RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 DNAAF5Q86Y56 855 aa12.61□□□□□ -0.39
TNFAIP1-201ENST00000226225 TRIM59Q8IWR1 403 aa12.61□□□□□ -0.39
TNFAIP1-201ENST00000226225 PPM1KQ8N3J5 372 aa12.61□□□□□ -0.39
TNFAIP1-201ENST00000226225 C7orf31Q8N865 590 aa12.61□□□□□ -0.39
TNFAIP1-201ENST00000226225 DHX33Q9H6R0 707 aaKnown RBP12.61□□□□□ -0.39
TNFAIP1-201ENST00000226225 SUFUQ9UMX1 484 aa12.61□□□□□ -0.39
TNFAIP1-201ENST00000226225 EMSYQ7Z589 1322 aa12.61□□□□□ -0.39
TNFAIP1-201ENST00000226225 ADGRA3Q8IWK6 1321 aa12.61□□□□□ -0.39
TNFAIP1-201ENST00000226225 A0A087WZ62 844 aa12.61□□□□□ -0.39
TNFAIP1-201ENST00000226225 LACTBP83111 547 aaPredicted RBP12.61□□□□□ -0.39
TNFAIP1-201ENST00000226225 PLPPR4Q7Z2D5 763 aa12.61□□□□□ -0.39
TNFAIP1-201ENST00000226225 PPTC7Q8NI37 304 aa12.61□□□□□ -0.39
TNFAIP1-201ENST00000226225 CABS1Q96KC9 395 aa12.61□□□□□ -0.39
TNFAIP1-201ENST00000226225 FDXACB1Q9BRP7 624 aaPredicted RBP12.61□□□□□ -0.39
TNFAIP1-201ENST00000226225 C17orf75Q9HAS0 396 aa12.61□□□□□ -0.39
TNFAIP1-201ENST00000226225 AGO2Q9UKV8 859 aaKnown RBP12.61□□□□□ -0.39
TNFAIP1-201ENST00000226225 COL11A1P12107 1806 aaPredicted RBP12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 ZNF233A6NK53 670 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 FAM155AB1AL88 458 aaPredicted RBP12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 PRKCBP05771 671 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 FGFR4P22455 802 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 CDR1P51861 262 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 CAPSQ13938 189 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 MXD4Q14582 209 aaPredicted RBP12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 COBLL1Q53SF7 1204 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 CEP85LQ5SZL2 805 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 GJB7Q6PEY0 223 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 CXCL17Q6UXB2 119 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 CCDC114Q96M63 670 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 APOL6Q9BWW8 343 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 EPHB6O15197 1021 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 RARBP10826 455 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 NAMPTP43490 491 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 SLC26A2P50443 739 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 MXI1P50539 228 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 APLP1P51693 650 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 GTF2BQ00403 316 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 BFSP1Q12934 665 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 GRIK4Q16099 956 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 PAPD7Q5XG87 772 aaKnown RBP12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 INTS8Q75QN2 995 aaKnown RBP12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 FIZ1Q96SL8 496 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 ITIH6Q6UXX5 1313 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 PAPPA2Q9BXP8 1791 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 WDR90Q96KV7 1748 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 GOLGA6L7A0A1B0GV03 622 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 LRRC53A6NM62 1247 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 ZNF263O14978 683 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 MAFO75444 373 aaPredicted RBP12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 MMP3P08254 477 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 DLG4P78352 724 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 TRIM32Q13049 653 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 SUGP1Q8IWZ8 645 aaKnown RBP12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 EHBP1Q8NDI1 1231 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 OSBPL9Q96SU4 736 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 KRT12Q99456 494 aa12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 TRIM6Q9C030 488 aaPredicted RBP12.6□□□□□ -0.39
TNFAIP1-201ENST00000226225 A0A1W2PQC6 194 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 KRT19P08727 400 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 AKR1A1P14550 325 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 EIF4A3P38919 411 aaKnown RBP12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 ZBED6P86452 979 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 GFPT1Q06210 699 aaPredicted RBP12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 PRPF4BQ13523 1007 aaKnown RBP12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 FSCN1Q16658 493 aaKnown RBP12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 ZNF568Q3ZCX4 644 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 CREG2Q8IUH2 290 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 EXOC8Q8IYI6 725 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 AENQ8WTP8 325 aaKnown RBP12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 N4BP2L2Q92802 583 aaPredicted RBP12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 NIFKQ9BYG3 293 aaKnown RBP12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 GOLPH3Q9H4A6 298 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 TOPORSQ9NS56 1045 aaPredicted RBP12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 GOLGA8KD6RF30 607 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 HEXIM1O94992 359 aaKnown RBP12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 GLI1P08151 1106 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 CYP2C9P11712 490 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 HOXD10P28358 340 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 CPT1AP50416 773 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 VAV2P52735 878 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 KLHL30Q0D2K2 578 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 NFX1Q12986 1120 aaKnown RBP12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 SFMBT2Q5VUG0 894 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 ZNF467Q7Z7K2 595 aaPredicted RBP12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 SPIRE2Q8WWL2 714 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 SLC35C1Q96A29 364 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 TBC1D31Q96DN5 1066 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 SLC24A3Q9HC58 644 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 STIM2Q9P246 746 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 SNX12Q9UMY4 172 aa12.59□□□□□ -0.39
TNFAIP1-201ENST00000226225 STBD1O95210 358 aa12.58□□□□□ -0.39
TNFAIP1-201ENST00000226225 CTSHP09668 335 aa12.58□□□□□ -0.39
TNFAIP1-201ENST00000226225 CCDC172P0C7W6 258 aa12.58□□□□□ -0.39
TNFAIP1-201ENST00000226225 MAPTP10636 758 aaKnown RBP12.58□□□□□ -0.39
TNFAIP1-201ENST00000226225 PRKAR2AP13861 404 aaKnown RBP12.58□□□□□ -0.39
TNFAIP1-201ENST00000226225 LSP1P33241 339 aa12.58□□□□□ -0.39
TNFAIP1-201ENST00000226225 TFAMQ00059 246 aaKnown RBP12.58□□□□□ -0.39
TNFAIP1-201ENST00000226225 BMT2Q1RMZ1 405 aa12.58□□□□□ -0.39
TNFAIP1-201ENST00000226225 MAMDC4Q6UXC1 1216 aa12.58□□□□□ -0.39
TNFAIP1-201ENST00000226225 GPD1LQ8N335 351 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms