RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 IRF2BP1Q8IU81 584 aa29.6■■■□□ 2.33
CHMP4B-201ENST00000217402 CRIPAKQ8N1N5 446 aa29.6■■■□□ 2.33
CHMP4B-201ENST00000217402 CCDC127Q96BQ5 260 aa29.6■■■□□ 2.33
CHMP4B-201ENST00000217402 GAD1Q99259 594 aa29.6■■■□□ 2.33
CHMP4B-201ENST00000217402 UBE2OQ9C0C9 1292 aaKnown RBP29.6■■■□□ 2.33
CHMP4B-201ENST00000217402 PDE11AQ9HCR9 933 aa29.6■■■□□ 2.33
CHMP4B-201ENST00000217402 INPP5FQ9Y2H2 1132 aa29.6■■■□□ 2.33
CHMP4B-201ENST00000217402 GIT1Q9Y2X7 761 aa29.6■■■□□ 2.33
CHMP4B-201ENST00000217402 TTC3P53804 2025 aa29.6■■■□□ 2.33
CHMP4B-201ENST00000217402 LACTBL1A8MY62 500 aa29.6■■■□□ 2.33
CHMP4B-201ENST00000217402 SPAG1Q07617 926 aa29.6■■■□□ 2.33
CHMP4B-201ENST00000217402 HELQQ8TDG4 1101 aa29.6■■■□□ 2.33
CHMP4B-201ENST00000217402 MFSD14AQ96MC6 490 aa29.6■■■□□ 2.33
CHMP4B-201ENST00000217402 GDF15Q99988 308 aa29.6■■■□□ 2.33
CHMP4B-201ENST00000217402 MTIF3Q9H2K0 278 aaKnown RBP29.6■■■□□ 2.33
CHMP4B-201ENST00000217402 TTC26A0AVF1 554 aa29.59■■■□□ 2.33
CHMP4B-201ENST00000217402 MAPK13O15264 365 aa29.59■■■□□ 2.33
CHMP4B-201ENST00000217402 GATMP50440 423 aa29.59■■■□□ 2.33
CHMP4B-201ENST00000217402 GLRA4Q5JXX5 417 aa29.59■■■□□ 2.33
CHMP4B-201ENST00000217402 CLLU1OSQ5K130 101 aa29.59■■■□□ 2.33
CHMP4B-201ENST00000217402 GLB1LQ6UWU2 654 aa29.59■■■□□ 2.33
CHMP4B-201ENST00000217402 TOP1MTQ969P6 601 aa29.59■■■□□ 2.33
CHMP4B-201ENST00000217402 UBN1Q9NPG3 1134 aa29.59■■■□□ 2.33
CHMP4B-201ENST00000217402 RNF216Q9NWF9 866 aaPredicted RBP29.59■■■□□ 2.33
CHMP4B-201ENST00000217402 ARMCX3Q9UH62 379 aaPredicted RBP29.59■■■□□ 2.33
CHMP4B-201ENST00000217402 SLC4A7Q9Y6M7 1214 aa29.59■■■□□ 2.33
CHMP4B-201ENST00000217402 ARL5CA6NH57 179 aa29.58■■■□□ 2.33
CHMP4B-201ENST00000217402 GNA14O95837 355 aa29.58■■■□□ 2.33
CHMP4B-201ENST00000217402 DLATP10515 647 aaKnown RBP29.58■■■□□ 2.33
CHMP4B-201ENST00000217402 KRT13P13646 458 aa29.58■■■□□ 2.33
CHMP4B-201ENST00000217402 AFF1P51825 1210 aaKnown RBP29.58■■■□□ 2.33
CHMP4B-201ENST00000217402 SHHQ15465 462 aa29.58■■■□□ 2.33
CHMP4B-201ENST00000217402 INTS8Q75QN2 995 aaKnown RBP29.58■■■□□ 2.33
CHMP4B-201ENST00000217402 FAM114A1Q8IWE2 563 aa29.58■■■□□ 2.33
CHMP4B-201ENST00000217402 PLEKHO2Q8TD55 490 aa29.58■■■□□ 2.33
CHMP4B-201ENST00000217402 RPS6KC1Q96S38 1066 aa29.58■■■□□ 2.33
CHMP4B-201ENST00000217402 HSD3B7Q9H2F3 369 aa29.58■■■□□ 2.33
CHMP4B-201ENST00000217402 MAGEC2Q9UBF1 373 aaPredicted RBP29.58■■■□□ 2.33
CHMP4B-201ENST00000217402 GOLGA6L19H0YKK7 550 aa29.57■■■□□ 2.32
CHMP4B-201ENST00000217402 IL18RAPO95256 599 aa29.57■■■□□ 2.32
CHMP4B-201ENST00000217402 PSMD6Q15008 389 aa29.57■■■□□ 2.32
CHMP4B-201ENST00000217402 CDKAL1Q5VV42 579 aa29.57■■■□□ 2.32
CHMP4B-201ENST00000217402 ABI1Q8IZP0 508 aa29.57■■■□□ 2.32
CHMP4B-201ENST00000217402 BORCS6Q96GS4 357 aa29.57■■■□□ 2.32
CHMP4B-201ENST00000217402 RNPC3Q96LT9 517 aaKnown RBP29.57■■■□□ 2.32
CHMP4B-201ENST00000217402 KCNJ18B7U540 433 aa29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 OFD1O75665 1012 aa29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 DLG4P78352 724 aa29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 POU5F1Q01860 360 aaKnown RBP29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 BFSP1Q12934 665 aa29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 KCNJ12Q14500 433 aa29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 DCAF17Q5H9S7 520 aaPredicted RBP29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 LMBRD2Q68DH5 695 aaPredicted RBP29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 ALKAL1Q6UXT8 129 aa29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 FRMD5Q7Z6J6 570 aa29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 FAM84AQ96KN4 292 aa29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 FNBP1Q96RU3 617 aa29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 POP1Q99575 1024 aaKnown RBP29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 PLEKHA5Q9HAU0 1116 aa29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 CNTN3Q9P232 1028 aa29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 TRIM49P0CI25 452 aa29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 TRIM49CP0CI26 452 aa29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 SCNN1GP51170 649 aa29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 VAMP7P51809 220 aa29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 JADE1Q6IE81 842 aa29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 METTL14Q9HCE5 456 aaKnown RBP29.56■■■□□ 2.32
CHMP4B-201ENST00000217402 CITO14578 2027 aa29.55■■■□□ 2.32
CHMP4B-201ENST00000217402 PTGESO14684 152 aa29.55■■■□□ 2.32
CHMP4B-201ENST00000217402 HOXA2O43364 376 aa29.55■■■□□ 2.32
CHMP4B-201ENST00000217402 NFICP08651 508 aa29.55■■■□□ 2.32
CHMP4B-201ENST00000217402 RASIP1Q5U651 963 aa29.55■■■□□ 2.32
CHMP4B-201ENST00000217402 TCERG1LQ5VWI1 586 aa29.55■■■□□ 2.32
CHMP4B-201ENST00000217402 GSTCDQ8NEC7 633 aa29.55■■■□□ 2.32
CHMP4B-201ENST00000217402 PARD3BQ8TEW8 1205 aa29.55■■■□□ 2.32
CHMP4B-201ENST00000217402 KIF12Q96FN5 646 aa29.55■■■□□ 2.32
CHMP4B-201ENST00000217402 ZMAT2Q96NC0 199 aaKnown RBP29.55■■■□□ 2.32
CHMP4B-201ENST00000217402 RBSNQ9H1K0 784 aa29.55■■■□□ 2.32
CHMP4B-201ENST00000217402 ASB7Q9H672 318 aa29.55■■■□□ 2.32
CHMP4B-201ENST00000217402 PLAGL2Q9UPG8 496 aa29.55■■■□□ 2.32
CHMP4B-201ENST00000217402 PDE4DIPQ5VU43 2346 aa29.55■■■□□ 2.32
CHMP4B-201ENST00000217402 PTPRJQ12913 1337 aa29.54■■■□□ 2.32
CHMP4B-201ENST00000217402 RALGAPA2Q2PPJ7 1873 aa29.54■■■□□ 2.32
CHMP4B-201ENST00000217402 LRRIQ3A6PVS8 624 aaPredicted RBP29.54■■■□□ 2.32
CHMP4B-201ENST00000217402 POMCP01189 267 aa29.54■■■□□ 2.32
CHMP4B-201ENST00000217402 ATP2A2P16615 1042 aaKnown RBP29.54■■■□□ 2.32
CHMP4B-201ENST00000217402 ZNF18P17022 549 aa29.54■■■□□ 2.32
CHMP4B-201ENST00000217402 MTIF2P46199 727 aaKnown RBP29.54■■■□□ 2.32
CHMP4B-201ENST00000217402 MARSP56192 900 aaKnown RBP29.54■■■□□ 2.32
CHMP4B-201ENST00000217402 TPM4P67936 248 aa29.54■■■□□ 2.32
CHMP4B-201ENST00000217402 XKR4Q5GH76 650 aa29.54■■■□□ 2.32
CHMP4B-201ENST00000217402 TCP11X2Q5H9J9 407 aa29.54■■■□□ 2.32
CHMP4B-201ENST00000217402 CD302Q8IX05 232 aa29.54■■■□□ 2.32
CHMP4B-201ENST00000217402 EFCAB13Q8IY85 973 aa29.54■■■□□ 2.32
CHMP4B-201ENST00000217402 SLC9A7Q96T83 725 aa29.54■■■□□ 2.32
CHMP4B-201ENST00000217402 MIOSQ9NXC5 875 aa29.54■■■□□ 2.32
CHMP4B-201ENST00000217402 PTPRSQ13332 1948 aa29.54■■■□□ 2.32
CHMP4B-201ENST00000217402 SMIM28A0A1B0GU29 152 aa29.53■■■□□ 2.32
CHMP4B-201ENST00000217402 TBKBP1A7MCY6 615 aa29.53■■■□□ 2.32
CHMP4B-201ENST00000217402 DGKIO75912 1065 aa29.53■■■□□ 2.32
CHMP4B-201ENST00000217402 ATP1A3P13637 1013 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms