RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 VTA1Q9NP79 307 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 MID2Q9UJV3 735 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 AFG3L2Q9Y4W6 797 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 PRR23AA6NEV1 266 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 A8MXQ7 604 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 RASA4BC9J798 803 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 MGRN1O60291 552 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 NOS1APO75052 506 aaPredicted RBP7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 CCDC130P13994 396 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 PPP1R2P41236 205 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 NPTX2P47972 431 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 PHC1P78364 1004 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 ATP13A5Q4VNC0 1218 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 ZNF618Q5T7W0 954 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 METTL21CQ5VZV1 264 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 PPP1R2P3Q6NXS1 205 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 PLEKHM3Q6ZWE6 761 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 GALNT4Q8N4A0 578 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 TBATAQ96M53 351 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 FAM213AQ9BRX8 229 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 TRIM31Q9BZY9 425 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 FANCLQ9NW38 375 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 CYP39A1Q9NYL5 469 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 MYPNQ86TC9 1320 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 TNFRSF10AO00220 468 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 CALUO43852 315 aaPredicted RBP7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 SDSP20132 328 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 RFC4P35249 363 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 HNF1BP35680 557 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 SLC34A1Q06495 639 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 ITGADQ13349 1161 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 PTPROQ16827 1216 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 RILPL1Q5EBL4 403 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 TCHHL1Q5QJ38 904 aaPredicted RBP7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 AGBL2Q5U5Z8 902 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 CAMK1DQ8IU85 385 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 SIX6OS1Q8N1H7 587 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 ATL1Q8WXF7 558 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 SLC9A6Q92581 669 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 SERPINI1Q99574 410 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 PYM1Q9BRP8 204 aaKnown RBP7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 EHD1Q9H4M9 534 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 ZNF510Q9Y2H8 683 aa7.12□□□□□ -1.27
PDGFRA-201ENST00000257290 M0QX08 132 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 RASA4O43374 803 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 HLA-DRAP01903 254 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 ASLP04424 464 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 LINGO3P0C6S8 592 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 ALDH5A1P51649 535 aaPredicted RBP7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 PTPN5P54829 565 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 DLG4P78352 724 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 EFR3AQ14156 821 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 CCNG2Q16589 344 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 IZUMO2Q6UXV1 221 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 G2E3Q7L622 706 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 BRF1Q92994 677 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 VPS35Q96QK1 796 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 PDCD10Q9BUL8 212 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 NAPBQ9H115 298 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 POLR3BQ9NW08 1133 aaPredicted RBP7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 TXNDC16Q9P2K2 825 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 RAB21Q9UL25 225 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 CPSF1Q10570 1443 aaKnown RBP7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 NCAPD2Q15021 1401 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 GAKO14976 1311 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 OPLAHO14841 1288 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 KMOO15229 486 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 PGDP52209 483 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 UBE3AQ05086 875 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 ADAM9Q13443 819 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 EGFLAMQ63HQ2 1017 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 CLVS1Q8IUQ0 354 aaPredicted RBP7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 HACE1Q8IYU2 909 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 PYROXD1Q8WU10 500 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 CDCA5Q96FF9 252 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 SPATA16Q9BXB7 569 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 TEX12Q9BXU0 123 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 ZNF717Q9BY31 904 aaPredicted RBP7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 STK33Q9BYT3 514 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 SUGCTQ9HAC7 445 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 ZNF287Q9HBT7 754 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 HPS4Q9NQG7 708 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 FAM53CQ9NYF3 392 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 NFU1Q9UMS0 254 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 DMTF1Q9Y222 760 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 EFR3BQ9Y2G0 817 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 SPO11Q9Y5K1 396 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 AK5Q9Y6K8 562 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 PPLO60437 1756 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 FBP2O00757 339 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 MYCLP12524 364 aaPredicted RBP7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 PGM1P36871 562 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 CDK17Q00537 523 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 GSPT2Q8IYD1 628 aaKnown RBP7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 MLKLQ8NB16 471 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 DDX17Q92841 729 aaKnown RBP7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 RTFDC1Q9BY42 306 aaPredicted RBP7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 RUBCNLQ9H714 662 aa7.11□□□□□ -1.27
PDGFRA-201ENST00000257290 TMEM206Q9H813 350 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms