RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 RPS6KC1Q96S38 1066 aa27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 MSTO1Q9BUK6 570 aa27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 RBAKQ9NYW8 714 aaPredicted RBP27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 RBPJLQ9UBG7 517 aa27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 CHORDC1Q9UHD1 332 aaPredicted RBP27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 GTF3C4Q9UKN8 822 aa27.06■■□□□ 1.92
TMEM55B-201ENST00000250489 ERICH4A6NGS2 130 aa27.05■■□□□ 1.92
TMEM55B-201ENST00000250489 ADCY3O60266 1144 aa27.05■■□□□ 1.92
TMEM55B-201ENST00000250489 ARIH2O95376 493 aa27.05■■□□□ 1.92
TMEM55B-201ENST00000250489 LDHAP00338 332 aaKnown RBP27.05■■□□□ 1.92
TMEM55B-201ENST00000250489 PGK2P07205 417 aa27.05■■□□□ 1.92
TMEM55B-201ENST00000250489 NF2P35240 595 aa27.05■■□□□ 1.92
TMEM55B-201ENST00000250489 PPIL2Q13356 520 aa27.05■■□□□ 1.92
TMEM55B-201ENST00000250489 ZBTB41Q5SVQ8 909 aa27.05■■□□□ 1.92
TMEM55B-201ENST00000250489 MPHOSPH6Q99547 160 aaKnown RBP27.05■■□□□ 1.92
TMEM55B-201ENST00000250489 SH3GL2Q99962 352 aa27.05■■□□□ 1.92
TMEM55B-201ENST00000250489 SPON1Q9HCB6 807 aa27.05■■□□□ 1.92
TMEM55B-201ENST00000250489 ANKFY1Q9P2R3 1169 aa27.05■■□□□ 1.92
TMEM55B-201ENST00000250489 ADGRA2Q96PE1 1338 aa27.05■■□□□ 1.92
TMEM55B-201ENST00000250489 TMEM110-MUSTN1A8MSY1 372 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 LMAN1P49257 510 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 DRP2Q13474 957 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 CUL1Q13616 776 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 MOGSQ13724 837 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 WDR44Q5JSH3 913 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 ACAD10Q6JQN1 1059 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 ZNF653Q96CK0 615 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 FAM167AQ96KS9 214 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 NAP1L3Q99457 506 aaPredicted RBP27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 AMACRQ9UHK6 382 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 PPME1Q9Y570 386 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 HSF2BPO75031 334 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 VNN1O95497 513 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 ECHS1P30084 290 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 COPB2P35606 906 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 PIK3CAP42336 1068 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 GUCY2FP51841 1108 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 ZNF211Q13398 564 aaPredicted RBP27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 MESDQ14696 234 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 CLEC16AQ2KHT3 1053 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 UBL4BQ8N7F7 174 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 CCDC26Q8TAB7 109 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 ZNF564Q8TBZ8 553 aaPredicted RBP27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 MORC4Q8TE76 937 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 ZSWIM1Q9BR11 485 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 NUP85Q9BW27 656 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 AZI2Q9H6S1 392 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 TRPC6Q9Y210 931 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 NR2E1Q9Y466 385 aa27.04■■□□□ 1.92
TMEM55B-201ENST00000250489 COMTP21964 271 aa27.03■■□□□ 1.92
TMEM55B-201ENST00000250489 POU5F1Q01860 360 aaKnown RBP27.03■■□□□ 1.92
TMEM55B-201ENST00000250489 TTLL12Q14166 644 aaPredicted RBP27.03■■□□□ 1.92
TMEM55B-201ENST00000250489 Q3C1V9 767 aa27.03■■□□□ 1.92
TMEM55B-201ENST00000250489 KRT35Q92764 455 aa27.03■■□□□ 1.92
TMEM55B-201ENST00000250489 GPR20Q99678 358 aa27.03■■□□□ 1.92
TMEM55B-201ENST00000250489 BIRC3Q13489 604 aa27.02■■□□□ 1.92
TMEM55B-201ENST00000250489 CLUL1Q15846 466 aa27.02■■□□□ 1.92
TMEM55B-201ENST00000250489 NAA35Q5VZE5 725 aa27.02■■□□□ 1.92
TMEM55B-201ENST00000250489 MAATS1Q7Z4T9 603 aa27.02■■□□□ 1.92
TMEM55B-201ENST00000250489 CGRRF1Q99675 332 aa27.02■■□□□ 1.92
TMEM55B-201ENST00000250489 UVRAGQ9P2Y5 699 aa27.02■■□□□ 1.92
TMEM55B-201ENST00000250489 DNAJC25-GNG10A0A024R161 153 aa27.02■■□□□ 1.92
TMEM55B-201ENST00000250489 CALCAP01258 141 aa27.02■■□□□ 1.92
TMEM55B-201ENST00000250489 MARCKSL1P49006 195 aa27.02■■□□□ 1.92
TMEM55B-201ENST00000250489 KCNV1Q6PIU1 500 aa27.02■■□□□ 1.92
TMEM55B-201ENST00000250489 PRPF31Q8WWY3 499 aaKnown RBP27.02■■□□□ 1.92
TMEM55B-201ENST00000250489 BBXQ8WY36 941 aaPredicted RBP27.02■■□□□ 1.92
TMEM55B-201ENST00000250489 UPF1Q92900 1129 aaKnown RBP eCLIP27.02■■□□□ 1.929e-8■■■■□ 20.8
TMEM55B-201ENST00000250489 CNTNAP2Q9UHC6 1331 aa27.02■■□□□ 1.92
TMEM55B-201ENST00000250489 OPA1O60313 960 aa27.01■■□□□ 1.91
TMEM55B-201ENST00000250489 LGR5O75473 907 aa27.01■■□□□ 1.91
TMEM55B-201ENST00000250489 PTENP60484 403 aa27.01■■□□□ 1.91
TMEM55B-201ENST00000250489 CELF3Q5SZQ8 465 aaKnown RBP27.01■■□□□ 1.91
TMEM55B-201ENST00000250489 CD101Q93033 1021 aa27.01■■□□□ 1.91
TMEM55B-201ENST00000250489 ZIM3Q96PE6 472 aa27.01■■□□□ 1.91
TMEM55B-201ENST00000250489 MMP19Q99542 508 aa27.01■■□□□ 1.91
TMEM55B-201ENST00000250489 WNT8AQ9H1J5 351 aa27.01■■□□□ 1.91
TMEM55B-201ENST00000250489 TTI1O43156 1089 aa27■■□□□ 1.91
TMEM55B-201ENST00000250489 PEX5P50542 639 aa27■■□□□ 1.91
TMEM55B-201ENST00000250489 HLTFQ14527 1009 aaKnown RBP eCLIP27■■□□□ 1.91
TMEM55B-201ENST00000250489 KCTD2Q14681 263 aa27■■□□□ 1.91
TMEM55B-201ENST00000250489 HSDL1Q3SXM5 330 aa27■■□□□ 1.91
TMEM55B-201ENST00000250489 IER5Q5VY09 327 aa27■■□□□ 1.91
TMEM55B-201ENST00000250489 C9orf131Q5VYM1 1079 aa27■■□□□ 1.91
TMEM55B-201ENST00000250489 SPOPLQ6IQ16 392 aa27■■□□□ 1.91
TMEM55B-201ENST00000250489 ZPBP2Q6X784 338 aa27■■□□□ 1.91
TMEM55B-201ENST00000250489 IQCKQ8N0W5 287 aa27■■□□□ 1.91
TMEM55B-201ENST00000250489 GOLGA6L1Q8N7Z2 621 aa27■■□□□ 1.91
TMEM55B-201ENST00000250489 GLG1Q92896 1179 aa27■■□□□ 1.91
TMEM55B-201ENST00000250489 OPTNQ96CV9 577 aa27■■□□□ 1.91
TMEM55B-201ENST00000250489 UNGP13051 313 aaPredicted RBP27■■□□□ 1.91
TMEM55B-201ENST00000250489 MARK3P27448 753 aa27■■□□□ 1.91
TMEM55B-201ENST00000250489 PPP2R5EQ16537 467 aa27■■□□□ 1.91
TMEM55B-201ENST00000250489 DDX42Q86XP3 938 aaKnown RBP eCLIP27■■□□□ 1.91
TMEM55B-201ENST00000250489 TRIM50Q86XT4 487 aa27■■□□□ 1.91
TMEM55B-201ENST00000250489 ZNF677Q86XU0 584 aa27■■□□□ 1.91
TMEM55B-201ENST00000250489 SEC14L1Q92503 715 aa27■■□□□ 1.91
TMEM55B-201ENST00000250489 RUFY1Q96T51 708 aa27■■□□□ 1.91
TMEM55B-201ENST00000250489 CCDC113Q9H0I3 377 aa27■■□□□ 1.91
TMEM55B-201ENST00000250489 PCDHB2Q9Y5E7 798 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms