RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 ZNF446Q9NWS9 450 aa11.46□□□□□ -0.57
APOBEC3D-201ENST00000216099 PFDN2Q9UHV9 154 aa11.46□□□□□ -0.57
APOBEC3D-201ENST00000216099 DUSP10Q9Y6W6 482 aa11.46□□□□□ -0.57
APOBEC3D-201ENST00000216099 MACROD2A1Z1Q3 448 aa11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 PMM2O15305 246 aa11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 N4BP1O75113 896 aaKnown RBP11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 ZRANB2O95218 330 aaKnown RBP eCLIP11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 FERP16591 822 aa11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 ABCD1P33897 745 aa11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 CYP2J2P51589 502 aa11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 APBA1Q02410 837 aa11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 TMCO3Q6UWJ1 677 aa11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 LBX2Q6XYB7 198 aa11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 INTS8Q75QN2 995 aaKnown RBP11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 ZNF572Q7Z3I7 529 aaPredicted RBP11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 HAUS6Q7Z4H7 955 aa11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 FAM133AQ8N9E0 248 aa11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 DCPSQ96C86 337 aaKnown RBP11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 IKZF4Q9H2S9 585 aa11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 FEZ2Q9UHY8 353 aaPredicted RBP11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 TSKSQ9UJT2 592 aa11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 RAB21Q9UL25 225 aa11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 NENFQ9UMX5 172 aa11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 EXOC7Q9UPT5 735 aa11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 CSADQ9Y600 493 aa11.46□□□□□ -0.58
APOBEC3D-201ENST00000216099 IGSF9BQ9UPX0 1349 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 EXOC3O60645 756 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 VDRP11473 427 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 KRT13P13646 458 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 CYP2C19P33261 490 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 ENPEPQ07075 957 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 NAB2Q15742 525 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 RIOX2Q8IUF8 465 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 FAM169BQ8N8A8 192 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 KCNN1Q92952 543 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 ITFG2Q969R8 447 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 NOX5Q96PH1 765 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 PARD6BQ9BYG5 372 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 JPH1Q9HDC5 661 aaPredicted RBP11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 SLC9A2Q9UBY0 812 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 SNX12Q9UMY4 172 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 USP20Q9Y2K6 914 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 IPPQ9Y573 584 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 PCDHGB3Q9Y5G1 929 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 CAPN6Q9Y6Q1 641 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 CCDC151A5D8V7 595 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 A6NJY4 79 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 ASMTLO95671 621 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 MYL7Q01449 175 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 ITIH3Q06033 890 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 CBX2Q14781 532 aaPredicted RBP11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 IQCEQ6IPM2 695 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 C16orf54Q6UWD8 224 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 ABHD15Q6UXT9 468 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 ANO5Q75V66 913 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 THNSL2Q86YJ6 484 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 SULF1Q8IWU6 871 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 NTPCRQ9BSD7 190 aaKnown RBP11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 STK33Q9BYT3 514 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 ANKZF1Q9H8Y5 726 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 MLXIPQ9HAP2 919 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 PDLIM7Q9NR12 457 aa11.45□□□□□ -0.58
APOBEC3D-201ENST00000216099 A0A087X0T9 212 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 ENC1O14682 589 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 DDNO94850 711 aaPredicted RBP11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 MOCS3O95396 460 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 FAM228BP0C875 321 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 TCP1P17987 556 aaKnown RBP11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 STAT1P42224 750 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 IREB2P48200 963 aaKnown RBP11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 SMTNP53814 917 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 EPHB1P54762 984 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 HNRNPH2P55795 449 aaKnown RBP11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 PPATQ06203 517 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 SETDB1Q15047 1291 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 STXBP2Q15833 593 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 PLA2G4FQ68DD2 849 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 MIS18BP1Q6P0N0 1132 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 SIX5Q8N196 739 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 XXYLT1Q8NBI6 393 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 MCPH1Q8NEM0 835 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 OCSTAMPQ9BR26 566 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 INTS2Q9H0H0 1204 aaKnown RBP11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 EFCC1Q9HA90 598 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 SAGE1Q9NXZ1 904 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 HDAC6Q9UBN7 1215 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 A0A0G2JLL6 359 aaPredicted RBP11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 CXCL11O14625 94 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 ZNF862O60290 1169 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 SUPT20HL2P0C7V6 817 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 COL6A1P12109 1028 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 PEX3P56589 373 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 ACTR2P61160 394 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 PTK2Q05397 1052 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 ZNF571Q7Z3V5 609 aaPredicted RBP11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 PRRT2Q7Z6L0 340 aaPredicted RBP11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 VPS36Q86VN1 386 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 MAP4K3Q8IVH8 894 aa11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 AJAP1Q9UKB5 411 aaPredicted RBP11.44□□□□□ -0.58
APOBEC3D-201ENST00000216099 HYOU1Q9Y4L1 999 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms