RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Tas2r134Q7TQB0 298 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Afg3l2Q8JZQ2 802 aaKnown RBP12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Plekha4Q8VC98 588 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Scrn2Q8VCA8 425 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Med21Q9CQ39 144 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 LrgukQ9D5S7 820 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Dip2aQ8BWT5 1523 aa12.34□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Gm6657A0A1B0GRJ3 277 aa12.33□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Prl2c2P04095 224 aa12.33□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Gnat1P20612 350 aa12.33□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Nsun7Q14AW5 724 aa12.33□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Itih3Q61704 889 aa12.33□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Ush1gQ80T11 461 aa12.33□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Rhot1Q8BG51 631 aa12.33□□□□□ -0.43
Ndc1-204ENSMUST00000139560 CenpuQ8C4M7 410 aa12.33□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Gpsm2Q8VDU0 679 aa12.33□□□□□ -0.43
Ndc1-204ENSMUST00000139560 Chit1Q9D7Q1 464 aa12.33□□□□□ -0.43
Ndc1-204ENSMUST00000139560 RalaP63321 206 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Ankrd34bQ3UUF8 508 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Ddx42Q810A7 929 aaKnown RBP12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Neto2Q8BNJ6 525 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 N4bp3Q8C7U1 537 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Q8CIL4 281 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Hdac11Q91WA3 347 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Cdk5rap3Q99LM2 503 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Rnaseh2aQ9CWY8 301 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Rnf6Q9DBU5 667 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Mettl7bQ9DD20 244 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Tob2Q9JM55 345 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Ddx39bQ9Z1N5 428 aaKnown RBP12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Rab6bP61294 208 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Vamp7P70280 220 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Chi3l1Q61362 389 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Tpd52Q62393 224 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Ptk6Q64434 451 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Snx19Q6P4T1 997 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Dennd2cQ6P9P8 914 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Trim17Q7TPM3 477 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Sept10Q8C650 452 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Dis3Q9CSH3 958 aaKnown RBP12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 BcamQ9R069 622 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Rnf17Q99MV7 1640 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Gm3424L7N298 263 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Gm8246M0QWX9 263 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Q3KNL4 93 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Peg10Q7TN75 958 aaKnown RBP12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Skida1Q80YR3 822 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Apol9bQ8C7I4 310 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Prpf31Q8CCF0 499 aaKnown RBP12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Apol9aQ8VDU3 310 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 PudpQ9D5U5 234 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Hic1Q9R1Y5 733 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Tnni1Q9WUZ5 187 aa12.33□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Klhl18A0A0G2JGN5 579 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 C87977A2A958 498 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Msh3P13705 1091 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Igfbp4P47879 254 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 RenbpP82343 430 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Mark3Q03141 753 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Dsg1aQ61495 1057 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Zfp418Q8BFS8 652 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Gga1Q8R0H9 635 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Mtmr4Q91XS1 1190 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Nudt5Q9JKX6 218 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Raph1F2Z3U3 1266 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Gm1758F6VZZ1 202 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Krt35Q497I4 455 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Ttc39bQ8BYY4 617 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Strip2Q8C9H6 844 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Zbtb44Q8R0A2 453 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 IscuQ9D7P6 168 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Rhobtb1Q9DAK3 695 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Flt1P35969 1333 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 FscbA1EGX6 1074 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Znf711A2ANX9 761 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Gm3173A6NAS3 172 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Slc4a9E9PUP3 929 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Gm3020E9Q3J7 150 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Gm2897K7N6T7 172 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Nrg3O35181 713 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 L1camP11627 1260 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Hspa4lP48722 838 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 TdgP56581 421 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 NficP70255 439 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Fam102aQ78T81 392 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Psmd5Q8BJY1 504 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Ttc22Q8C159 568 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Gm3411Q8C7R2 150 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Paip2bQ91W45 136 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Setd3Q91WC0 594 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Nmd3Q99L48 503 aaKnown RBP12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Ppp1r12aQ9DBR7 1029 aaKnown RBP12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Exoc4O35382 975 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Psma2P49722 234 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Fam92bQ3V2J0 292 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Med15Q924H2 789 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 GrapQ9CX99 217 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Cuedc2Q9CXX9 284 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 MrgbpQ9DAT2 204 aa12.32□□□□□ -0.44
Ndc1-204ENSMUST00000139560 Cse1lQ9ERK4 971 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 10.5 ms