RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 A2ML1A8K2U0 1454 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 SPDYE5A6NIY4 337 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 SERPINB3P29508 390 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 CDK8P49336 464 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 VAMP7P51809 220 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 SPDYE7PQ495Y7 208 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 SLC27A3Q5K4L6 730 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 FAM102AQ5T9C2 384 aaPredicted RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 OPTNQ96CV9 577 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 TMEM245Q9H330 911 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 PARVAQ9NVD7 372 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 LZTS3O60299 673 aaPredicted RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 KLHL2O95198 593 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 SNAP25P60880 206 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 MTHFD1LQ6UB35 978 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 TRPM8Q7Z2W7 1104 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 ARL8AQ96BM9 186 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 ASIC4Q96FT7 647 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 PRMT1Q99873 361 aaKnown RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 NLRP1Q9C000 1473 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 NEMP1O14524 444 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 APOA4P06727 396 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 ASNSP08243 561 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 GNA15P30679 374 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 HSD17B4P51659 736 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 CSTF3Q12996 717 aaKnown RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 NCAPHQ15003 741 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 ZNF568Q3ZCX4 644 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 C3orf20Q8ND61 904 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 SH3TC2Q8TF17 1288 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 RMDN3Q96TC7 470 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 SYTL2Q9HCH5 934 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 KIAA0391O15091 583 aaKnown RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 NUP93Q8N1F7 819 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 ASAP3Q8TDY4 903 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 PIGOQ8TEQ8 1089 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 RBM15Q96T37 977 aaKnown RBP eCLIP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 INTS2Q9H0H0 1204 aaKnown RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 POLR3FQ9H1D9 316 aaPredicted RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 EIF3DO15371 548 aaKnown RBP eCLIP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 NCK2O43639 380 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 WBP4O75554 376 aaKnown RBP7.11□□□□□ -1.27
CSMD2-201ENST00000241312 FAM107AO95990 144 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 GPC3P51654 580 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 CCDC142Q17RM4 750 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 HORMAD1Q86X24 394 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 OSBP2Q969R2 916 aa7.11□□□□□ -1.27
CSMD2-201ENST00000241312 CACNA1CQ13936 2221 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 PHF2O75151 1096 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 PLEKHA8P1O95397 391 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 MDH1P40925 334 aaKnown RBP7.1□□□□□ -1.27
CSMD2-201ENST00000241312 KCNB1Q14721 858 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 DOK7Q18PE1 504 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 FRMD5Q7Z6J6 570 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 MOV10L1Q9BXT6 1211 aaKnown RBP7.1□□□□□ -1.27
CSMD2-201ENST00000241312 MRPS26Q9BYN8 205 aaKnown RBP7.1□□□□□ -1.27
CSMD2-201ENST00000241312 NDEL1Q9GZM8 345 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 ZNF197O14709 1029 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 CHN1P15882 459 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 VCAM1P19320 739 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 SERPINB9P50453 376 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 CDK17Q00537 523 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 ATPAF2Q8N5M1 289 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 SPATA4Q8NEY3 305 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 DTX3LQ8TDB6 740 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 AFG1LQ8WV93 481 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 ERP27Q96DN0 273 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 ZSWIM5Q9P217 1185 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 USP21Q9UK80 565 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 FTLP02792 175 aaPredicted RBP7.1□□□□□ -1.27
CSMD2-201ENST00000241312 EIF2AK2P19525 551 aaKnown RBP7.1□□□□□ -1.27
CSMD2-201ENST00000241312 GRM4Q14833 912 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 KPNB1Q14974 876 aaKnown RBP7.1□□□□□ -1.27
CSMD2-201ENST00000241312 CEP78Q5JTW2 689 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 TWF2Q6IBS0 349 aaKnown RBP7.1□□□□□ -1.27
CSMD2-201ENST00000241312 TRAF7Q6Q0C0 670 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 B4GALNT2Q8NHY0 566 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 TUBGCP3Q96CW5 907 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 ORAI2Q96SN7 254 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 UVRAGQ9P2Y5 699 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 MYO3BQ8WXR4 1341 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 DENND3A2RUS2 1198 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 MYO1GB0I1T2 1018 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 SLC26A4O43511 780 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 PSMA4P25789 261 aaKnown RBP7.1□□□□□ -1.27
CSMD2-201ENST00000241312 UBE3AQ05086 875 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 RAD51Q06609 339 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 LUZP2Q86TE4 346 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 FAM20AQ96MK3 541 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 PLEKHF1Q96S99 279 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 C2orf40Q9H1Z8 148 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 RANBP17Q9H2T7 1088 aaKnown RBP7.1□□□□□ -1.27
CSMD2-201ENST00000241312 FARP1Q9Y4F1 1045 aaPredicted RBP7.1□□□□□ -1.27
CSMD2-201ENST00000241312 MYL2P10916 166 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 EFNA5P52803 228 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 DSTYKQ6XUX3 929 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 ARHGEF1Q92888 912 aaKnown RBP7.1□□□□□ -1.27
CSMD2-201ENST00000241312 NPHS2Q9NP85 383 aa7.1□□□□□ -1.27
CSMD2-201ENST00000241312 TTC26A0AVF1 554 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms