RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 MICAL1Q8TDZ2 1067 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 RPS6KC1Q96S38 1066 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 RAB17Q9H0T7 212 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 DLATP10515 647 aaKnown RBP10.85□□□□□ -0.67
COPB1-201ENST00000249923 CREB1P16220 341 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 MMP13P45452 471 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 RUFY4Q6ZNE9 571 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 NIPA1Q7RTP0 329 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 PHLDB2Q86SQ0 1253 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 SLC13A5Q86YT5 568 aaPredicted RBP10.85□□□□□ -0.67
COPB1-201ENST00000249923 CCDC13Q8IYE1 715 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 DDX23Q9BUQ8 820 aaKnown RBP10.85□□□□□ -0.67
COPB1-201ENST00000249923 AZI2Q9H6S1 392 aa10.85□□□□□ -0.67
COPB1-201ENST00000249923 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.85□□□□□ -0.67
COPB1-201ENST00000249923 MROH7Q68CQ1 1323 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 FAM187AA6NFU0 413 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 MAPK13O15264 365 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 CLDN3O15551 220 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 GZMAP12544 262 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 FAM102BQ5T8I3 360 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 TBC1D1Q86TI0 1168 aaPredicted RBP10.84□□□□□ -0.67
COPB1-201ENST00000249923 C4orf19Q8IY42 314 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 ATG4AQ8WYN0 398 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 ART4Q93070 314 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 SEC16BQ96JE7 1060 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 FBXL18Q96ME1 805 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 PWWP2AQ96N64 755 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 HAPLN2Q9GZV7 340 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 MIF4GDA9UHW6 222 aaKnown RBP10.84□□□□□ -0.67
COPB1-201ENST00000249923 CHN1P15882 459 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 IVDP26440 423 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 CHRNA3P32297 505 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 CHKAP35790 457 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 COILP38432 576 aaPredicted RBP10.84□□□□□ -0.67
COPB1-201ENST00000249923 GPC3P51654 580 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 SPDYCQ5MJ68 293 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 LMBRD2Q68DH5 695 aaPredicted RBP10.84□□□□□ -0.67
COPB1-201ENST00000249923 TRIM68Q6AZZ1 485 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 SV2AQ7L0J3 742 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 POMGNT1Q8WZA1 660 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 PDCD2LQ9BRP1 358 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 XPNPEP1Q9NQW7 623 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 CHST7Q9NS84 486 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 DNAJC17Q9NVM6 304 aaKnown RBP10.84□□□□□ -0.67
COPB1-201ENST00000249923 TMOD2Q9NZR1 351 aa10.84□□□□□ -0.67
COPB1-201ENST00000249923 RIPK2O43353 540 aa10.83□□□□□ -0.67
COPB1-201ENST00000249923 CDR2Q01850 454 aa10.83□□□□□ -0.67
COPB1-201ENST00000249923 FLAD1Q8NFF5 587 aa10.83□□□□□ -0.67
COPB1-201ENST00000249923 C1orf54Q8WWF1 131 aa10.83□□□□□ -0.67
COPB1-201ENST00000249923 PGM2Q96G03 612 aa10.83□□□□□ -0.67
COPB1-201ENST00000249923 EHMT1Q9H9B1 1298 aa10.83□□□□□ -0.67
COPB1-201ENST00000249923 PXMP2Q9NR77 195 aa10.83□□□□□ -0.67
COPB1-201ENST00000249923 FZD1Q9UP38 647 aa10.83□□□□□ -0.67
COPB1-201ENST00000249923 R3HDM2Q9Y2K5 976 aaKnown RBP10.83□□□□□ -0.67
COPB1-201ENST00000249923 MYPNQ86TC9 1320 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 DENND3A2RUS2 1198 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 EDN1P05305 212 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 MYCLP12524 364 aaPredicted RBP10.83□□□□□ -0.68
COPB1-201ENST00000249923 UNGP13051 313 aaPredicted RBP10.83□□□□□ -0.68
COPB1-201ENST00000249923 ZKSCAN8Q15776 578 aaPredicted RBP10.83□□□□□ -0.68
COPB1-201ENST00000249923 CCDC38Q502W7 563 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 C12orf50Q8NA57 414 aaPredicted RBP10.83□□□□□ -0.68
COPB1-201ENST00000249923 ZNF653Q96CK0 615 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 MFSD14AQ96MC6 490 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 XPO6Q96QU8 1125 aaKnown RBP10.83□□□□□ -0.68
COPB1-201ENST00000249923 FAM129AQ9BZQ8 928 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 PDLIM7Q9NR12 457 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 GGA2Q9UJY4 613 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 GOLGA6L10A0A0M3HER8 536 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 RASSF9O75901 435 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 TRAF1Q13077 416 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 XKR9Q5GH70 373 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 KRT39Q6A163 491 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 RHBDF2Q6PJF5 856 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 C15orf39Q6ZRI6 1047 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 OTUD6AQ7L8S5 288 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 FAM83AQ86UY5 434 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 CEP89Q96ST8 783 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 KCNK9Q9NPC2 374 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 GTF3C4Q9UKN8 822 aa10.83□□□□□ -0.68
COPB1-201ENST00000249923 SORBS3O60504 671 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 UPP2O95045 317 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 ASNSP08243 561 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 CYP24A1Q07973 514 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 AUHQ13825 339 aaKnown RBP10.82□□□□□ -0.68
COPB1-201ENST00000249923 SUGP1Q8IWZ8 645 aaKnown RBP10.82□□□□□ -0.68
COPB1-201ENST00000249923 UBL4BQ8N7F7 174 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 ANKRD42Q8N9B4 389 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 NAP1L3Q99457 506 aaPredicted RBP10.82□□□□□ -0.68
COPB1-201ENST00000249923 FAM118BQ9BPY3 351 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 TMEM8AQ9HCN3 771 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 KLC4Q9NSK0 619 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 CTNNAL1Q9UBT7 734 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 CCDC169A6NNP5 214 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 ITGBL1O95965 494 aaPredicted RBP10.82□□□□□ -0.68
COPB1-201ENST00000249923 SSTR3P32745 418 aaPredicted RBP10.82□□□□□ -0.68
COPB1-201ENST00000249923 ERFP50548 548 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 PSMC5P62195 406 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 ALCAMQ13740 583 aa10.82□□□□□ -0.68
COPB1-201ENST00000249923 ANKRD20A8PQ5CZ79 823 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms