RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 PBKQ96KB5 322 aa14.1□□□□□ -0.15
THSD1-201ENST00000258613 FGD4Q96M96 766 aa14.1□□□□□ -0.15
THSD1-201ENST00000258613 FNBP1Q96RU3 617 aa14.1□□□□□ -0.15
THSD1-201ENST00000258613 TCHPQ9BT92 498 aa14.1□□□□□ -0.15
THSD1-201ENST00000258613 ISCUQ9H1K1 167 aa14.1□□□□□ -0.15
THSD1-201ENST00000258613 APOBEC3GQ9HC16 384 aaKnown RBP14.1□□□□□ -0.15
THSD1-201ENST00000258613 GEMIN8Q9NWZ8 242 aaKnown RBP14.1□□□□□ -0.15
THSD1-201ENST00000258613 OTOFQ9HC10 1997 aa14.1□□□□□ -0.15
THSD1-201ENST00000258613 GRIN3BO60391 1043 aa14.1□□□□□ -0.15
THSD1-201ENST00000258613 VNN1O95497 513 aa14.1□□□□□ -0.15
THSD1-201ENST00000258613 HLA-DRAP01903 254 aa14.1□□□□□ -0.15
THSD1-201ENST00000258613 ECHS1P30084 290 aa14.1□□□□□ -0.15
THSD1-201ENST00000258613 GPC3P51654 580 aa14.1□□□□□ -0.15
THSD1-201ENST00000258613 TNNC1P63316 161 aa14.1□□□□□ -0.15
THSD1-201ENST00000258613 RIOX2Q8IUF8 465 aa14.1□□□□□ -0.15
THSD1-201ENST00000258613 DDX1Q92499 740 aaKnown RBP14.1□□□□□ -0.15
THSD1-201ENST00000258613 MSTO1Q9BUK6 570 aa14.1□□□□□ -0.15
THSD1-201ENST00000258613 RNF14Q9UBS8 474 aa14.1□□□□□ -0.15
THSD1-201ENST00000258613 PNMA2Q9UL42 364 aa14.1□□□□□ -0.15
THSD1-201ENST00000258613 INTUQ9ULD6 942 aa14.1□□□□□ -0.15
THSD1-201ENST00000258613 TRPC6Q9Y210 931 aa14.1□□□□□ -0.15
THSD1-201ENST00000258613 SOCS7O14512 581 aa14.09□□□□□ -0.15
THSD1-201ENST00000258613 POTEJP0CG39 1038 aa14.09□□□□□ -0.15
THSD1-201ENST00000258613 GPC5P78333 572 aa14.09□□□□□ -0.15
THSD1-201ENST00000258613 ZNF394Q53GI3 561 aa14.09□□□□□ -0.15
THSD1-201ENST00000258613 CDCA5Q96FF9 252 aa14.09□□□□□ -0.15
THSD1-201ENST00000258613 EFCC1Q9HA90 598 aa14.09□□□□□ -0.15
THSD1-201ENST00000258613 O00370 1275 aa14.09□□□□□ -0.15
THSD1-201ENST00000258613 P4HA2O15460 535 aa14.09□□□□□ -0.15
THSD1-201ENST00000258613 ATG7O95352 703 aa14.09□□□□□ -0.15
THSD1-201ENST00000258613 CST3P01034 146 aaPredicted RBP14.09□□□□□ -0.15
THSD1-201ENST00000258613 AARSP49588 968 aaKnown RBP eCLIP14.09□□□□□ -0.15
THSD1-201ENST00000258613 HNRNPH2P55795 449 aaKnown RBP14.09□□□□□ -0.15
THSD1-201ENST00000258613 IGBP1P78318 339 aa14.09□□□□□ -0.15
THSD1-201ENST00000258613 SYCE1Q8N0S2 351 aa14.09□□□□□ -0.15
THSD1-201ENST00000258613 CEP120Q8N960 986 aa14.09□□□□□ -0.15
THSD1-201ENST00000258613 DNERQ8NFT8 737 aa14.09□□□□□ -0.15
THSD1-201ENST00000258613 PSPC1Q8WXF1 523 aaKnown RBP14.09□□□□□ -0.15
THSD1-201ENST00000258613 OPTNQ96CV9 577 aa14.09□□□□□ -0.15
THSD1-201ENST00000258613 RBAKQ9NYW8 714 aaPredicted RBP14.09□□□□□ -0.15
THSD1-201ENST00000258613 COQ4Q9Y3A0 265 aa14.09□□□□□ -0.15
THSD1-201ENST00000258613 RTN2O75298 545 aa14.08□□□□□ -0.16
THSD1-201ENST00000258613 PYGMP11217 842 aa14.08□□□□□ -0.16
THSD1-201ENST00000258613 ARL2P36404 184 aa14.08□□□□□ -0.16
THSD1-201ENST00000258613 PIK3CAP42336 1068 aa14.08□□□□□ -0.16
THSD1-201ENST00000258613 PDE6CP51160 858 aa14.08□□□□□ -0.16
THSD1-201ENST00000258613 TTMPQ5BVD1 217 aa14.08□□□□□ -0.16
THSD1-201ENST00000258613 CCDC125Q86Z20 511 aa14.08□□□□□ -0.16
THSD1-201ENST00000258613 PIK3R5Q8WYR1 880 aa14.08□□□□□ -0.16
THSD1-201ENST00000258613 C18orf8Q96DM3 657 aa14.08□□□□□ -0.16
THSD1-201ENST00000258613 CENPHQ9H3R5 247 aa14.08□□□□□ -0.16
THSD1-201ENST00000258613 VIPAS39Q9H9C1 493 aa14.08□□□□□ -0.16
THSD1-201ENST00000258613 B4GALT5O43286 388 aa14.08□□□□□ -0.16
THSD1-201ENST00000258613 EXTL3O43909 919 aa14.08□□□□□ -0.16
THSD1-201ENST00000258613 KCNJ1P48048 391 aa14.08□□□□□ -0.16
THSD1-201ENST00000258613 TMEM270Q6UE05 265 aa14.08□□□□□ -0.16
THSD1-201ENST00000258613 ZNF564Q8TBZ8 553 aaPredicted RBP14.08□□□□□ -0.16
THSD1-201ENST00000258613 CYFIP2Q96F07 1278 aa14.08□□□□□ -0.16
THSD1-201ENST00000258613 FAM118BQ9BPY3 351 aa14.08□□□□□ -0.16
THSD1-201ENST00000258613 A0A0G2JLL6 359 aaPredicted RBP14.07□□□□□ -0.16
THSD1-201ENST00000258613 ANXA13P27216 316 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 GJA5P36382 358 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 UBAP2Q5T6F2 1119 aaKnown RBP14.07□□□□□ -0.16
THSD1-201ENST00000258613 PRRT2Q7Z6L0 340 aaPredicted RBP14.07□□□□□ -0.16
THSD1-201ENST00000258613 RNF149Q8NC42 400 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 TMC2Q8TDI7 906 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 YY1AP1Q9H869 796 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 C17orf75Q9HAS0 396 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 FEZ2Q9UHY8 353 aaPredicted RBP14.07□□□□□ -0.16
THSD1-201ENST00000258613 NUB1Q9Y5A7 615 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 PPP2R3BQ9Y5P8 575 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 MAPK13O15264 365 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 C4BPAP04003 597 aaKnown RBP14.07□□□□□ -0.16
THSD1-201ENST00000258613 CD58P19256 250 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 ICAM3P32942 547 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 IREB2P48200 963 aaKnown RBP14.07□□□□□ -0.16
THSD1-201ENST00000258613 ATP1A2P50993 1020 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 CDR2Q01850 454 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 GLE1Q53GS7 698 aaKnown RBP14.07□□□□□ -0.16
THSD1-201ENST00000258613 RHPN2Q8IUC4 686 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 RASGEF1CQ8N431 466 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 UPF1Q92900 1129 aaKnown RBP eCLIP14.07□□□□□ -0.16
THSD1-201ENST00000258613 NLRP4Q96MN2 994 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 ACBD3Q9H3P7 528 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 MED4Q9NPJ6 270 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 C1orf112Q9NSG2 853 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 CNOT8Q9UFF9 292 aaKnown RBP14.07□□□□□ -0.16
THSD1-201ENST00000258613 NOP56O00567 594 aaKnown RBP14.07□□□□□ -0.16
THSD1-201ENST00000258613 SPOPO43791 374 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 DKC1O60832 514 aaKnown RBP eCLIP14.07□□□□□ -0.16
THSD1-201ENST00000258613 GARTP22102 1010 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 RRM1P23921 792 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 CLCN3P51790 818 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 PAK2Q13177 524 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 EMBQ6PCB8 327 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 THNSL1Q8IYQ7 743 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 EXOC4Q96A65 974 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 PTPN22Q9Y2R2 807 aa14.07□□□□□ -0.16
THSD1-201ENST00000258613 GOLGA6CA6NDK9 693 aa14.06□□□□□ -0.16
THSD1-201ENST00000258613 GOLGA6DP0CG33 693 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms