RNA–Protein interactions for RNA: ENST00000261302.9

FOXN3-201, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FOXN3, Length 2,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-201ENST00000261302 SRBD1Q8N5C6 995 aaKnown RBP13.47□□□□□ -0.25
FOXN3-201ENST00000261302 C7orf43Q8WVR3 580 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 SNX27Q96L92 541 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 TUBB6Q9BUF5 446 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 USP29Q9HBJ7 922 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 GPCPD1Q9NPB8 672 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 PIM2Q9P1W9 311 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 ZFP69BQ9UJL9 534 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 CROTQ9UKG9 612 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 ZNF711Q9Y462 761 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 PCDHA3Q9Y5H8 950 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 ARFGEF1Q9Y6D6 1849 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 LAMB2P55268 1798 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 ATP5J2-PTCD1G3V325 749 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 PODXLO00592 558 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 OPHN1O60890 802 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 YBX3P16989 372 aaKnown RBP eCLIP13.47□□□□□ -0.25
FOXN3-201ENST00000261302 CDC16Q13042 620 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 CLUL1Q15846 466 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 ASIC2Q16515 512 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 MAP7D1Q3KQU3 841 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 KLHL35Q6PF15 583 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 Q6ZNX1 250 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 TMTC3Q6ZXV5 915 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 FAM133AQ8N9E0 248 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 LRRC15Q8TF66 581 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 ERVK-5Q9HDB9 667 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 ACTL7BQ9Y614 415 aa13.47□□□□□ -0.25
FOXN3-201ENST00000261302 E9PBE3 544 aa13.46□□□□□ -0.25
FOXN3-201ENST00000261302 F8W8V4 182 aa13.46□□□□□ -0.25
FOXN3-201ENST00000261302 C2CD2LO14523 706 aa13.46□□□□□ -0.25
FOXN3-201ENST00000261302 MUTP22033 750 aa13.46□□□□□ -0.25
FOXN3-201ENST00000261302 HALP42357 657 aa13.46□□□□□ -0.25
FOXN3-201ENST00000261302 PPP2R5CQ13362 524 aa13.46□□□□□ -0.25
FOXN3-201ENST00000261302 RAPGEF1Q13905 1077 aa13.46□□□□□ -0.25
FOXN3-201ENST00000261302 UBE3CQ15386 1083 aa13.46□□□□□ -0.25
FOXN3-201ENST00000261302 GPR162Q16538 588 aa13.46□□□□□ -0.25
FOXN3-201ENST00000261302 LRRC55Q6ZSA7 311 aa13.46□□□□□ -0.25
FOXN3-201ENST00000261302 TRIM67Q6ZTA4 783 aa13.46□□□□□ -0.25
FOXN3-201ENST00000261302 CLNKQ7Z7G1 428 aa13.46□□□□□ -0.25
FOXN3-201ENST00000261302 BBS5Q8N3I7 341 aa13.46□□□□□ -0.25
FOXN3-201ENST00000261302 CTNNBL1Q8WYA6 563 aaPredicted RBP13.46□□□□□ -0.25
FOXN3-201ENST00000261302 ATAD5Q96QE3 1844 aa13.46□□□□□ -0.25
FOXN3-201ENST00000261302 TMEM110-MUSTN1A8MSY1 372 aa13.46□□□□□ -0.26
FOXN3-201ENST00000261302 AP1G1O43747 822 aa13.46□□□□□ -0.26
FOXN3-201ENST00000261302 EDF1O60869 148 aaKnown RBP13.46□□□□□ -0.26
FOXN3-201ENST00000261302 SERPINB7O75635 380 aa13.46□□□□□ -0.26
FOXN3-201ENST00000261302 TCEA3O75764 348 aa13.46□□□□□ -0.26
FOXN3-201ENST00000261302 TTLL1O95922 423 aa13.46□□□□□ -0.26
FOXN3-201ENST00000261302 ADORA1P30542 326 aa13.46□□□□□ -0.26
FOXN3-201ENST00000261302 VPS41P49754 854 aa13.46□□□□□ -0.26
FOXN3-201ENST00000261302 LRRC63Q05C16 580 aa13.46□□□□□ -0.26
FOXN3-201ENST00000261302 THOC7Q6I9Y2 204 aaKnown RBP13.46□□□□□ -0.26
FOXN3-201ENST00000261302 STYK1Q6J9G0 422 aa13.46□□□□□ -0.26
FOXN3-201ENST00000261302 PIK3AP1Q6ZUJ8 805 aa13.46□□□□□ -0.26
FOXN3-201ENST00000261302 TREML1Q86YW5 311 aa13.46□□□□□ -0.26
FOXN3-201ENST00000261302 ART4Q93070 314 aa13.46□□□□□ -0.26
FOXN3-201ENST00000261302 PTCD3Q96EY7 689 aaKnown RBP13.46□□□□□ -0.26
FOXN3-201ENST00000261302 PRICKLE1Q96MT3 831 aaPredicted RBP13.46□□□□□ -0.26
FOXN3-201ENST00000261302 LGALS13Q9UHV8 139 aa13.46□□□□□ -0.26
FOXN3-201ENST00000261302 TRMT112Q9UI30 125 aaKnown RBP13.46□□□□□ -0.26
FOXN3-201ENST00000261302 NAGPAQ9UK23 515 aa13.46□□□□□ -0.26
FOXN3-201ENST00000261302 NENFQ9UMX5 172 aa13.46□□□□□ -0.26
FOXN3-201ENST00000261302 CCDC88AQ3V6T2 1871 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 ZNF862O60290 1169 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 ANPEPP15144 967 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 UBA7P41226 1012 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 ASIC1P78348 528 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 CRY2Q49AN0 593 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 LRRC8BQ6P9F7 803 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 C1orf228Q6PIY5 440 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 FOXR2Q6PJQ5 311 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 PASD1Q8IV76 773 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 MYOCDQ8IZQ8 938 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 PIP4K2CQ8TBX8 421 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 ZNF398Q8TD17 642 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 MASTLQ96GX5 879 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 ZKSCAN3Q9BRR0 538 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 TCHPQ9BT92 498 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 LSM14BQ9BX40 385 aaKnown RBP13.45□□□□□ -0.26
FOXN3-201ENST00000261302 TAOK3Q9H2K8 898 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 BHMT2Q9H2M3 363 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 CYLDQ9NQC7 956 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 AMFRQ9UKV5 643 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 DDX3YO15523 660 aaKnown RBP13.45□□□□□ -0.26
FOXN3-201ENST00000261302 GRIN3BO60391 1043 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 PDE5AO76074 875 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 PCCAP05165 728 aaPredicted RBP13.45□□□□□ -0.26
FOXN3-201ENST00000261302 GNAT2P19087 354 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 ARFIP2P53365 341 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 WDR4P57081 412 aaKnown RBP13.45□□□□□ -0.26
FOXN3-201ENST00000261302 PTK2Q05397 1052 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 DALRD3Q5D0E6 543 aaKnown RBP13.45□□□□□ -0.26
FOXN3-201ENST00000261302 ZNF362Q5T0B9 420 aaPredicted RBP13.45□□□□□ -0.26
FOXN3-201ENST00000261302 DCAF12L1Q5VU92 463 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 DTHD1Q6ZMT9 781 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 MFSD6Q6ZSS7 791 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 NANOGNBQ7Z5D8 188 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 PHLDB2Q86SQ0 1253 aa13.45□□□□□ -0.26
FOXN3-201ENST00000261302 EBF3Q9H4W6 596 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms