RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 BTBD6Q96KE9 485 aa6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 TUFT1Q9NNX1 390 aa6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 PLCB1Q9NQ66 1216 aa6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 TAB2Q9NYJ8 693 aa6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 RNF14Q9UBS8 474 aa6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 HEATR5BQ9P2D3 2071 aa6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 CHMP2AO43633 222 aa6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 ADCY3O60266 1144 aa6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 SRGAP2O75044 1071 aa6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 CCNE1P24864 410 aa6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 CCT6AP40227 531 aaKnown RBP6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 NCBP1Q09161 790 aaKnown RBP6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 TCEAL1Q15170 157 aa6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 CXCL17Q6UXB2 119 aa6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 PPP4R3CPQ6ZMV5 832 aa6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 FAM160B2Q86V87 743 aa6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 NELFBQ8WX92 580 aa6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 B3GALT6Q96L58 329 aa6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 AK8Q96MA6 479 aa6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 TRAIPQ9BWF2 469 aa6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 NUP62CLQ9H1M0 184 aa6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 JPH1Q9HDC5 661 aaPredicted RBP6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 LRWD1Q9UFC0 647 aa6.21□□□□□ -1.41
TOPBP1-201ENST00000260810 ADAMTS9Q9P2N4 1935 aa6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 ARHGEF17Q96PE2 2063 aaPredicted RBP6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 TMEM62Q0P6H9 643 aa6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 SPRED3Q2MJR0 410 aa6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 PADI6Q6TGC4 694 aa6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 P2RX5Q93086 422 aa6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 CRACR2AQ9BSW2 395 aa6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 NOL6Q9H6R4 1146 aaKnown RBP6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 PDE11AQ9HCR9 933 aa6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 MBD1Q9UIS9 605 aaPredicted RBP6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 KDM3AQ9Y4C1 1321 aa6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 H7C1D1 291 aa6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 ZNF821O75541 412 aaPredicted RBP6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 SGPL1O95470 568 aa6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 CXCL10P02778 98 aa6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 CD48P09326 243 aa6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 FDX1P10109 184 aa6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 SLC4A11Q8NBS3 891 aa6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 R3HDM2Q9Y2K5 976 aaKnown RBP6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 MDC1Q14676 2089 aaKnown RBP6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 LRRC53A6NM62 1247 aa6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 LAD1O00515 517 aa6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 ARRB2P32121 409 aa6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 COPB1P53618 953 aaKnown RBP6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 SNRPNP63162 240 aaKnown RBP6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 ORC2Q13416 577 aaPredicted RBP6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 NAIF1Q69YI7 327 aaPredicted RBP6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 SNX29Q8TEQ0 813 aa6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 SYAP1Q96A49 352 aaPredicted RBP6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 CRTAC1Q9NQ79 661 aa6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 MAP3K20Q9NYL2 800 aaKnown RBP6.21□□□□□ -1.42
TOPBP1-201ENST00000260810 RP1P56715 2156 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 C9IYK1 514 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 CETPP11597 493 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 ACOT2P49753 483 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 RAD23BP54727 409 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 FKBP1BP68106 108 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 SEMA3BQ13214 749 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 KNOP1Q1ED39 458 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 PIAS4Q8N2W9 510 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 A0A087WZ62 844 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 ATMINO43313 823 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 ITGA4P13612 1032 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 UCHL3P15374 230 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 HFE2Q6ZVN8 426 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 KLHDC8BQ8IXV7 354 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 FDXACB1Q9BRP7 624 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 SRRTQ9BXP5 876 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 TANGO6Q9C0B7 1094 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 ISCUQ9H1K1 167 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 VRTNQ9H8Y1 702 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 GPR179Q6PRD1 2367 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 MYOGP15173 224 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 GMPRP36959 345 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 GFPT1Q06210 699 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 PTPRRQ15256 657 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 NFXL1Q6ZNB6 911 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 MON1BQ7L1V2 547 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 MAEAQ7L5Y9 396 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 DMGDHQ9UI17 866 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 FBXL5Q9UKA1 691 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 POLIQ9UNA4 740 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 THADAQ6YHU6 1953 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 ASXL3Q9C0F0 2248 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 PJA2O43164 708 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 OATP04181 439 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 ASGR1P07306 291 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 SMIM10L2AP0DMW4 78 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 SMIM10L2BP0DMW5 78 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 CDH5P33151 784 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 TIAL1Q01085 375 aaKnown RBP eCLIP6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 MAPK8IP2Q13387 824 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 ZXDCQ2QGD7 858 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 NELFCDQ8IXH7 590 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 NETO2Q8NC67 525 aa6.2□□□□□ -1.42
TOPBP1-201ENST00000260810 FAM71BQ8TC56 605 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms