RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 NF2P35240 595 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 LONRF1Q17RB8 773 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 CCDC38Q502W7 563 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 LARGE2Q8N3Y3 721 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 FITM2Q8N6M3 262 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 UBL4BQ8N7F7 174 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 MAB21L3Q8N8X9 362 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 CKAP2Q8WWK9 683 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 GPRC5CQ9NQ84 441 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 MROH7Q68CQ1 1323 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 RASGRF2O14827 1237 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 DLATP10515 647 aaKnown RBP12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 UNGP13051 313 aaPredicted RBP12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 GCLMP48507 274 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 GHRHRQ02643 423 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 MIEF2Q96C03 454 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 RASAL2Q9UJF2 1139 aa12.8□□□□□ -0.36
SEC61A1-201ENST00000243253 ADGRA3Q8IWK6 1321 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 BCRP11274 1271 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 NCKAP1LP55160 1127 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 PTK6Q13882 451 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 TRIP13Q15645 432 aaPredicted RBP12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 CAPN12Q6ZSI9 719 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 UTP4Q969X6 686 aaKnown RBP12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 VTI1AQ96AJ9 217 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 CHST7Q9NS84 486 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 CTTNBP2NLQ9P2B4 639 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 GTF3C4Q9UKN8 822 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 PPP1R12BO60237 982 aaPredicted RBP12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 CHRM1P11229 460 aaPredicted RBP12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 CYP11B1P15538 503 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 CCNG1P51959 295 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 RASA3Q14644 834 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 KRT27Q7Z3Y8 459 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 NUP85Q9BW27 656 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 COL20A1Q9P218 1284 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 RLFQ13129 1914 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 KIAA1217Q5T5P2 1943 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 LOC285556D6RIA3 1793 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 H0YIN7 160 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 PEX10O60683 326 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 MESDQ14696 234 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 CROCCP2Q86T23 111 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 PPM1KQ8N3J5 372 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 OGFOD1Q8N543 542 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 ZNF564Q8TBZ8 553 aaPredicted RBP12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 RMDN2Q96LZ7 410 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 MLXIPLQ9NP71 852 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 HSPBP1Q9NZL4 362 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 GJA3Q9Y6H8 435 aa12.79□□□□□ -0.36
SEC61A1-201ENST00000243253 CFAP73A6NFT4 308 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 GPC3P51654 580 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 HIBCHQ6NVY1 386 aaPredicted RBP12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 HS2ST1Q7LGA3 356 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 SAAL1Q96ER3 474 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 DDX27Q96GQ7 796 aaKnown RBP12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 FAXDC2Q96IV6 333 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 FBXL18Q96ME1 805 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 AGBL1Q96MI9 1066 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 RUNDC3BQ96NL0 473 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 SELENOSQ9BQE4 189 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 TRIM7Q9C029 511 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 UMODL1Q5DID0 1318 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 TMEM120BA0PK00 339 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 K7ENM7 598 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 CYP26A1O43174 497 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 PLA2G6O60733 806 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 TTC4O95801 387 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 NQO1P15559 274 aaKnown RBP12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 HSD17B4P51659 736 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 SLC39A4Q6P5W5 647 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 RNF207Q6ZRF8 634 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 MGARPQ8TDB4 240 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 AGAP11Q8TF27 550 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 USP15Q9Y4E8 981 aaPredicted RBP12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 LCTP09848 1927 aa12.78□□□□□ -0.36
SEC61A1-201ENST00000243253 ARHGEF35A5YM69 484 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 LYPLA2O95372 231 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 SLC8A1P32418 973 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 RARRES1P49788 294 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 ALDH5A1P51649 535 aaPredicted RBP12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 CDR2Q01850 454 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 SNX1Q13596 522 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 ACVR2BQ13705 512 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 WDR78Q5VTH9 848 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 STAMBPL1Q96FJ0 436 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 FGFR1OP2Q9NVK5 253 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 UVRAGQ9P2Y5 699 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 SERPINA10Q9UK55 444 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 PNMA3Q9UL41 463 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 TMX2Q9Y320 296 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 MYPNQ86TC9 1320 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 CLDN3O15551 220 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 KRT16P08779 473 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 PDE6CP51160 858 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 SETQ01105 290 aaPredicted RBP12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 STRIP1Q5VSL9 837 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 DAB2IPQ5VWQ8 1189 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 PADI6Q6TGC4 694 aa12.77□□□□□ -0.36
SEC61A1-201ENST00000243253 C15orf39Q6ZRI6 1047 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms