RNA–Protein interactions for RNA: ENST00000255674.11

RTTN-201, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 6,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-201ENST00000255674 BAG5Q9UL15 447 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 POTECB2RU33 542 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 SPTLC2O15270 562 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 SLC16A3O15427 465 aaKnown RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 EVI5O60447 810 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 CUTAO60888 179 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 TOMM70O94826 608 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 SKILP12757 684 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 ALOX15P16050 662 aaPredicted RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 HSD3B2P26439 372 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 GPR1P46091 355 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 VAV2P52735 878 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 HIF1AQ16665 826 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 TPTE2Q6XPS3 522 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 NIPA2Q8N8Q9 360 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 PDZD8Q8NEN9 1154 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.86□□□□□ -1.79
RTTN-201ENST00000255674 CCDC26Q8TAB7 109 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 TCEANC2Q96MN5 208 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 ZKSCAN3Q9BRR0 538 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 HAUS8Q9BT25 410 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 TRIM9Q9C026 710 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 XPO4Q9C0E2 1151 aaKnown RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 NYXQ9GZU5 481 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 ZFYVE1Q9HBF4 777 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 RIC8AQ9NPQ8 531 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 DDX56Q9NY93 547 aaKnown RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 AKAP7Q9P0M2 348 aaPredicted RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 CPSF2Q9P2I0 782 aaKnown RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 PAXBP1Q9Y5B6 917 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 TRAF5O00463 557 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 BUB1BO60566 1050 aaPredicted RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 PARP1P09874 1014 aaKnown RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 TGFB3P10600 412 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 HSPA6P17066 643 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 MX2P20592 715 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 PTPROQ16827 1216 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 DOK7Q18PE1 504 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 TTC31Q49AM3 519 aaPredicted RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 SLC9C2Q5TAH2 1124 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 ARHGEF16Q5VV41 709 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 ARMC6Q6NXE6 501 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 SKAP1Q86WV1 359 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 RBBP8NLQ8NC74 664 aaPredicted RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 PPHLN1Q8NEY8 458 aaKnown RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 HOXB13Q92826 284 aaPredicted RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 SCYL1Q96KG9 808 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 SUGCTQ9HAC7 445 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 ARHGEF10LQ9HCE6 1279 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 VCX3AQ9NNX9 186 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 CPSF3Q9UKF6 684 aaKnown RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 TRIM75PA6NK02 468 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 ECE2O60344 883 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 PSMD10O75832 226 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 ACADMP11310 421 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 RECQLP46063 649 aaPredicted RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 KPNA1P52294 538 aaPredicted RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 PHEXP78562 749 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 PDE4DQ08499 809 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 GRIK2Q13002 908 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 NR1I3Q14994 352 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 LETM2Q2VYF4 491 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 ADCK5Q3MIX3 580 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 TAF1BQ53T94 588 aaPredicted RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 DALRD3Q5D0E6 543 aaKnown RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 PRSS55Q6UWB4 352 aaPredicted RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 SND1Q7KZF4 910 aaKnown RBP eCLIP3.86□□□□□ -1.79
RTTN-201ENST00000255674 KRT222Q8N1A0 295 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 RNF138Q8WVD3 245 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 NCSTNQ92542 709 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 SH3KBP1Q96B97 665 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 TACO1Q9BSH4 297 aaKnown RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 MIR1-1HGQ9H1L0 117 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 CTTNBP2NLQ9P2B4 639 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 ASIC3Q9UHC3 531 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 SLC13A4Q9UKG4 626 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 EXOC7Q9UPT5 735 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 SERTM1A2A2V5 107 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 HMGB1P1B2RPK0 211 aaPredicted RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 H0YGN5 161 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 PDXKO00764 312 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 FSCN2O14926 492 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 S100BP04271 92 aaPredicted RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 LDHBP07195 334 aaKnown RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 KCNMA1Q12791 1236 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 DNAJC3Q13217 504 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 ANKRD20A2Q5SQ80 823 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 ANKRD20A1Q5TYW2 823 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 ANKRD20A3Q5VUR7 823 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 NCAPH2Q6IBW4 605 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 VSTM4Q8IW00 320 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 FAM76AQ8TAV0 307 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 PDCD6IPQ8WUM4 868 aaKnown RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 MRPS27Q92552 414 aaKnown RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 OTULINQ96BN8 352 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 SPDL1Q96EA4 605 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 CARD6Q9BX69 1037 aa3.86□□□□□ -1.79
RTTN-201ENST00000255674 OXCT2Q9BYC2 517 aaPredicted RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 FRMD8Q9BZ67 464 aaPredicted RBP3.86□□□□□ -1.79
RTTN-201ENST00000255674 DHX33Q9H6R0 707 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms