RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 GARTP22102 1010 aa18.64■□□□□ 0.57
LRFN3-201ENST00000246529 PTGIRP43119 386 aa18.64■□□□□ 0.57
LRFN3-201ENST00000246529 PLTPP55058 493 aa18.64■□□□□ 0.57
LRFN3-201ENST00000246529 GNPTABQ3T906 1256 aa18.64■□□□□ 0.57
LRFN3-201ENST00000246529 CNOT8Q9UFF9 292 aaKnown RBP18.64■□□□□ 0.57
LRFN3-201ENST00000246529 GTF3C4Q9UKN8 822 aa18.64■□□□□ 0.57
LRFN3-201ENST00000246529 HMGB1P1B2RPK0 211 aaPredicted RBP18.63■□□□□ 0.57
LRFN3-201ENST00000246529 C19orf81C9J6K1 198 aa18.63■□□□□ 0.57
LRFN3-201ENST00000246529 DKC1O60832 514 aaKnown RBP eCLIP18.63■□□□□ 0.57
LRFN3-201ENST00000246529 GTF2H1P32780 548 aa18.63■□□□□ 0.57
LRFN3-201ENST00000246529 XKR3Q5GH77 459 aa18.63■□□□□ 0.57
LRFN3-201ENST00000246529 SCARA3Q6AZY7 606 aa18.63■□□□□ 0.57
LRFN3-201ENST00000246529 ACAD10Q6JQN1 1059 aa18.63■□□□□ 0.57
LRFN3-201ENST00000246529 CPA5Q8WXQ8 436 aa18.63■□□□□ 0.57
LRFN3-201ENST00000246529 DCDC2CA8MYV0 355 aa18.63■□□□□ 0.57
LRFN3-201ENST00000246529 KIAA0391O15091 583 aaKnown RBP18.63■□□□□ 0.57
LRFN3-201ENST00000246529 TNNI1P19237 187 aa18.63■□□□□ 0.57
LRFN3-201ENST00000246529 CLEC16AQ2KHT3 1053 aa18.63■□□□□ 0.57
LRFN3-201ENST00000246529 SEZ6Q53EL9 994 aa18.63■□□□□ 0.57
LRFN3-201ENST00000246529 UBAP2Q5T6F2 1119 aaKnown RBP18.63■□□□□ 0.57
LRFN3-201ENST00000246529 SEL1L2Q5TEA6 688 aa18.63■□□□□ 0.57
LRFN3-201ENST00000246529 ZDHHC24Q6UX98 284 aa18.63■□□□□ 0.57
LRFN3-201ENST00000246529 CDHR1Q96JP9 859 aa18.63■□□□□ 0.57
LRFN3-201ENST00000246529 WNT8AQ9H1J5 351 aa18.63■□□□□ 0.57
LRFN3-201ENST00000246529 PTPN22Q9Y2R2 807 aa18.63■□□□□ 0.57
LRFN3-201ENST00000246529 LRRIQ4A6NIV6 560 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 EXTL3O43909 919 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 EDN1P05305 212 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 CFHP08603 1231 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 CTNNA2P26232 953 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 KCNJ1P48048 391 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 RTP1P59025 263 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 DAB2IPQ5VWQ8 1189 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 TDRD10Q5VZ19 366 aaKnown RBP18.62■□□□□ 0.57
LRFN3-201ENST00000246529 C15orf39Q6ZRI6 1047 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 USP37Q86T82 979 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 FBXO25Q8TCJ0 367 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 CNKSR2Q8WXI2 1034 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 ZNF302Q9NR11 478 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 C1orf112Q9NSG2 853 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 AFG3L2Q9Y4W6 797 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 SSC5DA1L4H1 1573 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 ATP2A1O14983 1001 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 GLRA2P23416 452 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 LSP1P33241 339 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 DHX34Q14147 1143 aaKnown RBP18.62■□□□□ 0.57
LRFN3-201ENST00000246529 TREML2Q5T2D2 321 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 CCDC137Q6PK04 289 aaKnown RBP18.62■□□□□ 0.57
LRFN3-201ENST00000246529 APOBEC3FQ8IUX4 373 aaKnown RBP18.62■□□□□ 0.57
LRFN3-201ENST00000246529 ANKFY1Q9P2R3 1169 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 PCDHA3Q9Y5H8 950 aa18.62■□□□□ 0.57
LRFN3-201ENST00000246529 FAM187AA6NFU0 413 aa18.61■□□□□ 0.57
LRFN3-201ENST00000246529 HLA-DRAP01903 254 aa18.61■□□□□ 0.57
LRFN3-201ENST00000246529 RARAP10276 462 aa18.61■□□□□ 0.57
LRFN3-201ENST00000246529 RPL21P46778 160 aaKnown RBP18.61■□□□□ 0.57
LRFN3-201ENST00000246529 HIRAP54198 1017 aaPredicted RBP18.61■□□□□ 0.57
LRFN3-201ENST00000246529 GCNT1Q02742 428 aa18.61■□□□□ 0.57
LRFN3-201ENST00000246529 BIRC3Q13489 604 aa18.61■□□□□ 0.57
LRFN3-201ENST00000246529 MTMR3Q13615 1198 aa18.61■□□□□ 0.57
LRFN3-201ENST00000246529 CRELD2Q6UXH1 353 aaPredicted RBP18.61■□□□□ 0.57
LRFN3-201ENST00000246529 SLC13A5Q86YT5 568 aaPredicted RBP18.61■□□□□ 0.57
LRFN3-201ENST00000246529 ANKRD35Q8N283 1001 aa18.61■□□□□ 0.57
LRFN3-201ENST00000246529 PSPC1Q8WXF1 523 aaKnown RBP18.61■□□□□ 0.57
LRFN3-201ENST00000246529 FNBP1Q96RU3 617 aa18.61■□□□□ 0.57
LRFN3-201ENST00000246529 TARS2Q9BW92 718 aaKnown RBP18.61■□□□□ 0.57
LRFN3-201ENST00000246529 TXLNGYQ9BZA5 131 aa18.61■□□□□ 0.57
LRFN3-201ENST00000246529 GRHL1Q9NZI5 618 aa18.61■□□□□ 0.57
LRFN3-201ENST00000246529 FEZ2Q9UHY8 353 aaPredicted RBP18.61■□□□□ 0.57
LRFN3-201ENST00000246529 AGO2Q9UKV8 859 aaKnown RBP18.61■□□□□ 0.57
LRFN3-201ENST00000246529 PPFIA2O75334 1257 aa18.61■□□□□ 0.57
LRFN3-201ENST00000246529 OATP04181 439 aa18.61■□□□□ 0.57
LRFN3-201ENST00000246529 SHBGP04278 402 aa18.61■□□□□ 0.57
LRFN3-201ENST00000246529 SEC24CP53992 1094 aa18.61■□□□□ 0.57
LRFN3-201ENST00000246529 STRN3Q13033 797 aa18.61■□□□□ 0.57
LRFN3-201ENST00000246529 STXBP2Q15833 593 aa18.61■□□□□ 0.57
LRFN3-201ENST00000246529 C1orf131Q8NDD1 294 aaKnown RBP18.61■□□□□ 0.57
LRFN3-201ENST00000246529 HOXC10Q9NYD6 342 aa18.61■□□□□ 0.57
LRFN3-201ENST00000246529 ANAPC7Q9UJX3 599 aa18.61■□□□□ 0.57
LRFN3-201ENST00000246529 CLDN3O15551 220 aa18.6■□□□□ 0.57
LRFN3-201ENST00000246529 VNN1O95497 513 aa18.6■□□□□ 0.57
LRFN3-201ENST00000246529 HARSP12081 509 aaKnown RBP18.6■□□□□ 0.57
LRFN3-201ENST00000246529 RRM1P23921 792 aa18.6■□□□□ 0.57
LRFN3-201ENST00000246529 CHRNA3P32297 505 aa18.6■□□□□ 0.57
LRFN3-201ENST00000246529 PIK3CAP42336 1068 aa18.6■□□□□ 0.57
LRFN3-201ENST00000246529 PSMD6Q15008 389 aa18.6■□□□□ 0.57
LRFN3-201ENST00000246529 SIX1Q15475 284 aaPredicted RBP18.6■□□□□ 0.57
LRFN3-201ENST00000246529 PASD1Q8IV76 773 aa18.6■□□□□ 0.57
LRFN3-201ENST00000246529 EPB41L4BQ9H329 900 aa18.6■□□□□ 0.57
LRFN3-201ENST00000246529 UVRAGQ9P2Y5 699 aa18.6■□□□□ 0.57
LRFN3-201ENST00000246529 NOVA2Q9UNW9 492 aaKnown RBP18.6■□□□□ 0.57
LRFN3-201ENST00000246529 MAFBQ9Y5Q3 323 aaPredicted RBP18.6■□□□□ 0.57
LRFN3-201ENST00000246529 ARID2Q68CP9 1835 aa18.6■□□□□ 0.57
LRFN3-201ENST00000246529 WDR81Q562E7 1941 aa18.6■□□□□ 0.57
LRFN3-201ENST00000246529 NDUFAB1O14561 156 aa18.6■□□□□ 0.57
LRFN3-201ENST00000246529 C4BPAP04003 597 aaKnown RBP18.6■□□□□ 0.57
LRFN3-201ENST00000246529 UNGP13051 313 aaPredicted RBP18.6■□□□□ 0.57
LRFN3-201ENST00000246529 MDH1P40925 334 aaKnown RBP18.6■□□□□ 0.57
LRFN3-201ENST00000246529 PPP2R5EQ16537 467 aa18.6■□□□□ 0.57
LRFN3-201ENST00000246529 KRT71Q3SY84 523 aa18.6■□□□□ 0.57
LRFN3-201ENST00000246529 ZACNQ401N2 412 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms