RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 DLK2Q6UY11 383 aa23.83■■□□□ 1.41
CCDC9-201ENST00000221922 FBXL13Q8NEE6 735 aa23.83■■□□□ 1.41
CCDC9-201ENST00000221922 KAT2BQ92831 832 aa23.83■■□□□ 1.41
CCDC9-201ENST00000221922 KREMEN1Q96MU8 473 aa23.83■■□□□ 1.41
CCDC9-201ENST00000221922 TRIM51Q9BSJ1 452 aa23.83■■□□□ 1.41
CCDC9-201ENST00000221922 DPH5Q9H2P9 285 aa23.83■■□□□ 1.41
CCDC9-201ENST00000221922 SPON1Q9HCB6 807 aa23.83■■□□□ 1.41
CCDC9-201ENST00000221922 NOCTQ9UK39 431 aaKnown RBP23.83■■□□□ 1.41
CCDC9-201ENST00000221922 A0A0G2JLL6 359 aaPredicted RBP23.82■■□□□ 1.4
CCDC9-201ENST00000221922 GOLGA6L10A0A0M3HER8 536 aa23.82■■□□□ 1.4
CCDC9-201ENST00000221922 FAM187AA6NFU0 413 aa23.82■■□□□ 1.4
CCDC9-201ENST00000221922 DR1Q01658 176 aa23.82■■□□□ 1.4
CCDC9-201ENST00000221922 SP4Q02446 784 aa23.82■■□□□ 1.4
CCDC9-201ENST00000221922 CYP24A1Q07973 514 aa23.82■■□□□ 1.4
CCDC9-201ENST00000221922 PRRT2Q7Z6L0 340 aaPredicted RBP23.82■■□□□ 1.4
CCDC9-201ENST00000221922 GPD1LQ8N335 351 aa23.82■■□□□ 1.4
CCDC9-201ENST00000221922 OTUD6BQ8N6M0 293 aa23.82■■□□□ 1.4
CCDC9-201ENST00000221922 KAT5Q92993 513 aa23.82■■□□□ 1.4
CCDC9-201ENST00000221922 ERP44Q9BS26 406 aa23.82■■□□□ 1.4
CCDC9-201ENST00000221922 E7EVH7 732 aa23.82■■□□□ 1.4
CCDC9-201ENST00000221922 HNRNPDLO14979 420 aaKnown RBP23.82■■□□□ 1.4
CCDC9-201ENST00000221922 SGPL1O95470 568 aa23.82■■□□□ 1.4
CCDC9-201ENST00000221922 PPP2R2AP63151 447 aa23.82■■□□□ 1.4
CCDC9-201ENST00000221922 SLC39A4Q6P5W5 647 aa23.82■■□□□ 1.4
CCDC9-201ENST00000221922 MORC4Q8TE76 937 aa23.82■■□□□ 1.4
CCDC9-201ENST00000221922 SEMA4DQ92854 862 aa23.82■■□□□ 1.4
CCDC9-201ENST00000221922 FMO2Q99518 471 aa23.82■■□□□ 1.4
CCDC9-201ENST00000221922 ZDHHC18Q9NUE0 388 aa23.82■■□□□ 1.4
CCDC9-201ENST00000221922 RNF181Q9P0P0 153 aa23.82■■□□□ 1.4
CCDC9-201ENST00000221922 MAFBQ9Y5Q3 323 aaPredicted RBP23.82■■□□□ 1.4
CCDC9-201ENST00000221922 SYNGAP1Q96PV0 1343 aa23.81■■□□□ 1.4
CCDC9-201ENST00000221922 MTA2O94776 668 aa23.81■■□□□ 1.4
CCDC9-201ENST00000221922 FSBPO95073 299 aa23.81■■□□□ 1.4
CCDC9-201ENST00000221922 PAEPP09466 180 aa23.81■■□□□ 1.4
CCDC9-201ENST00000221922 SCP2P22307 547 aa23.81■■□□□ 1.4
CCDC9-201ENST00000221922 EDNRBP24530 442 aa23.81■■□□□ 1.4
CCDC9-201ENST00000221922 DRG2P55039 364 aaKnown RBP23.81■■□□□ 1.4
CCDC9-201ENST00000221922 EIF3BP55884 814 aaKnown RBP23.81■■□□□ 1.4
CCDC9-201ENST00000221922 DHX34Q14147 1143 aaKnown RBP23.81■■□□□ 1.4
CCDC9-201ENST00000221922 ALG3Q92685 438 aa23.81■■□□□ 1.4
CCDC9-201ENST00000221922 FAM81BQ96LP2 452 aa23.81■■□□□ 1.4
CCDC9-201ENST00000221922 SPATC1LQ9H0A9 340 aa23.81■■□□□ 1.4
CCDC9-201ENST00000221922 RAB20Q9NX57 234 aa23.81■■□□□ 1.4
CCDC9-201ENST00000221922 ADGRA3Q8IWK6 1321 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 GMNCA6NCL1 334 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 TRAPPC3O43617 180 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 CHRNB2P17787 502 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 FNTAP49354 379 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 SOX10P56693 466 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 C6orf89Q6UWU4 347 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 MMS22LQ6ZRQ5 1243 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 CYFIP1Q7L576 1253 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 ENOSF1Q7L5Y1 443 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 NOP9Q86U38 636 aaKnown RBP23.8■■□□□ 1.4
CCDC9-201ENST00000221922 UBL4BQ8N7F7 174 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 KCNN1Q92952 543 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 RPS6KC1Q96S38 1066 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 ERVK-5Q9HDB9 667 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.8■■□□□ 1.4
CCDC9-201ENST00000221922 ARHGAP28Q9P2N2 729 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 ALG6Q9Y672 507 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 LRRC37A2A6NM11 1700 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 CYP26A1O43174 497 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 PRPF4BQ13523 1007 aaKnown RBP23.8■■□□□ 1.4
CCDC9-201ENST00000221922 GADL1Q6ZQY3 521 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 SUGP1Q8IWZ8 645 aaKnown RBP23.8■■□□□ 1.4
CCDC9-201ENST00000221922 HELQQ8TDG4 1101 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 BICD1Q96G01 975 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 FHDC1Q9C0D6 1143 aaPredicted RBP23.8■■□□□ 1.4
CCDC9-201ENST00000221922 POLR3FQ9H1D9 316 aaPredicted RBP23.8■■□□□ 1.4
CCDC9-201ENST00000221922 KIAA1586Q9HCI6 787 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 ZNF302Q9NR11 478 aa23.8■■□□□ 1.4
CCDC9-201ENST00000221922 NOVA2Q9UNW9 492 aaKnown RBP23.8■■□□□ 1.4
CCDC9-201ENST00000221922 IRF6O14896 467 aa23.79■■□□□ 1.4
CCDC9-201ENST00000221922 ZC3H11AO75152 810 aaKnown RBP eCLIP23.79■■□□□ 1.43e-31■■■□□ 15.3
CCDC9-201ENST00000221922 PDE6CP51160 858 aa23.79■■□□□ 1.4
CCDC9-201ENST00000221922 FSTL1Q12841 308 aa23.79■■□□□ 1.4
CCDC9-201ENST00000221922 ICE2Q659A1 982 aa23.79■■□□□ 1.4
CCDC9-201ENST00000221922 ERO1BQ86YB8 467 aa23.79■■□□□ 1.4
CCDC9-201ENST00000221922 CYFIP2Q96F07 1278 aa23.79■■□□□ 1.4
CCDC9-201ENST00000221922 PPANQ9NQ55 473 aaKnown RBP23.79■■□□□ 1.4
CCDC9-201ENST00000221922 CNOT8Q9UFF9 292 aaKnown RBP23.79■■□□□ 1.4
CCDC9-201ENST00000221922 IGKV6D-21A0A0A0MT36 114 aa23.79■■□□□ 1.4
CCDC9-201ENST00000221922 CXCL11O14625 94 aa23.79■■□□□ 1.4
CCDC9-201ENST00000221922 HSPA6P17066 643 aa23.79■■□□□ 1.4
CCDC9-201ENST00000221922 IRX3P78415 501 aaPredicted RBP23.79■■□□□ 1.4
CCDC9-201ENST00000221922 KCTD19Q17RG1 926 aaPredicted RBP23.79■■□□□ 1.4
CCDC9-201ENST00000221922 CNPY4Q8N129 248 aa23.79■■□□□ 1.4
CCDC9-201ENST00000221922 TAS1R2Q8TE23 839 aa23.79■■□□□ 1.4
CCDC9-201ENST00000221922 TLCD1Q96CP7 247 aa23.79■■□□□ 1.4
CCDC9-201ENST00000221922 PCDHB18PQ96TA0 734 aa23.79■■□□□ 1.4
CCDC9-201ENST00000221922 ELP3Q9H9T3 547 aa23.79■■□□□ 1.4
CCDC9-201ENST00000221922 BCCIPQ9P287 314 aaKnown RBP eCLIP23.79■■□□□ 1.4
CCDC9-201ENST00000221922 ZNFX1Q9P2E3 1918 aaKnown RBP23.78■■□□□ 1.4
CCDC9-201ENST00000221922 KIAA0391O15091 583 aaKnown RBP23.78■■□□□ 1.4
CCDC9-201ENST00000221922 OATP04181 439 aa23.78■■□□□ 1.4
CCDC9-201ENST00000221922 CYP11B1P15538 503 aa23.78■■□□□ 1.4
CCDC9-201ENST00000221922 ATP4AP20648 1035 aa23.78■■□□□ 1.4
CCDC9-201ENST00000221922 CDR2Q01850 454 aa23.78■■□□□ 1.4
CCDC9-201ENST00000221922 ZNF211Q13398 564 aaPredicted RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms