RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 DPY19L2Q6NUT2 758 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 C15orf39Q6ZRI6 1047 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 USP50Q70EL3 339 aaPredicted RBP16.24■□□□□ 0.19
DDX49-201ENST00000247003 ZBTB8OSQ8IWT0 167 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 CASKIN2Q8WXE0 1202 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 BBXQ8WY36 941 aaPredicted RBP16.24■□□□□ 0.19
DDX49-201ENST00000247003 TATDN2Q93075 761 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 TRIM11Q96F44 468 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 CLMNQ96JQ2 1002 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 RPS6KC1Q96S38 1066 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 PCDHB18PQ96TA0 734 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 PI4K2AQ9BTU6 479 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 KCNH4Q9UQ05 1017 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 ALG6Q9Y672 507 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 ADCY3O60266 1144 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 HLA-DRAP01903 254 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 HSPA6P17066 643 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 CAPSQ13938 189 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 MESDQ14696 234 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 TARBP2Q15633 366 aaKnown RBP16.24■□□□□ 0.19
DDX49-201ENST00000247003 LY6KQ17RY6 165 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 WDR78Q5VTH9 848 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 LMBRD2Q68DH5 695 aaPredicted RBP16.24■□□□□ 0.19
DDX49-201ENST00000247003 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.24■□□□□ 0.19
DDX49-201ENST00000247003 PCYT2Q99447 389 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 CGRRF1Q99675 332 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 JPH2Q9BR39 696 aaPredicted RBP16.24■□□□□ 0.19
DDX49-201ENST00000247003 NUP85Q9BW27 656 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 TARS2Q9BW92 718 aaKnown RBP16.24■□□□□ 0.19
DDX49-201ENST00000247003 IMPG2Q9BZV3 1241 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 WNT8AQ9H1J5 351 aa16.24■□□□□ 0.19
DDX49-201ENST00000247003 UTP11Q9Y3A2 253 aaKnown RBP16.24■□□□□ 0.19
DDX49-201ENST00000247003 ZC3H4Q9UPT8 1303 aaKnown RBP16.24■□□□□ 0.19
DDX49-201ENST00000247003 SPOPO43791 374 aa16.23■□□□□ 0.19
DDX49-201ENST00000247003 CNMDO75829 334 aa16.23■□□□□ 0.19
DDX49-201ENST00000247003 CYP1A2P05177 515 aa16.23■□□□□ 0.19
DDX49-201ENST00000247003 POTEJP0CG39 1038 aa16.23■□□□□ 0.19
DDX49-201ENST00000247003 PPFIA1Q13136 1202 aa16.23■□□□□ 0.19
DDX49-201ENST00000247003 MXD4Q14582 209 aaPredicted RBP16.23■□□□□ 0.19
DDX49-201ENST00000247003 CFAP58Q5T655 872 aa16.23■□□□□ 0.19
DDX49-201ENST00000247003 IER5Q5VY09 327 aa16.23■□□□□ 0.19
DDX49-201ENST00000247003 ACAD10Q6JQN1 1059 aa16.23■□□□□ 0.19
DDX49-201ENST00000247003 ZPBP2Q6X784 338 aa16.23■□□□□ 0.19
DDX49-201ENST00000247003 ARMC9Q7Z3E5 817 aa16.23■□□□□ 0.19
DDX49-201ENST00000247003 MREGQ8N565 214 aa16.23■□□□□ 0.19
DDX49-201ENST00000247003 DHX38Q92620 1227 aaKnown RBP16.23■□□□□ 0.19
DDX49-201ENST00000247003 OPTNQ96CV9 577 aa16.23■□□□□ 0.19
DDX49-201ENST00000247003 CEP89Q96ST8 783 aa16.23■□□□□ 0.19
DDX49-201ENST00000247003 ZSWIM1Q9BR11 485 aa16.23■□□□□ 0.19
DDX49-201ENST00000247003 RAB17Q9H0T7 212 aa16.23■□□□□ 0.19
DDX49-201ENST00000247003 MROH8Q9H579 483 aa16.23■□□□□ 0.19
DDX49-201ENST00000247003 PCDHB2Q9Y5E7 798 aa16.23■□□□□ 0.19
DDX49-201ENST00000247003 A0A0B4J269 797 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 GOLGA6CA6NDK9 693 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 CLDN3O15551 220 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 ATMINO43313 823 aaPredicted RBP16.22■□□□□ 0.19
DDX49-201ENST00000247003 C4BPAP04003 597 aaKnown RBP16.22■□□□□ 0.19
DDX49-201ENST00000247003 GOLGA6DP0CG33 693 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 HARSP12081 509 aaKnown RBP16.22■□□□□ 0.19
DDX49-201ENST00000247003 TBXAS1P24557 533 aaPredicted RBP16.22■□□□□ 0.19
DDX49-201ENST00000247003 GUCY2FP51841 1108 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 AP3M2P53677 418 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 CLEC16AQ2KHT3 1053 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 TDRD10Q5VZ19 366 aaKnown RBP16.22■□□□□ 0.19
DDX49-201ENST00000247003 LEKR1Q6ZMV7 388 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 ZC3H15Q8WU90 426 aaKnown RBP16.22■□□□□ 0.19
DDX49-201ENST00000247003 PLVAPQ9BX97 442 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 MRPL4Q9BYD3 311 aaKnown RBP16.22■□□□□ 0.19
DDX49-201ENST00000247003 ACP6Q9NPH0 428 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 GOLGA6AQ9NYA3 693 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 AMACRQ9UHK6 382 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 AGPSO00116 658 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 PGK2P07205 417 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 MYBL1P10243 752 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 MARK3P27448 753 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 PTENP60484 403 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 ERVK-9P63128 1117 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 CELF3Q5SZQ8 465 aaKnown RBP16.22■□□□□ 0.19
DDX49-201ENST00000247003 DCAF12L1Q5VU92 463 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 C9orf131Q5VYM1 1079 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 DHX37Q8IY37 1157 aaKnown RBP16.22■□□□□ 0.19
DDX49-201ENST00000247003 FAM76AQ8TAV0 307 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 RIN2Q8WYP3 895 aaPredicted RBP16.22■□□□□ 0.19
DDX49-201ENST00000247003 ZNF516Q92618 1163 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 C2orf40Q9H1Z8 148 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 FAM114A2Q9NRY5 505 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 CNOT8Q9UFF9 292 aaKnown RBP16.22■□□□□ 0.19
DDX49-201ENST00000247003 RASAL2Q9UJF2 1139 aa16.22■□□□□ 0.19
DDX49-201ENST00000247003 LOC102724159A0A0B4J2E5 919 aa16.21■□□□□ 0.19
DDX49-201ENST00000247003 ITGA4P13612 1032 aa16.21■□□□□ 0.19
DDX49-201ENST00000247003 YBX3P16989 372 aaKnown RBP eCLIP16.21■□□□□ 0.192e-6■□□□□ 8.6
DDX49-201ENST00000247003 COMTP21964 271 aa16.21■□□□□ 0.19
DDX49-201ENST00000247003 SLC26A2P50443 739 aa16.21■□□□□ 0.19
DDX49-201ENST00000247003 ZNF211Q13398 564 aaPredicted RBP16.21■□□□□ 0.19
DDX49-201ENST00000247003 CUL2Q13617 745 aa16.21■□□□□ 0.19
DDX49-201ENST00000247003 PWP2Q15269 919 aaKnown RBP16.21■□□□□ 0.19
DDX49-201ENST00000247003 NAA35Q5VZE5 725 aa16.21■□□□□ 0.19
DDX49-201ENST00000247003 PPP1R2P3Q6NXS1 205 aa16.21■□□□□ 0.19
DDX49-201ENST00000247003 CRELD2Q6UXH1 353 aaPredicted RBP16.21■□□□□ 0.19
DDX49-201ENST00000247003 PLPPR4Q7Z2D5 763 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms