RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 GYS1P13807 737 aa17.99■□□□□ 0.47
SGPP1-201ENST00000247225 CA4P22748 312 aa17.99■□□□□ 0.47
SGPP1-201ENST00000247225 CYP3A7P24462 503 aa17.99■□□□□ 0.47
SGPP1-201ENST00000247225 PEX5P50542 639 aa17.99■□□□□ 0.47
SGPP1-201ENST00000247225 Q4G0T1 1027 aa17.99■□□□□ 0.47
SGPP1-201ENST00000247225 IZUMO3Q5VZ72 239 aa17.99■□□□□ 0.47
SGPP1-201ENST00000247225 VSTM1Q6UX27 236 aa17.99■□□□□ 0.47
SGPP1-201ENST00000247225 DCAF4Q8WV16 495 aa17.99■□□□□ 0.47
SGPP1-201ENST00000247225 ARL2BPQ9Y2Y0 163 aa17.99■□□□□ 0.47
SGPP1-201ENST00000247225 SMCHD1A6NHR9 2005 aa17.99■□□□□ 0.47
SGPP1-201ENST00000247225 NCANO14594 1321 aa17.98■□□□□ 0.47
SGPP1-201ENST00000247225 ALAS1P13196 640 aa17.98■□□□□ 0.47
SGPP1-201ENST00000247225 CYP11B1P15538 503 aa17.98■□□□□ 0.47
SGPP1-201ENST00000247225 TNNI1P19237 187 aa17.98■□□□□ 0.47
SGPP1-201ENST00000247225 DGKZQ13574 1117 aa17.98■□□□□ 0.47
SGPP1-201ENST00000247225 SEZ6Q53EL9 994 aa17.98■□□□□ 0.47
SGPP1-201ENST00000247225 POLR3CQ9BUI4 534 aaPredicted RBP17.98■□□□□ 0.47
SGPP1-201ENST00000247225 GHRP10912 638 aa17.98■□□□□ 0.47
SGPP1-201ENST00000247225 ITIH4Q14624 930 aa17.98■□□□□ 0.47
SGPP1-201ENST00000247225 DAW1Q8N136 415 aa17.98■□□□□ 0.47
SGPP1-201ENST00000247225 SEC14L1Q92503 715 aa17.98■□□□□ 0.47
SGPP1-201ENST00000247225 CCDC77Q9BR77 488 aa17.98■□□□□ 0.47
SGPP1-201ENST00000247225 COA1Q9GZY4 146 aa17.98■□□□□ 0.47
SGPP1-201ENST00000247225 WNT8AQ9H1J5 351 aa17.98■□□□□ 0.47
SGPP1-201ENST00000247225 ATP6V0A4Q9HBG4 840 aa17.98■□□□□ 0.47
SGPP1-201ENST00000247225 TESPA1A2RU30 521 aaPredicted RBP17.98■□□□□ 0.47
SGPP1-201ENST00000247225 P3H1Q32P28 736 aa17.98■□□□□ 0.47
SGPP1-201ENST00000247225 ZC3H3Q8IXZ2 948 aaKnown RBP17.98■□□□□ 0.47
SGPP1-201ENST00000247225 FBF1Q8TES7 1133 aa17.98■□□□□ 0.47
SGPP1-201ENST00000247225 A1CFQ9NQ94 594 aaKnown RBP17.98■□□□□ 0.47
SGPP1-201ENST00000247225 METTL5Q9NRN9 209 aaKnown RBP17.98■□□□□ 0.47
SGPP1-201ENST00000247225 NINJ2Q9NZG7 142 aa17.98■□□□□ 0.47
SGPP1-201ENST00000247225 FAM198AQ9UFP1 575 aa17.98■□□□□ 0.47
SGPP1-201ENST00000247225 SLC12A4Q9UP95 1085 aa17.98■□□□□ 0.47
SGPP1-201ENST00000247225 DIS3Q9Y2L1 958 aaKnown RBP17.98■□□□□ 0.47
SGPP1-201ENST00000247225 ARAP2Q8WZ64 1704 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 GTPBP10A4D1E9 387 aaKnown RBP17.97■□□□□ 0.47
SGPP1-201ENST00000247225 FOXN2P32314 431 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 MFAP3P55082 362 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 FMO1Q01740 532 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 C3orf20Q8ND61 904 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 OLIG1Q8TAK6 271 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 RBM15Q96T37 977 aaKnown RBP eCLIP17.97■□□□□ 0.47
SGPP1-201ENST00000247225 FAM213AQ9BRX8 229 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 AAASQ9NRG9 546 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 DOT1LQ8TEK3 1739 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 RAD23BP54727 409 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 FASTKD3Q14CZ7 662 aaKnown RBP17.97■□□□□ 0.47
SGPP1-201ENST00000247225 ART4Q93070 314 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 NT5C1BQ96P26 610 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 PLVAPQ9BX97 442 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 GLIS2Q9BZE0 524 aaPredicted RBP17.97■□□□□ 0.47
SGPP1-201ENST00000247225 SAE1Q9UBE0 346 aaPredicted RBP17.97■□□□□ 0.47
SGPP1-201ENST00000247225 TTC4O95801 387 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 SMAD1Q15797 465 aaKnown RBP17.97■□□□□ 0.47
SGPP1-201ENST00000247225 CCDC6Q16204 474 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 HHATQ5VTY9 493 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 TMEM179Q6ZVK1 233 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 DTX3LQ8TDB6 740 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 SNF8Q96H20 258 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 ACCSQ96QU6 501 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 MYLK2Q9H1R3 596 aa17.97■□□□□ 0.47
SGPP1-201ENST00000247225 ZMYND8Q9ULU4 1186 aaPredicted RBP17.97■□□□□ 0.47
SGPP1-201ENST00000247225 CCDC88AQ3V6T2 1871 aa17.96■□□□□ 0.47
SGPP1-201ENST00000247225 CTNNA2P26232 953 aa17.96■□□□□ 0.47
SGPP1-201ENST00000247225 KIF22Q14807 665 aa17.96■□□□□ 0.47
SGPP1-201ENST00000247225 SNRNP35Q16560 246 aaKnown RBP17.96■□□□□ 0.47
SGPP1-201ENST00000247225 GNPTABQ3T906 1256 aa17.96■□□□□ 0.47
SGPP1-201ENST00000247225 CYFIP1Q7L576 1253 aa17.96■□□□□ 0.47
SGPP1-201ENST00000247225 ECHDC2Q86YB7 292 aa17.96■□□□□ 0.47
SGPP1-201ENST00000247225 CDAN1Q8IWY9 1227 aa17.96■□□□□ 0.47
SGPP1-201ENST00000247225 GLIS1Q8NBF1 620 aa17.96■□□□□ 0.47
SGPP1-201ENST00000247225 IL31RAQ8NI17 732 aa17.96■□□□□ 0.47
SGPP1-201ENST00000247225 CENPTQ96BT3 561 aa17.96■□□□□ 0.47
SGPP1-201ENST00000247225 NPHS2Q9NP85 383 aa17.96■□□□□ 0.47
SGPP1-201ENST00000247225 NKX1-2Q9UD57 310 aaPredicted RBP17.96■□□□□ 0.47
SGPP1-201ENST00000247225 A0A0G2JND7 137 aa17.96■□□□□ 0.47
SGPP1-201ENST00000247225 TBX3O15119 743 aa17.96■□□□□ 0.47
SGPP1-201ENST00000247225 CFHP08603 1231 aa17.96■□□□□ 0.47
SGPP1-201ENST00000247225 PLS3P13797 630 aa17.96■□□□□ 0.47
SGPP1-201ENST00000247225 CCNHP51946 323 aaPredicted RBP17.96■□□□□ 0.47
SGPP1-201ENST00000247225 ZBTB16Q05516 673 aa17.96■□□□□ 0.47
SGPP1-201ENST00000247225 BMT2Q1RMZ1 405 aa17.96■□□□□ 0.47
SGPP1-201ENST00000247225 LONP2Q86WA8 852 aa17.96■□□□□ 0.47
SGPP1-201ENST00000247225 ZNF570Q96NI8 536 aa17.96■□□□□ 0.47
SGPP1-201ENST00000247225 PCYOX1Q9UHG3 505 aa17.96■□□□□ 0.47
SGPP1-201ENST00000247225 IGLV3-22A0A075B6J6 115 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 EIF3DO15371 548 aaKnown RBP eCLIP17.95■□□□□ 0.46
SGPP1-201ENST00000247225 PSMD10O75832 226 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 ATP2A2P16615 1042 aaKnown RBP17.95■□□□□ 0.46
SGPP1-201ENST00000247225 RC3H1Q5TC82 1133 aaKnown RBP17.95■□□□□ 0.46
SGPP1-201ENST00000247225 BZW1Q7L1Q6 419 aaKnown RBP17.95■□□□□ 0.46
SGPP1-201ENST00000247225 DPH6Q7L8W6 267 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 NENFQ9UMX5 172 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 SUGT1Q9Y2Z0 365 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 CTDP1Q9Y5B0 961 aaPredicted RBP17.95■□□□□ 0.46
SGPP1-201ENST00000247225 AFF2P51816 1311 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 HNRNPDLO14979 420 aaKnown RBP17.95■□□□□ 0.46
SGPP1-201ENST00000247225 ARHGEF18Q6ZSZ5 1173 aa17.95■□□□□ 0.46
SGPP1-201ENST00000247225 ZBED8Q8IZ13 594 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms