RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 DACT1Q9NYF0 836 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 CTNNAL1Q9UBT7 734 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 SH3GLB1Q9Y371 365 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 TRIM17Q9Y577 477 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 TRIM38O00635 465 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 CYP17A1P05093 508 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 H2AFZP0C0S5 128 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 VAMP7P51809 220 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 TEAD4Q15561 434 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 SYDE2Q5VT97 1194 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 H2AFVQ71UI9 128 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 RUBCNQ92622 972 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 USE1Q9NZ43 259 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 GHRLQ9UBU3 117 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 MRPS17Q9Y2R5 130 aaKnown RBP3.63□□□□□ -1.83
NEB-201ENST00000172853 SGSM2O43147 1006 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 LYNP07948 512 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 C6orf222P0C671 652 aaPredicted RBP3.63□□□□□ -1.83
NEB-201ENST00000172853 CETPP11597 493 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 RXRAP19793 462 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 CDC27P30260 824 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 OLFML2BQ68BL8 750 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 RRAGAQ7L523 313 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 ANKRD44Q8N8A2 993 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 FAM89AQ96GI7 184 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 CALN1Q9BXU9 219 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 BRD8Q9H0E9 1235 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 SPASTQ9UBP0 616 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 SATB2Q9UPW6 733 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 IQGAP2Q13576 1575 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 EYA2O00167 538 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 USP17L8P0C7I0 530 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 CYP2C19P33261 490 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 PPIL2Q13356 520 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 CNGA2Q16280 664 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 VASH1Q7L8A9 365 aaPredicted RBP3.63□□□□□ -1.83
NEB-201ENST00000172853 XAGE2Q96GT9 111 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 TNIP3Q96KP6 325 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 BBS2Q9BXC9 721 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 SERPINB13Q9UIV8 391 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 AMD1P17707 334 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 OR1G1P47890 313 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 DYNLT1P63172 113 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 CYP4Z1Q86W10 505 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 FAM13CQ8NE31 585 aa3.63□□□□□ -1.83
NEB-201ENST00000172853 KLRF2D3W0D1 207 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 CLDN3O15551 220 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 PCDH8O95206 1070 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 RRM2P31350 389 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 CTNNA1P35221 906 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 AP1S1P61966 158 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 CDC37Q16543 378 aaPredicted RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 TSPAN14Q8NG11 270 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 SPATA9Q9BWV2 254 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 ARL2BPQ9Y2Y0 163 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 PKP3Q9Y446 797 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 ADCY6O43306 1168 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 SOX6P35712 828 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 RUNX1T1Q06455 604 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 EDRF1Q3B7T1 1238 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 ARHGAP17Q68EM7 881 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 SPATS2Q86XZ4 545 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 DSELQ8IZU8 1212 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 ZNF614Q8N883 585 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 TSPAN17Q96FV3 270 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 SEPT5Q99719 369 aaPredicted RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 NT5C1AQ9BXI3 368 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 GPR63Q9BZJ6 419 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 CATSPERBQ9H7T0 1116 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 ZNF302Q9NR11 478 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 AHSPQ9NZD4 102 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 ZNF839A8K0R7 811 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 RASGRP1O95267 797 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 PIK3R1P27986 724 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 RAB2AP61019 212 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 CDO1Q16878 200 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 C8orf34Q49A92 452 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 CDKL3Q8IVW4 592 aaPredicted RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 SCGB2A1O75556 95 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 TRPA1O75762 1119 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 VCAM1P19320 739 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 PDAP1Q13442 181 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 ADAM9Q13443 819 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 ZNF557Q8N988 423 aaPredicted RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 BRINP2Q9C0B6 783 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 GOLPH3LQ9H4A5 285 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 WARS2Q9UGM6 360 aaKnown RBP3.62□□□□□ -1.83
NEB-201ENST00000172853 EVPLLA8MZ36 301 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 CUL3Q13618 768 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 NEK5Q6P3R8 708 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 MKL2Q9ULH7 1088 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 USP17L10C9JJH3 530 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 USP17L12C9JPN9 530 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 USP17L21D6R901 530 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 HIST1H2ABP04908 130 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 FGRP09769 529 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 AP3M2P53677 418 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 OXCT1P55809 520 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 TMEM164Q5U3C3 297 aa3.62□□□□□ -1.83
NEB-201ENST00000172853 TMEM154Q6P9G4 183 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms