RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 C1orf186Q6ZWK4 172 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 DHX38Q92620 1227 aaKnown RBP16.99■□□□□ 0.31
LMNB1-201ENST00000261366 KCNQ5Q9NR82 932 aa16.99■□□□□ 0.31
LMNB1-201ENST00000261366 LINGO3P0C6S8 592 aa16.98■□□□□ 0.31
LMNB1-201ENST00000261366 ATF2P15336 505 aa16.98■□□□□ 0.31
LMNB1-201ENST00000261366 TUBP50607 506 aa16.98■□□□□ 0.31
LMNB1-201ENST00000261366 CRY2Q49AN0 593 aa16.98■□□□□ 0.31
LMNB1-201ENST00000261366 LMO3Q8TAP4 145 aa16.98■□□□□ 0.31
LMNB1-201ENST00000261366 RBM17Q96I25 401 aaKnown RBP16.98■□□□□ 0.31
LMNB1-201ENST00000261366 NUDCD1Q96RS6 583 aa16.98■□□□□ 0.31
LMNB1-201ENST00000261366 KIAA1683Q9H0B3 1180 aa16.98■□□□□ 0.31
LMNB1-201ENST00000261366 WNT8AQ9H1J5 351 aa16.98■□□□□ 0.31
LMNB1-201ENST00000261366 WDR91A4D1P6 747 aa16.98■□□□□ 0.31
LMNB1-201ENST00000261366 O00370 1275 aa16.98■□□□□ 0.31
LMNB1-201ENST00000261366 GAP43P17677 238 aa16.98■□□□□ 0.31
LMNB1-201ENST00000261366 GBP1P32455 592 aa16.98■□□□□ 0.31
LMNB1-201ENST00000261366 IRX1P78414 480 aaPredicted RBP16.98■□□□□ 0.31
LMNB1-201ENST00000261366 SETDB1Q15047 1291 aa16.98■□□□□ 0.31
LMNB1-201ENST00000261366 ARHGEF18Q6ZSZ5 1173 aa16.98■□□□□ 0.31
LMNB1-201ENST00000261366 CYFIP1Q7L576 1253 aa16.98■□□□□ 0.31
LMNB1-201ENST00000261366 FBXO11Q86XK2 927 aa16.98■□□□□ 0.31
LMNB1-201ENST00000261366 SLF2Q8IX21 1173 aa16.98■□□□□ 0.31
LMNB1-201ENST00000261366 AMNQ9BXJ7 453 aa16.98■□□□□ 0.31
LMNB1-201ENST00000261366 PRKAG3Q9UGI9 489 aa16.98■□□□□ 0.31
LMNB1-201ENST00000261366 ATAD5Q96QE3 1844 aa16.98■□□□□ 0.31
LMNB1-201ENST00000261366 COL24A1Q17RW2 1714 aa16.97■□□□□ 0.31
LMNB1-201ENST00000261366 DPPA5A6NC42 116 aa16.97■□□□□ 0.31
LMNB1-201ENST00000261366 MAP3K13O43283 966 aa16.97■□□□□ 0.31
LMNB1-201ENST00000261366 ATP5DP30049 168 aa16.97■□□□□ 0.31
LMNB1-201ENST00000261366 CTCFP49711 727 aaPredicted RBP16.97■□□□□ 0.31
LMNB1-201ENST00000261366 WDR4P57081 412 aaKnown RBP16.97■□□□□ 0.31
LMNB1-201ENST00000261366 DOK7Q18PE1 504 aa16.97■□□□□ 0.31
LMNB1-201ENST00000261366 ZFYVE27Q5T4F4 411 aa16.97■□□□□ 0.31
LMNB1-201ENST00000261366 CDCA2Q69YH5 1023 aaPredicted RBP16.97■□□□□ 0.31
LMNB1-201ENST00000261366 LONP2Q86WA8 852 aa16.97■□□□□ 0.31
LMNB1-201ENST00000261366 SUPT20HQ8NEM7 779 aa16.97■□□□□ 0.31
LMNB1-201ENST00000261366 EPS8L1Q8TE68 723 aa16.97■□□□□ 0.31
LMNB1-201ENST00000261366 KLHL11Q9NVR0 708 aa16.97■□□□□ 0.31
LMNB1-201ENST00000261366 ANAPC7Q9UJX3 599 aa16.97■□□□□ 0.31
LMNB1-201ENST00000261366 BLMHQ13867 455 aa16.97■□□□□ 0.31
LMNB1-201ENST00000261366 MTFR1Q15390 333 aa16.97■□□□□ 0.31
LMNB1-201ENST00000261366 CNKSR1Q969H4 720 aa16.97■□□□□ 0.31
LMNB1-201ENST00000261366 SNF8Q96H20 258 aa16.97■□□□□ 0.31
LMNB1-201ENST00000261366 ZFATQ9P243 1243 aa16.97■□□□□ 0.31
LMNB1-201ENST00000261366 CHKBQ9Y259 395 aa16.97■□□□□ 0.31
LMNB1-201ENST00000261366 SPDYE5A6NIY4 337 aa16.96■□□□□ 0.31
LMNB1-201ENST00000261366 RRM1P23921 792 aa16.96■□□□□ 0.31
LMNB1-201ENST00000261366 CD101Q93033 1021 aa16.96■□□□□ 0.31
LMNB1-201ENST00000261366 LRRC37BQ96QE4 947 aa16.96■□□□□ 0.31
LMNB1-201ENST00000261366 FIZ1Q96SL8 496 aa16.96■□□□□ 0.31
LMNB1-201ENST00000261366 WDR18Q9BV38 432 aa16.96■□□□□ 0.31
LMNB1-201ENST00000261366 AP1G2O75843 785 aa16.96■□□□□ 0.31
LMNB1-201ENST00000261366 VAMP7P51809 220 aa16.96■□□□□ 0.31
LMNB1-201ENST00000261366 STRN3Q13033 797 aa16.96■□□□□ 0.31
LMNB1-201ENST00000261366 CLUL1Q15846 466 aa16.96■□□□□ 0.31
LMNB1-201ENST00000261366 GSTA5Q7RTV2 222 aa16.96■□□□□ 0.31
LMNB1-201ENST00000261366 FAM13CQ8NE31 585 aa16.96■□□□□ 0.31
LMNB1-201ENST00000261366 CERKQ8TCT0 537 aa16.96■□□□□ 0.31
LMNB1-201ENST00000261366 MAGEB18Q96M61 343 aa16.96■□□□□ 0.31
LMNB1-201ENST00000261366 FAM20AQ96MK3 541 aa16.96■□□□□ 0.31
LMNB1-201ENST00000261366 MBOAT7Q96N66 472 aa16.96■□□□□ 0.31
LMNB1-201ENST00000261366 RPS6KC1Q96S38 1066 aa16.96■□□□□ 0.31
LMNB1-201ENST00000261366 PHTF1Q9UMS5 762 aa16.96■□□□□ 0.31
LMNB1-201ENST00000261366 EIF3DO15371 548 aaKnown RBP eCLIP16.95■□□□□ 0.31e-6■■□□□ 13.3
LMNB1-201ENST00000261366 KRT15P19012 456 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 ATP2B4P23634 1241 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 CETN1Q12798 172 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 Q4G0T1 1027 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 TAB3Q8N5C8 712 aaPredicted RBP16.95■□□□□ 0.3
LMNB1-201ENST00000261366 GAKO14976 1311 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 TMEM150BA6NC51 233 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 GAS7O60861 476 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 HLA-DOAP06340 250 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 BMP3P12645 472 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 KRT5P13647 590 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 IL9RQ01113 521 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 AP3B2Q13367 1082 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 TMEM63BQ5T3F8 832 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 CERS5Q8N5B7 392 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 PLEKHO2Q8TD55 490 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 RAB3IPQ96QF0 476 aaPredicted RBP16.95■□□□□ 0.3
LMNB1-201ENST00000261366 HSD17B14Q9BPX1 270 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 C12orf65Q9H3J6 166 aaKnown RBP16.95■□□□□ 0.3
LMNB1-201ENST00000261366 METTL5Q9NRN9 209 aaKnown RBP16.95■□□□□ 0.3
LMNB1-201ENST00000261366 TXLNGQ9NUQ3 528 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 DCTN4Q9UJW0 460 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 USTQ9Y2C2 406 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 PEX11AO75192 247 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 BBOX1O75936 387 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 ATP4AP20648 1035 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 MAPK4P31152 587 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 SREBF1P36956 1147 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 RASA3Q14644 834 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 CYP1B1Q16678 543 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 KRT27Q7Z3Y8 459 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 CRYGNQ8WXF5 182 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 KREMEN1Q96MU8 473 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 MKNK1Q9BUB5 465 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 TBC1D10AQ9BXI6 508 aa16.95■□□□□ 0.3
LMNB1-201ENST00000261366 ALG13Q9NP73 1137 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms