RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 ANGPTL2Q9UKU9 493 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 ARFGEF2Q9Y6D5 1785 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 CRCPO75575 148 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 RPL21P46778 160 aaKnown RBP4.9□□□□□ -1.63
VPS13C-201ENST00000249837 SLC17A8Q8NDX2 589 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 CCT6BQ92526 530 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 ERP27Q96DN0 273 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 ADPGKQ9BRR6 497 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 POLR3CQ9BUI4 534 aaPredicted RBP4.9□□□□□ -1.63
VPS13C-201ENST00000249837 SLC38A10Q9HBR0 1119 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 CLEC11AQ9Y240 323 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 ZBTB39O15060 712 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 GJB6O95452 261 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 TMC3Q7Z5M5 1100 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 CRLF3Q8IUI8 442 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 ACTRT1Q8TDG2 376 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 HAS1Q92839 578 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 TUBB6Q9BUF5 446 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 KRT10P13645 584 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 SOX10P56693 466 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 SNX16P57768 344 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 NR1H3Q13133 447 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 ALCAMQ13740 583 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 SLC27A3Q5K4L6 730 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 AP1ARQ63HQ0 302 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 ATP2A3Q93084 1043 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 DNAJC19Q96DA6 116 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 TOPORSQ9NS56 1045 aaPredicted RBP4.9□□□□□ -1.63
VPS13C-201ENST00000249837 POLLQ9UGP5 575 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 HEY1Q9Y5J3 304 aa4.9□□□□□ -1.63
VPS13C-201ENST00000249837 PPP6R3Q5H9R7 873 aaPredicted RBP4.89□□□□□ -1.63
VPS13C-201ENST00000249837 DCAF15Q66K64 600 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 TSC22D3Q99576 134 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 SCINQ9Y6U3 715 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 PSAPP07602 524 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 DRD4P21917 467 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 EPHB1P54762 984 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 SPP2Q13103 211 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 GEN1Q17RS7 908 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 SHROOM1Q2M3G4 852 aaPredicted RBP4.89□□□□□ -1.63
VPS13C-201ENST00000249837 ENOSF1Q7L5Y1 443 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 GANQ9H2C0 597 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 TUFT1Q9NNX1 390 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 ABCF3Q9NUQ8 709 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 RRM1P23921 792 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 ANKRD20A8PQ5CZ79 823 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 GBP7Q8N8V2 638 aaPredicted RBP4.89□□□□□ -1.63
VPS13C-201ENST00000249837 KRT35Q92764 455 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 KAT5Q92993 513 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 CDHR1Q96JP9 859 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 TTC1Q99614 292 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 OSBPL1AQ9BXW6 950 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 SNX25Q9H3E2 840 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 UNC45AQ9H3U1 944 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 SPATS2LQ9NUQ6 558 aaKnown RBP4.89□□□□□ -1.63
VPS13C-201ENST00000249837 AKAP11Q9UKA4 1901 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 ATRNO75882 1429 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 PITPNM2Q9BZ72 1349 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 SCN11AQ9UI33 1791 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 NDC80O14777 642 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 TRPA1O75762 1119 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 CHRNA5P30532 468 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 PSMC5P62195 406 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 KCNA1Q09470 495 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 ARSHQ5FYA8 562 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 IRF2BP2Q7Z5L9 587 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 CCNYQ8ND76 341 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 MORC4Q8TE76 937 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 SPDL1Q96EA4 605 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 AGBL1Q96MI9 1066 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 TRAIPQ9BWF2 469 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 RBAKQ9NYW8 714 aaPredicted RBP4.89□□□□□ -1.63
VPS13C-201ENST00000249837 FANCGO15287 622 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 RARAP10276 462 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 RALAP11233 206 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 TAS1R2Q8TE23 839 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.89□□□□□ -1.63
VPS13C-201ENST00000249837 ZSWIM1Q9BR11 485 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 NUF2Q9BZD4 464 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 RPS6KA5O75582 802 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 SHMT1P34896 483 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 BAATQ14032 418 aaPredicted RBP4.89□□□□□ -1.63
VPS13C-201ENST00000249837 RBBP5Q15291 538 aaKnown RBP4.89□□□□□ -1.63
VPS13C-201ENST00000249837 ACAD10Q6JQN1 1059 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 NT5DC3Q86UY8 548 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 RBBP8NLQ8NC74 664 aaPredicted RBP4.89□□□□□ -1.63
VPS13C-201ENST00000249837 FAF2Q96CS3 445 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 INPP4AQ96PE3 977 aaPredicted RBP4.89□□□□□ -1.63
VPS13C-201ENST00000249837 NEU2Q9Y3R4 380 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 CAMTA1Q9Y6Y1 1673 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 OVGP1Q12889 678 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 PTF1AQ7RTS3 328 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 CDC42EP4Q9H3Q1 356 aaKnown RBP4.89□□□□□ -1.63
VPS13C-201ENST00000249837 ZNF408Q9H9D4 720 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 TAF1P21675 1872 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 E2F8A0AVK6 867 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 EIF3DO15371 548 aaKnown RBP eCLIP4.89□□□□□ -1.635e-6■□□□□ 8.9
VPS13C-201ENST00000249837 ANP32DO95626 131 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 PYGMP11217 842 aa4.89□□□□□ -1.63
VPS13C-201ENST00000249837 GRAMD1BQ3KR37 738 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms