RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 RnpepQ8VCT3 650 aaKnown RBP14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Creld2Q9CYA0 350 aa14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Mxra8Q9DBV4 442 aa14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Zscan4-ps3A0A1B0GRH6 506 aa14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Zscan4-ps2A0A1C7CYU6 506 aa14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 UrosP51163 265 aa14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Tdpoz4Q6YCH2 370 aa14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Olfr1415Q7TQS4 311 aa14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Phf20l1Q8CCJ9 1013 aa14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Tbc1d22aQ8R5A6 516 aa14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Olfr1416Q8VGU4 312 aa14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Rnf181Q9CY62 165 aa14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 JmyQ9QXM1 983 aa14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Olfr1354E9Q5G9 310 aa14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Gm3182K7N6T8 263 aa14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Tmtc1Q3UV71 942 aa14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Myl6Q60605 151 aaKnown RBP14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Daam2Q80U19 1115 aa14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Pqbp1Q91VJ5 263 aaKnown RBP14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Prmt7Q922X9 692 aa14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Rnf112Q96DY5 654 aa14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Krt17Q9QWL7 433 aa14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Gabbr1Q9WV18 960 aa14.24□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Gm3371F7CQW8 167 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Kcnu1O54982 1121 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 CopeO89079 308 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 SftpdP50404 374 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Rnf40Q3U319 1001 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Ppp4r3cQ3V0Y1 813 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Prmt6Q6NZB1 378 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Tdpoz2Q717B2 364 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 VcpkmtQ8C436 228 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Kct2Q8K201 259 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Tbc1d19Q8VDV7 526 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 PpanQ91YU8 470 aaKnown RBP14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Zfp64Q99KE8 643 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Tmem39aQ9CYC3 486 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Nudt12Q9DCN1 462 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Pdk2Q9JK42 407 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Diaph3Q9Z207 1171 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Vmn2r63E9Q0K5 859 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Gm9268E9Q0M3 861 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Vmn2r62K7N712 859 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Mcf2lQ64096 1149 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Neto2Q8BNJ6 525 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Uba3Q8C878 462 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 A430089I19RikQ8C9W1 407 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Cpb2Q9JHH6 422 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Nr1h3Q9Z0Y9 445 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Serpinh1P19324 417 aaKnown RBP14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 S100bP50114 92 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 TchpQ3TVW5 497 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 A1cfQ5YD48 595 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Gemin4Q6P6L6 1058 aaKnown RBP14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Tmem145Q8C4U2 746 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 4921504E06RikQ8CET2 560 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Plcb4Q91UZ1 1175 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Lpin2Q99PI5 893 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Sfmbt1Q9JMD1 863 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Gm28036V9GXJ1 658 aa14.23□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Btbd18A0A0A6YY25 723 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Gm5926E9PWJ8 236 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Stra6O70491 670 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Abcb1bP06795 1276 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Rab20P35295 233 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Lrch1P62046 709 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 SnrpfP62307 86 aaKnown RBP14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Nr1d1Q3UV55 615 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Tp53i13Q5F267 385 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 NntQ61941 1086 aaKnown RBP14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Ddr2Q62371 854 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Gdap1l1Q8VE33 370 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Uap1Q91YN5 522 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Phtf1Q9QZ09 761 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Syngap1F6SEU4 1340 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Fer1l6E0CZ42 1862 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Ace3D0G895 737 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 4930544D05RikJ3QK56 214 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Phka1P18826 1241 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Cd68P31996 326 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Rufy4Q3TYX8 563 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Srrm1Q52KI8 946 aaKnown RBP14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Klra5Q60652 266 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Sin3bQ62141 1098 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Gucy2gQ6TL19 1100 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Ssxb10Q6XAR7 170 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Bpifb6Q8BU51 449 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Fndc3aQ8BX90 1198 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Leng8Q8CBY3 785 aaKnown RBP14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Ap3m2Q8R2R9 418 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Rtn3Q9ES97 964 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Eif2ak3Q9Z2B5 1114 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Sned1Q70E20 1403 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Gm7995L7N2E4 160 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Cyp2c39P56656 490 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Ect2Q07139 913 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Cyfip2Q5SQX6 1253 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Plppr4Q7TME0 766 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Sh3tc2Q80VA5 1289 aa14.22□□□□□ -0.13
Clcn3-204ENSMUST00000110301 Mageb18Q8BQR7 327 aa14.22□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms