RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Ndufs6P52503 116 aa22.79■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Pcbp1P60335 356 aaKnown RBP22.79■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Ddx3yQ62095 658 aaKnown RBP22.79■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Lamtor4Q8CF66 99 aa22.79■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Rnf25Q9QZR0 456 aa22.79■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Nlrc5C3VPR6 1915 aa22.79■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 TdgP56581 421 aa22.79■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Trim72Q1XH17 477 aa22.79■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Tcaf3Q6QR59 914 aa22.79■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Bola2Q8BGS2 86 aa22.79■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Aldh5a1Q8BWF0 523 aa22.79■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Slc26a6Q8CIW6 758 aa22.79■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Serpina10Q8R121 448 aa22.79■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Ccdc12Q8R344 166 aaKnown RBP22.79■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Znf354bQ9QXT9 601 aa22.79■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Ptchd4B9EKX1 904 aa22.78■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 FdxrQ61578 494 aa22.78■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Q6PD19 689 aa22.78■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Zbed4Q80WQ9 1168 aa22.78■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Psmd5Q8BJY1 504 aa22.78■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Stxbp5Q8K400 1152 aaKnown RBP22.78■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Dusp19Q8K4T5 220 aa22.78■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Ftsj3Q9DBE9 838 aaKnown RBP22.78■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Tnfrsf10bQ9QZM4 381 aa22.78■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Gucy2dA0A0U1RPR8 1117 aa22.77■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Mmp3P28862 477 aa22.77■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Gjb6P70689 261 aa22.77■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 FancbQ5XJY6 703 aa22.77■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Slc26a2Q62273 739 aa22.77■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Spata7Q80VP2 582 aa22.77■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Klhl36Q8R124 613 aa22.77■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Bud13Q8R149 637 aa22.77■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 AdigQ8R400 80 aa22.77■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Uap1Q91YN5 522 aa22.77■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Dbndd2Q9CRD4 158 aa22.77■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Cdc42ep4Q9JM96 349 aaKnown RBP22.77■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Adgrf5G5E8Q8 1348 aa22.77■■□□□ 1.24
Ccdc88a-202ENSMUST00000109477 Rnf19bA2A7Q9 732 aa22.77■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Slc16a6B1AT66 607 aa22.77■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Ldlrad1D3YYZ1 218 aa22.77■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Tnfrsf18O35714 228 aa22.77■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Glud1P26443 558 aaKnown RBP22.77■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Ptgs2Q05769 604 aa22.77■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Rnf113a2Q14B01 337 aa22.77■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Skap1Q3UUV5 355 aa22.77■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Zbtb8osQ505B7 168 aa22.77■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Ptpn18Q61152 453 aa22.77■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Maats1Q8BRC6 783 aa22.77■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Phka2Q8BWJ3 1235 aa22.77■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Dmtf1Q8CE22 761 aa22.77■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Defb19Q8K3I8 83 aa22.77■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Olfr1494Q8VGP8 315 aa22.77■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Gtf3c6Q9D8P7 227 aa22.77■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Rab27aQ9ERI2 221 aa22.77■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Sclt1G5E861 688 aa22.76■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Tnnc2P20801 160 aa22.76■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Cd86P42082 309 aa22.76■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Nkx2-5P42582 318 aa22.76■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Mapk6Q61532 720 aa22.76■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Ddx3xQ62167 662 aaKnown RBP22.76■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Taf2Q8C176 1104 aa22.76■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Fam160b1Q8CDM8 764 aa22.76■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Kct2Q8K201 259 aa22.76■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Ces1fQ91WU0 561 aa22.76■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Irx4Q9QY61 515 aa22.76■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 2210011C24RikA0A087WQ89 206 aa22.75■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Plekhg4A0A1L1SU27 1217 aa22.75■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Olfr552E9Q545 317 aa22.75■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Pth1rP41593 591 aa22.75■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Rnpc3Q3UZ01 514 aaKnown RBP22.75■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Dsg1aQ61495 1057 aa22.75■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Gnl3Q8CI11 538 aaKnown RBP22.75■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Olfr1499Q8VG65 314 aa22.75■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Pcdha9Q91Y11 979 aa22.75■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Gtf2h1Q9DBA9 547 aa22.75■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Dkc1Q9ESX5 509 aaKnown RBP22.75■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Col5a3Q9JLI2 1739 aa22.75■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Spata31d1aE9QA35 1336 aa22.75■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Prdm12A2AJ77 365 aa22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 MsnP26041 577 aaKnown RBP22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 SPINDOCQ05AH6 381 aa22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 BC051142Q3V0M8 400 aa22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Vcpip1Q8CDG3 1220 aa22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Adgrg3Q8R0T6 542 aa22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Asb7Q91ZU0 318 aa22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 VasnQ9CZT5 673 aa22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Zfyve19Q9DAZ9 389 aa22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 MesdQ9ERE7 224 aa22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Gon4lQ9DB00 2260 aa22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Kntc1Q8C3Y4 2207 aa22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Trim12cD3Z3L3 497 aa22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Ttc39dQ0VF76 604 aa22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Trim25Q61510 634 aaKnown RBP22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Snx19Q6P4T1 997 aa22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Iqcb1Q8BP00 598 aa22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Gtpbp10Q8K013 366 aa22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Asah2Q9JHE3 756 aa22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Trpc3Q9QZC1 836 aa22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Adam22Q9R1V6 904 aa22.74■■□□□ 1.23
Ccdc88a-202ENSMUST00000109477 Vmn2r55G3UWZ4 781 aa22.73■■□□□ 1.23
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms