIP12.63□□□□□ -0.39
PFDN1-201ENST00000261813 STXBP4Q6ZWJ1 553 aa12.63□□□□□ -0.39
PFDN1-201ENST00000261813 CMTR2Q8IYT2 770 aaKnown RBP12.63□□□□□ -0.39
PFDN1-201ENST00000261813 ZNF507Q8TCN5 953 aa12.63□□□□□ -0.39
PFDN1-201ENST00000261813 SCFD1Q8WVM8 642 aa12.63□□□□□ -0.39
PFDN1-201ENST00000261813 BPIFA3Q9BQP9 254 aa12.63□□□□□ -0.39
PFDN1-201ENST00000261813 TCHPQ9BT92 498 aa12.63□□□□□ -0.39
PFDN1-201ENST00000261813 RSAD1Q9HA92 442 aa12.63□□□□□ -0.39
PFDN1-201ENST00000261813 MRPL42Q9Y6G3 142 aaKnown RBP12.63□□□□□ -0.39
PFDN1-201ENST00000261813 FNDC1Q4ZHG4 1894 aaPredicted RBP12.62□□□□□ -0.39
PFDN1-201ENST00000261813 SMTNL1A8MU46 457 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 BIN1O00499 593 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 CLDN3O15551 220 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 FAM189A1O60320 539 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 ERCC5P28715 1186 aaPredicted RBP12.62□□□□□ -0.39
PFDN1-201ENST00000261813 MLH1P40692 756 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 GRM5P41594 1212 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 ZNF165P49910 485 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 TPM4P67936 248 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 BMT2Q1RMZ1 405 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 ANO6Q4KMQ2 910 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 SEZ6Q53EL9 994 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 COBLL1Q53SF7 1204 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 PPP2R2DQ66LE6 453 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 LRRC55Q6ZSA7 311 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 TMEM192Q8IY95 271 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 THNSL1Q8IYQ7 743 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 ABI1Q8IZP0 508 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 FIBCD1Q8N539 461 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 FAM200AQ8TCP9 573 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 CXCL16Q9H2A7 254 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 TTYH1Q9H313 450 aaPredicted RBP12.62□□□□□ -0.39
PFDN1-201ENST00000261813 TMEM206Q9H813 350 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 SLC28A3Q9HAS3 691 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 KLK14Q9P0G3 267 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 EXOC7Q9UPT5 735 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 INPP5FQ9Y2H2 1132 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 GDAQ9Y2T3 454 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 GIT1Q9Y2X7 761 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 STYXL1Q9Y6J8 313 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 UBE4BO95155 1302 aa12.62□□□□□ -0.39
PFDN1-201ENST00000261813 A0A0B4J269 797 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms