RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 ANKFY1Q9P2R3 1169 aa15.6■□□□□ 0.09
GPN3-201ENST00000228827 MTMR6Q9Y217 621 aa15.6■□□□□ 0.09
GPN3-201ENST00000228827 SF3B1O75533 1304 aaKnown RBP eCLIP15.6■□□□□ 0.096e-10■■■■■ 187.2
GPN3-201ENST00000228827 GLUD1P00367 558 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 KRT18P05783 430 aaKnown RBP15.59■□□□□ 0.09
GPN3-201ENST00000228827 SPATA31D3P0C874 917 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 MAPTP10636 758 aaKnown RBP15.59■□□□□ 0.09
GPN3-201ENST00000228827 MCF2P10911 925 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 PROZP22891 400 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 ATAT1Q5SQI0 421 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 PRSS55Q6UWB4 352 aaPredicted RBP15.59■□□□□ 0.09
GPN3-201ENST00000228827 SPATA31D4Q6ZUB0 917 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 USP49Q70CQ1 688 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 CEP57Q86XR8 500 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 PALB2Q86YC2 1186 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 CLIC6Q96NY7 704 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 NECTIN4Q96NY8 510 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 PPP1R10Q96QC0 940 aaKnown RBP15.59■□□□□ 0.09
GPN3-201ENST00000228827 ZHX3Q9H4I2 956 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 GOLGA2P5Q9HBQ8 144 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 GTF3C3Q9Y5Q9 886 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 C2CD4DB7Z1M9 353 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 ABLIM1O14639 778 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 STX6O43752 255 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 FAM13AO94988 1023 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 IGFBP6P24592 240 aaPredicted RBP15.59■□□□□ 0.09
GPN3-201ENST00000228827 MATR3P43243 847 aaKnown RBP eCLIP15.59■□□□□ 0.09
GPN3-201ENST00000228827 CLCNKBP51801 687 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 SEZ6Q53EL9 994 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 RTP2Q5QGT7 225 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 FAM171A1Q5VUB5 890 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 MYCT1Q8N699 235 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 BICD1Q96G01 975 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 TOPORSQ9NS56 1045 aaPredicted RBP15.59■□□□□ 0.09
GPN3-201ENST00000228827 LARSQ9P2J5 1176 aaKnown RBP15.59■□□□□ 0.09
GPN3-201ENST00000228827 KCNG1Q9UIX4 513 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 FBXO2Q9UK22 296 aaPredicted RBP15.59■□□□□ 0.09
GPN3-201ENST00000228827 ODF2LQ9ULJ1 636 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 NR2E1Q9Y466 385 aa15.59■□□□□ 0.09
GPN3-201ENST00000228827 SMIM28A0A1B0GU29 152 aa15.58■□□□□ 0.08
GPN3-201ENST00000228827 PRR33A8MZF0 331 aa15.58■□□□□ 0.08
GPN3-201ENST00000228827 NCKAP1LP55160 1127 aa15.58■□□□□ 0.08
GPN3-201ENST00000228827 HAUS6Q7Z4H7 955 aa15.58■□□□□ 0.08
GPN3-201ENST00000228827 LARP4BQ92615 738 aaKnown RBP15.58■□□□□ 0.08
GPN3-201ENST00000228827 ACAP3Q96P50 834 aa15.58■□□□□ 0.08
GPN3-201ENST00000228827 USP28Q96RU2 1077 aa15.58■□□□□ 0.08
GPN3-201ENST00000228827 TTPALQ9BTX7 342 aa15.58■□□□□ 0.08
GPN3-201ENST00000228827 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.58■□□□□ 0.08
GPN3-201ENST00000228827 SRPRBQ9Y5M8 271 aaKnown RBP15.58■□□□□ 0.08
GPN3-201ENST00000228827 K7ENM7 598 aa15.57■□□□□ 0.08
GPN3-201ENST00000228827 TGM5O43548 720 aa15.57■□□□□ 0.08
GPN3-201ENST00000228827 TOM1L1O75674 476 aa15.57■□□□□ 0.08
GPN3-201ENST00000228827 RFPL2O75678 378 aa15.57■□□□□ 0.08
GPN3-201ENST00000228827 SOX4Q06945 474 aaPredicted RBP15.57■□□□□ 0.08
GPN3-201ENST00000228827 NOLC1Q14978 699 aaKnown RBP eCLIP15.57■□□□□ 0.08
GPN3-201ENST00000228827 FOXD4L5Q5VV16 416 aaPredicted RBP15.57■□□□□ 0.08
GPN3-201ENST00000228827 ALKAL1Q6UXT8 129 aa15.57■□□□□ 0.08
GPN3-201ENST00000228827 GPR149Q86SP6 731 aa15.57■□□□□ 0.08
GPN3-201ENST00000228827 FOXD4L4Q8WXT5 416 aaPredicted RBP15.57■□□□□ 0.08
GPN3-201ENST00000228827 EDAQ92838 391 aa15.57■□□□□ 0.08
GPN3-201ENST00000228827 SNX27Q96L92 541 aa15.57■□□□□ 0.08
GPN3-201ENST00000228827 ZMAT2Q96NC0 199 aaKnown RBP15.57■□□□□ 0.08
GPN3-201ENST00000228827 CCSER1Q9C0I3 900 aa15.57■□□□□ 0.08
GPN3-201ENST00000228827 PARVGQ9HBI0 331 aa15.57■□□□□ 0.08
GPN3-201ENST00000228827 FNIP2Q9P278 1114 aa15.57■□□□□ 0.08
GPN3-201ENST00000228827 CCDC195A0A1B0GUA6 201 aa15.56■□□□□ 0.08
GPN3-201ENST00000228827 H0YCG3 227 aa15.56■□□□□ 0.08
GPN3-201ENST00000228827 I3L4J1 428 aa15.56■□□□□ 0.08
GPN3-201ENST00000228827 MEFVO15553 781 aaPredicted RBP15.56■□□□□ 0.08
GPN3-201ENST00000228827 TBCAO75347 108 aaKnown RBP15.56■□□□□ 0.08
GPN3-201ENST00000228827 B3GAT3O94766 335 aa15.56■□□□□ 0.08
GPN3-201ENST00000228827 BRD1O95696 1058 aa15.56■□□□□ 0.08
GPN3-201ENST00000228827 DDIT3P35638 169 aa15.56■□□□□ 0.08
GPN3-201ENST00000228827 ZXDAP98168 799 aa15.56■□□□□ 0.08
GPN3-201ENST00000228827 CREMQ03060 361 aa15.56■□□□□ 0.08
GPN3-201ENST00000228827 PSMD5Q16401 504 aa15.56■□□□□ 0.08
GPN3-201ENST00000228827 ELMSAN1Q6PJG2 1045 aa15.56■□□□□ 0.08
GPN3-201ENST00000228827 DCLRE1AQ6PJP8 1040 aa15.56■□□□□ 0.08
GPN3-201ENST00000228827 ZPBP2Q6X784 338 aa15.56■□□□□ 0.08
GPN3-201ENST00000228827 HSCBQ8IWL3 235 aa15.56■□□□□ 0.08
GPN3-201ENST00000228827 C3orf58Q8NDZ4 430 aa15.56■□□□□ 0.08
GPN3-201ENST00000228827 SNX21Q969T3 373 aa15.56■□□□□ 0.08
GPN3-201ENST00000228827 C18orf25Q96B23 403 aaPredicted RBP15.56■□□□□ 0.08
GPN3-201ENST00000228827 UROC1Q96N76 676 aa15.56■□□□□ 0.08
GPN3-201ENST00000228827 ZSCAN16Q9H4T2 348 aaPredicted RBP15.56■□□□□ 0.08
GPN3-201ENST00000228827 DAXXQ9UER7 740 aaPredicted RBP15.56■□□□□ 0.08
GPN3-201ENST00000228827 CCDC39Q9UFE4 941 aa15.56■□□□□ 0.08
GPN3-201ENST00000228827 DPP7Q9UHL4 492 aa15.56■□□□□ 0.08
GPN3-201ENST00000228827 CLDN3O15551 220 aa15.55■□□□□ 0.08
GPN3-201ENST00000228827 TRAK2O60296 914 aa15.55■□□□□ 0.08
GPN3-201ENST00000228827 NMT1P30419 496 aaKnown RBP15.55■□□□□ 0.08
GPN3-201ENST00000228827 BRCC3P46736 316 aa15.55■□□□□ 0.08
GPN3-201ENST00000228827 ZNF131P52739 623 aa15.55■□□□□ 0.08
GPN3-201ENST00000228827 MCL1Q07820 350 aa15.55■□□□□ 0.08
GPN3-201ENST00000228827 ELAVL2Q12926 359 aaKnown RBP15.55■□□□□ 0.08
GPN3-201ENST00000228827 UPP1Q16831 310 aa15.55■□□□□ 0.08
GPN3-201ENST00000228827 XKR4Q5GH76 650 aa15.55■□□□□ 0.08
GPN3-201ENST00000228827 CD300LGQ6UXG3 332 aa15.55■□□□□ 0.08
GPN3-201ENST00000228827 HFE2Q6ZVN8 426 aa15.55■□□□□ 0.08
GPN3-201ENST00000228827 DYMQ7RTS9 669 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms