RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ZDHHC14Q8IZN3 488 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 ANKRD35Q8N283 1001 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 CPA5Q8WXQ8 436 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 SCLT1Q96NL6 688 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 TRPC6Q9Y210 931 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 DNM1LO00429 736 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 RTN2O75298 545 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 FSBPO95073 299 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 PYGMP11217 842 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 KCNJ1P48048 391 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 LIG4P49917 911 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 CYP24A1Q07973 514 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 BIRC3Q13489 604 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 RHOT2Q8IXI1 618 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 SLC16A10Q8TF71 515 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 ZNF516Q92618 1163 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 GPRASP2Q96D09 838 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 SEC16BQ96JE7 1060 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 TEX13BQ9BXU2 312 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 OSBPL7Q9BZF2 842 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 R3HDMLQ9H3Y0 253 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 TMEM8AQ9HCN3 771 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 KLC4Q9NSK0 619 aa14.08□□□□□ -0.16
CTNS-201ENST00000046640 MAP3K20Q9NYL2 800 aaKnown RBP14.08□□□□□ -0.16
CTNS-201ENST00000046640 RPS12P25398 132 aaKnown RBP14.07□□□□□ -0.16
CTNS-201ENST00000046640 PDE6CP51160 858 aa14.07□□□□□ -0.16
CTNS-201ENST00000046640 PASD1Q8IV76 773 aa14.07□□□□□ -0.16
CTNS-201ENST00000046640 ZNF564Q8TBZ8 553 aaPredicted RBP14.07□□□□□ -0.16
CTNS-201ENST00000046640 SHC3Q92529 594 aa14.07□□□□□ -0.16
CTNS-201ENST00000046640 KIFAP3Q92845 792 aa14.07□□□□□ -0.16
CTNS-201ENST00000046640 IFT74Q96LB3 600 aa14.07□□□□□ -0.16
CTNS-201ENST00000046640 FMO2Q99518 471 aa14.07□□□□□ -0.16
CTNS-201ENST00000046640 ST6GALNAC4Q9H4F1 302 aa14.07□□□□□ -0.16
CTNS-201ENST00000046640 ACAD9Q9H845 621 aa14.07□□□□□ -0.16
CTNS-201ENST00000046640 SLC40A1Q9NP59 571 aa14.07□□□□□ -0.16
CTNS-201ENST00000046640 SLC12A6Q9UHW9 1150 aa14.07□□□□□ -0.16
CTNS-201ENST00000046640 P4HA2O15460 535 aa14.07□□□□□ -0.16
CTNS-201ENST00000046640 NLRP11P59045 1033 aaKnown RBP14.07□□□□□ -0.16
CTNS-201ENST00000046640 GPD1LQ8N335 351 aa14.07□□□□□ -0.16
CTNS-201ENST00000046640 ATP6V0A4Q9HBG4 840 aa14.07□□□□□ -0.16
CTNS-201ENST00000046640 GGT7Q9UJ14 662 aa14.07□□□□□ -0.16
CTNS-201ENST00000046640 SPDYE16A6NNV3 312 aaPredicted RBP14.06□□□□□ -0.16
CTNS-201ENST00000046640 TRAPPC3O43617 180 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 ATP4AP20648 1035 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 RFX1P22670 979 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 IFNAR2P48551 515 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 CDR1P51861 262 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 TREML2Q5T2D2 321 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 LRIG3Q6UXM1 1119 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 CATSPERGQ6ZRH7 1159 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 KLRG1Q96E93 195 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 CARD9Q9H257 536 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 DGAT1O75907 488 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 CFHP08603 1231 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 NF2P35240 595 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 HIRAP54198 1017 aaPredicted RBP14.06□□□□□ -0.16
CTNS-201ENST00000046640 R3HDM1Q15032 1099 aaKnown RBP14.06□□□□□ -0.16
CTNS-201ENST00000046640 E2F5Q15329 346 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 CCDC38Q502W7 563 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 ABHD15Q6UXT9 468 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 CCDC25Q86WR0 208 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 CACNA2D3Q8IZS8 1091 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 ASAP3Q8TDY4 903 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 FNBP1Q96RU3 617 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 CEP89Q96ST8 783 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 ZSWIM1Q9BR11 485 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 TARS2Q9BW92 718 aaKnown RBP14.06□□□□□ -0.16
CTNS-201ENST00000046640 SLITRK6Q9H5Y7 841 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 PTPRJQ12913 1337 aa14.06□□□□□ -0.16
CTNS-201ENST00000046640 GOLGA6L10A0A0M3HER8 536 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 MARK3P27448 753 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 POU5F1Q01860 360 aaKnown RBP14.05□□□□□ -0.16
CTNS-201ENST00000046640 SNX1Q13596 522 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 EMC2Q15006 297 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 TTC27Q6P3X3 843 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 CCDC91Q7Z6B0 441 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 UBL4BQ8N7F7 174 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 NLGN2Q8NFZ4 835 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 FAM212AQ96EL1 285 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 PAGR1Q9BTK6 254 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 DAAM1Q9Y4D1 1078 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 HGSO14964 777 aaPredicted RBP14.05□□□□□ -0.16
CTNS-201ENST00000046640 RDXP35241 583 aaKnown RBP14.05□□□□□ -0.16
CTNS-201ENST00000046640 PTENP60484 403 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 DRP2Q13474 957 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 SWT1Q5T5J6 900 aaKnown RBP14.05□□□□□ -0.16
CTNS-201ENST00000046640 SPATS2Q86XZ4 545 aaKnown RBP14.05□□□□□ -0.16
CTNS-201ENST00000046640 FMNL3Q8IVF7 1028 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 PRELID2Q8N945 189 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 MFSD14AQ96MC6 490 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 FAM118BQ9BPY3 351 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 NTPCRQ9BSD7 190 aaKnown RBP14.05□□□□□ -0.16
CTNS-201ENST00000046640 TIPINQ9BVW5 301 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 HAPLN2Q9GZV7 340 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 TTLL13PA6NNM8 815 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 FZD9O00144 591 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 GJC1P36383 396 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 MAP2K2P36507 400 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 GPC3P51654 580 aa14.05□□□□□ -0.16
CTNS-201ENST00000046640 IFI35P80217 286 aaPredicted RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms