RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 OASLQ15646 514 aaKnown RBP11.01□□□□□ -0.65
VCL-201ENST00000211998 IRGCQ6NXR0 463 aa11.01□□□□□ -0.65
VCL-201ENST00000211998 DGKHQ86XP1 1220 aa11.01□□□□□ -0.65
VCL-201ENST00000211998 TTC13Q8NBP0 860 aa11.01□□□□□ -0.65
VCL-201ENST00000211998 COPG1Q9Y678 874 aaKnown RBP11.01□□□□□ -0.65
VCL-201ENST00000211998 ABCA8O94911 1581 aa11.01□□□□□ -0.65
VCL-201ENST00000211998 ZNF839A8K0R7 811 aa11.01□□□□□ -0.65
VCL-201ENST00000211998 GSTT1P30711 240 aa11.01□□□□□ -0.65
VCL-201ENST00000211998 NUP107P57740 925 aa11.01□□□□□ -0.65
VCL-201ENST00000211998 RASGRF1Q13972 1273 aa11.01□□□□□ -0.65
VCL-201ENST00000211998 DCAF4Q8WV16 495 aa11.01□□□□□ -0.65
VCL-201ENST00000211998 C20orf96Q9NUD7 363 aaPredicted RBP11.01□□□□□ -0.65
VCL-201ENST00000211998 DAPK2Q9UIK4 370 aa11.01□□□□□ -0.65
VCL-201ENST00000211998 CDC42BPGQ6DT37 1551 aa11.01□□□□□ -0.65
VCL-201ENST00000211998 GOLGA8IPA6NC78 632 aa11.01□□□□□ -0.65
VCL-201ENST00000211998 ITIH2P19823 946 aa11.01□□□□□ -0.65
VCL-201ENST00000211998 SLC16A2P36021 539 aa11.01□□□□□ -0.65
VCL-201ENST00000211998 CLK1P49759 484 aaKnown RBP11.01□□□□□ -0.65
VCL-201ENST00000211998 ST13P50502 369 aaKnown RBP11.01□□□□□ -0.65
VCL-201ENST00000211998 UBXN2AP68543 259 aa11.01□□□□□ -0.65
VCL-201ENST00000211998 CAPRIN1Q14444 709 aaKnown RBP11.01□□□□□ -0.65
VCL-201ENST00000211998 JAMLQ86YT9 394 aa11.01□□□□□ -0.65
VCL-201ENST00000211998 GLYCTKQ8IVS8 523 aa11.01□□□□□ -0.65
VCL-201ENST00000211998 RBM15Q96T37 977 aaKnown RBP eCLIP11.01□□□□□ -0.652e-6■■■□□ 17.5
VCL-201ENST00000211998 KLHL4Q9C0H6 718 aa11.01□□□□□ -0.65
VCL-201ENST00000211998 SLC38A10Q9HBR0 1119 aa11.01□□□□□ -0.65
VCL-201ENST00000211998 DIABLOQ9NR28 239 aa11.01□□□□□ -0.65
VCL-201ENST00000211998 XPAP23025 273 aaPredicted RBP11□□□□□ -0.65
VCL-201ENST00000211998 PSMA2P25787 234 aa11□□□□□ -0.65
VCL-201ENST00000211998 SNX30Q5VWJ9 437 aa11□□□□□ -0.65
VCL-201ENST00000211998 CIAPIN1Q6FI81 312 aa11□□□□□ -0.65
VCL-201ENST00000211998 TMEM179Q6ZVK1 233 aa11□□□□□ -0.65
VCL-201ENST00000211998 OXER1Q8TDS5 423 aa11□□□□□ -0.65
VCL-201ENST00000211998 SKA2Q8WVK7 121 aaPredicted RBP11□□□□□ -0.65
VCL-201ENST00000211998 EDEM3Q9BZQ6 932 aa11□□□□□ -0.65
VCL-201ENST00000211998 MANSC1Q9H8J5 431 aa11□□□□□ -0.65
VCL-201ENST00000211998 PSMC3IPQ9P2W1 217 aaPredicted RBP11□□□□□ -0.65
VCL-201ENST00000211998 HECW2Q9P2P5 1572 aa11□□□□□ -0.65
VCL-201ENST00000211998 A0A1B0GW55 424 aa11□□□□□ -0.65
VCL-201ENST00000211998 NBNO60934 754 aa11□□□□□ -0.65
VCL-201ENST00000211998 DUX4L2P0CJ85 424 aa11□□□□□ -0.65
VCL-201ENST00000211998 DUX4L3P0CJ86 424 aa11□□□□□ -0.65
VCL-201ENST00000211998 DUX4L4P0CJ87 422 aa11□□□□□ -0.65
VCL-201ENST00000211998 DUX4L5P0CJ88 424 aa11□□□□□ -0.65
VCL-201ENST00000211998 DUX4L6P0CJ89 424 aa11□□□□□ -0.65
VCL-201ENST00000211998 DUX4L7P0CJ90 424 aa11□□□□□ -0.65
VCL-201ENST00000211998 PSMC3P17980 439 aa11□□□□□ -0.65
VCL-201ENST00000211998 ARSEP51690 589 aa11□□□□□ -0.65
VCL-201ENST00000211998 MECOMQ03112 1051 aa11□□□□□ -0.65
VCL-201ENST00000211998 SLFN12LQ6IEE8 588 aa11□□□□□ -0.65
VCL-201ENST00000211998 NLRP9Q7RTR0 991 aa11□□□□□ -0.65
VCL-201ENST00000211998 CLEC4FQ8N1N0 589 aa11□□□□□ -0.65
VCL-201ENST00000211998 HEY2Q9UBP5 337 aa11□□□□□ -0.65
VCL-201ENST00000211998 DUX4Q9UBX2 424 aa11□□□□□ -0.65
VCL-201ENST00000211998 TUBE1Q9UJT0 475 aa11□□□□□ -0.65
VCL-201ENST00000211998 PNMA3Q9UL41 463 aa11□□□□□ -0.65
VCL-201ENST00000211998 PALLDQ8WX93 1383 aa11□□□□□ -0.65
VCL-201ENST00000211998 LOC100653049A0A140TA62 436 aa11□□□□□ -0.65
VCL-201ENST00000211998 PRKAB2O43741 272 aa11□□□□□ -0.65
VCL-201ENST00000211998 TBC1D4O60343 1298 aa11□□□□□ -0.65
VCL-201ENST00000211998 KRT34O76011 436 aa11□□□□□ -0.65
VCL-201ENST00000211998 SRGNP10124 158 aa11□□□□□ -0.65
VCL-201ENST00000211998 OTUD4Q01804 1114 aaKnown RBP11□□□□□ -0.65
VCL-201ENST00000211998 TRIM25Q14258 630 aaKnown RBP11□□□□□ -0.65
VCL-201ENST00000211998 SLC18A3Q16572 532 aa11□□□□□ -0.65
VCL-201ENST00000211998 HIF1AQ16665 826 aa11□□□□□ -0.65
VCL-201ENST00000211998 DALRD3Q5D0E6 543 aaKnown RBP11□□□□□ -0.65
VCL-201ENST00000211998 ZNF746Q6NUN9 644 aaPredicted RBP11□□□□□ -0.65
VCL-201ENST00000211998 ATL2Q8NHH9 583 aa11□□□□□ -0.65
VCL-201ENST00000211998 FAM149B1Q96BN6 582 aa11□□□□□ -0.65
VCL-201ENST00000211998 MASTLQ96GX5 879 aa11□□□□□ -0.65
VCL-201ENST00000211998 RXFP1Q9HBX9 757 aa11□□□□□ -0.65
VCL-201ENST00000211998 ADAM22Q9P0K1 906 aa11□□□□□ -0.65
VCL-201ENST00000211998 ZMYND8Q9ULU4 1186 aaPredicted RBP11□□□□□ -0.65
VCL-201ENST00000211998 MYO3BQ8WXR4 1341 aa11□□□□□ -0.65
VCL-201ENST00000211998 MAGI3Q5TCQ9 1506 aa11□□□□□ -0.65
VCL-201ENST00000211998 POTEB3A0JP26 581 aa11□□□□□ -0.65
VCL-201ENST00000211998 NEMP1O14524 444 aa11□□□□□ -0.65
VCL-201ENST00000211998 FOXP2O15409 715 aa11□□□□□ -0.65
VCL-201ENST00000211998 HMOX2P30519 316 aa11□□□□□ -0.65
VCL-201ENST00000211998 POTEBQ6S5H4 581 aa11□□□□□ -0.65
VCL-201ENST00000211998 LPCAT2Q7L5N7 544 aa11□□□□□ -0.65
VCL-201ENST00000211998 RHPN2Q8IUC4 686 aa11□□□□□ -0.65
VCL-201ENST00000211998 SCUBE1Q8IWY4 988 aa11□□□□□ -0.65
VCL-201ENST00000211998 ALKBH8Q96BT7 664 aaKnown RBP11□□□□□ -0.65
VCL-201ENST00000211998 ERP44Q9BS26 406 aa11□□□□□ -0.65
VCL-201ENST00000211998 PTCH1Q13635 1447 aa11□□□□□ -0.65
VCL-201ENST00000211998 ARAP3Q8WWN8 1544 aa10.99□□□□□ -0.65
VCL-201ENST00000211998 CDK8P49336 464 aa10.99□□□□□ -0.65
VCL-201ENST00000211998 KCNMA1Q12791 1236 aa10.99□□□□□ -0.65
VCL-201ENST00000211998 DRAP1Q14919 205 aaPredicted RBP10.99□□□□□ -0.65
VCL-201ENST00000211998 WASHC2DQ5SRD0 308 aa10.99□□□□□ -0.65
VCL-201ENST00000211998 MICU2Q8IYU8 434 aa10.99□□□□□ -0.65
VCL-201ENST00000211998 SCG3Q8WXD2 468 aaKnown RBP10.99□□□□□ -0.65
VCL-201ENST00000211998 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.99□□□□□ -0.65
VCL-201ENST00000211998 COA7Q96BR5 231 aa10.99□□□□□ -0.65
VCL-201ENST00000211998 EHD4Q9H223 541 aa10.99□□□□□ -0.65
VCL-201ENST00000211998 ALDH8A1Q9H2A2 487 aaPredicted RBP10.99□□□□□ -0.65
VCL-201ENST00000211998 RAB21Q9UL25 225 aa10.99□□□□□ -0.65
VCL-201ENST00000211998 H7C1W4 665 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms