RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 CYBAP13498 195 aa29.85■■■□□ 2.37
CCM2-201ENST00000258781 ZACNQ401N2 412 aa29.85■■■□□ 2.37
CCM2-201ENST00000258781 EFCAB12Q6NXP0 572 aa29.85■■■□□ 2.37
CCM2-201ENST00000258781 ENOSF1Q7L5Y1 443 aa29.85■■■□□ 2.37
CCM2-201ENST00000258781 TLK2Q86UE8 772 aa29.85■■■□□ 2.37
CCM2-201ENST00000258781 ZNF516Q92618 1163 aa29.85■■■□□ 2.37
CCM2-201ENST00000258781 CLDN3O15551 220 aa29.84■■■□□ 2.37
CCM2-201ENST00000258781 SRGAP2O75044 1071 aa29.84■■■□□ 2.37
CCM2-201ENST00000258781 HOXD8P13378 290 aaPredicted RBP29.84■■■□□ 2.37
CCM2-201ENST00000258781 RHPN2Q8IUC4 686 aa29.84■■■□□ 2.37
CCM2-201ENST00000258781 KAT5Q92993 513 aa29.84■■■□□ 2.37
CCM2-201ENST00000258781 ACO2Q99798 780 aaKnown RBP29.84■■■□□ 2.37
CCM2-201ENST00000258781 C16orf70Q9BSU1 422 aa29.84■■■□□ 2.37
CCM2-201ENST00000258781 SRRDQ9UH36 339 aa29.84■■■□□ 2.37
CCM2-201ENST00000258781 PPFIA4O75335 1185 aa29.83■■■□□ 2.37
CCM2-201ENST00000258781 PALMO75781 387 aa29.83■■■□□ 2.37
CCM2-201ENST00000258781 PRPF4BQ13523 1007 aaKnown RBP29.83■■■□□ 2.37
CCM2-201ENST00000258781 CGRRF1Q99675 332 aa29.83■■■□□ 2.37
CCM2-201ENST00000258781 PDE11AQ9HCR9 933 aa29.83■■■□□ 2.37
CCM2-201ENST00000258781 TULP1O00294 542 aaPredicted RBP29.82■■■□□ 2.37
CCM2-201ENST00000258781 MAGEB2O15479 319 aa29.82■■■□□ 2.37
CCM2-201ENST00000258781 C4BPAP04003 597 aaKnown RBP29.82■■■□□ 2.37
CCM2-201ENST00000258781 INSRRP14616 1297 aa29.82■■■□□ 2.37
CCM2-201ENST00000258781 ELNP15502 786 aa29.82■■■□□ 2.37
CCM2-201ENST00000258781 TNNI1P19237 187 aa29.82■■■□□ 2.37
CCM2-201ENST00000258781 GCNT1Q02742 428 aa29.82■■■□□ 2.37
CCM2-201ENST00000258781 ZNF296Q8WUU4 475 aaPredicted RBP29.82■■■□□ 2.37
CCM2-201ENST00000258781 TLR10Q9BXR5 811 aa29.82■■■□□ 2.37
CCM2-201ENST00000258781 NFKBIZQ9BYH8 718 aa29.82■■■□□ 2.37
CCM2-201ENST00000258781 ARGLU1Q9NWB6 273 aaPredicted RBP29.82■■■□□ 2.37
CCM2-201ENST00000258781 SAGE1Q9NXZ1 904 aa29.82■■■□□ 2.37
CCM2-201ENST00000258781 RRP9O43818 475 aaKnown RBP29.82■■■□□ 2.36
CCM2-201ENST00000258781 MFSD14CQ5VZR4 134 aa29.82■■■□□ 2.36
CCM2-201ENST00000258781 OSBPL9Q96SU4 736 aa29.82■■■□□ 2.36
CCM2-201ENST00000258781 NCANO14594 1321 aa29.81■■■□□ 2.36
CCM2-201ENST00000258781 CNTNAP2Q9UHC6 1331 aa29.81■■■□□ 2.36
CCM2-201ENST00000258781 GRID2IPA4D2P6 1211 aa29.81■■■□□ 2.36
CCM2-201ENST00000258781 TMEM253P0C7T8 217 aa29.81■■■□□ 2.36
CCM2-201ENST00000258781 CLCN3P51790 818 aa29.81■■■□□ 2.36
CCM2-201ENST00000258781 GALCP54803 685 aa29.81■■■□□ 2.36
CCM2-201ENST00000258781 WNT7BP56706 349 aa29.81■■■□□ 2.36
CCM2-201ENST00000258781 POU5F1BQ06416 359 aa29.81■■■□□ 2.36
CCM2-201ENST00000258781 ZBTB41Q5SVQ8 909 aa29.81■■■□□ 2.36
CCM2-201ENST00000258781 BRSK2Q8IWQ3 736 aa29.81■■■□□ 2.36
CCM2-201ENST00000258781 PDCL3Q9H2J4 239 aa29.81■■■□□ 2.36
CCM2-201ENST00000258781 FZD8Q9H461 694 aa29.81■■■□□ 2.36
CCM2-201ENST00000258781 A6NJR5 290 aa29.8■■■□□ 2.36
CCM2-201ENST00000258781 TTLL13PA6NNM8 815 aa29.8■■■□□ 2.36
CCM2-201ENST00000258781 FAM189A1O60320 539 aa29.8■■■□□ 2.36
CCM2-201ENST00000258781 AKR1A1P14550 325 aa29.8■■■□□ 2.36
CCM2-201ENST00000258781 ZSCAN20P17040 1043 aaPredicted RBP29.8■■■□□ 2.36
CCM2-201ENST00000258781 PTENP60484 403 aa29.8■■■□□ 2.36
CCM2-201ENST00000258781 MCL1Q07820 350 aa29.8■■■□□ 2.36
CCM2-201ENST00000258781 METTL13Q8N6R0 699 aa29.8■■■□□ 2.36
CCM2-201ENST00000258781 LINC01465Q8N7H1 131 aa29.8■■■□□ 2.36
CCM2-201ENST00000258781 MMS19Q96T76 1030 aa29.8■■■□□ 2.36
CCM2-201ENST00000258781 C1orf112Q9NSG2 853 aa29.8■■■□□ 2.36
CCM2-201ENST00000258781 ACKR2O00590 384 aa29.8■■■□□ 2.36
CCM2-201ENST00000258781 DGKDQ16760 1214 aa29.8■■■□□ 2.36
CCM2-201ENST00000258781 TDRD10Q5VZ19 366 aaKnown RBP29.8■■■□□ 2.36
CCM2-201ENST00000258781 SLC20A1Q8WUM9 679 aa29.8■■■□□ 2.36
CCM2-201ENST00000258781 CAPZA3Q96KX2 299 aa29.8■■■□□ 2.36
CCM2-201ENST00000258781 NOCTQ9UK39 431 aaKnown RBP29.8■■■□□ 2.36
CCM2-201ENST00000258781 DNAH12Q6ZR08 3092 aa29.79■■■□□ 2.36
CCM2-201ENST00000258781 ABLIM1O14639 778 aa29.79■■■□□ 2.36
CCM2-201ENST00000258781 OGTO15294 1046 aa29.79■■■□□ 2.36
CCM2-201ENST00000258781 HLA-DRAP01903 254 aa29.79■■■□□ 2.36
CCM2-201ENST00000258781 USP8P40818 1118 aa29.79■■■□□ 2.36
CCM2-201ENST00000258781 AP3M2P53677 418 aa29.79■■■□□ 2.36
CCM2-201ENST00000258781 CACNB2Q08289 660 aaPredicted RBP29.79■■■□□ 2.36
CCM2-201ENST00000258781 WDR44Q5JSH3 913 aa29.79■■■□□ 2.36
CCM2-201ENST00000258781 MEI1Q5TIA1 1274 aa29.79■■■□□ 2.36
CCM2-201ENST00000258781 TSHZ1Q6ZSZ6 1077 aa29.79■■■□□ 2.36
CCM2-201ENST00000258781 ZNF572Q7Z3I7 529 aaPredicted RBP29.79■■■□□ 2.36
CCM2-201ENST00000258781 CAGE1Q8TC20 777 aa29.79■■■□□ 2.36
CCM2-201ENST00000258781 EPS8L1Q8TE68 723 aa29.79■■■□□ 2.36
CCM2-201ENST00000258781 NLRP4Q96MN2 994 aa29.79■■■□□ 2.36
CCM2-201ENST00000258781 PTPRJQ12913 1337 aa29.79■■■□□ 2.36
CCM2-201ENST00000258781 ZNF185O15231 689 aa29.78■■■□□ 2.36
CCM2-201ENST00000258781 FKTNO75072 461 aa29.78■■■□□ 2.36
CCM2-201ENST00000258781 HSPA6P17066 643 aa29.78■■■□□ 2.36
CCM2-201ENST00000258781 PROZP22891 400 aa29.78■■■□□ 2.36
CCM2-201ENST00000258781 NFRKBQ6P4R8 1299 aa29.78■■■□□ 2.36
CCM2-201ENST00000258781 CREG2Q8IUH2 290 aa29.78■■■□□ 2.36
CCM2-201ENST00000258781 MSANTD4Q8NCY6 345 aa29.78■■■□□ 2.36
CCM2-201ENST00000258781 LMBR1Q8WVP7 490 aa29.78■■■□□ 2.36
CCM2-201ENST00000258781 TATDN2Q93075 761 aa29.78■■■□□ 2.36
CCM2-201ENST00000258781 TCHPQ9BT92 498 aa29.78■■■□□ 2.36
CCM2-201ENST00000258781 UTP3Q9NQZ2 479 aaKnown RBP eCLIP29.78■■■□□ 2.361e-6■■■■■ 98.5
CCM2-201ENST00000258781 H3BRB1 525 aa29.78■■■□□ 2.36
CCM2-201ENST00000258781 NCK2O43639 380 aa29.78■■■□□ 2.36
CCM2-201ENST00000258781 PIK3CAP42336 1068 aa29.78■■■□□ 2.36
CCM2-201ENST00000258781 NOP2P46087 812 aaKnown RBP29.78■■■□□ 2.36
CCM2-201ENST00000258781 IGBP1P78318 339 aa29.78■■■□□ 2.36
CCM2-201ENST00000258781 LMBRD2Q68DH5 695 aaPredicted RBP29.78■■■□□ 2.36
CCM2-201ENST00000258781 TUT1Q9H6E5 874 aaKnown RBP29.78■■■□□ 2.36
CCM2-201ENST00000258781 SEPT11Q9NVA2 429 aaKnown RBP29.78■■■□□ 2.36
CCM2-201ENST00000258781 CYP26A1O43174 497 aa29.77■■■□□ 2.36
CCM2-201ENST00000258781 SGPL1O95470 568 aa29.77■■■□□ 2.36
CCM2-201ENST00000258781 HARSP12081 509 aaKnown RBP29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms