RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Ccdc169Q8BXX9 214 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Usp37Q8C0R0 979 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 NcaldQ91X97 193 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Sec14l2Q99J08 403 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Ptgdr2Q9Z2J6 382 aa13.78□□□□□ -0.2
Nup88-203ENSMUST00000108531 Oip5A2AQ14 241 aa13.77□□□□□ -0.21
Nup88-203ENSMUST00000108531 Ttll6A4Q9E8 822 aa13.77□□□□□ -0.21
Nup88-203ENSMUST00000108531 CopeO89079 308 aa13.77□□□□□ -0.21
Nup88-203ENSMUST00000108531 Ephb2P54763 986 aa13.77□□□□□ -0.21
Nup88-203ENSMUST00000108531 Tbc1d22bQ80VE5 505 aa13.77□□□□□ -0.21
Nup88-203ENSMUST00000108531 Dusp4Q8BFV3 398 aa13.77□□□□□ -0.21
Nup88-203ENSMUST00000108531 Pcdhb3Q91XZ7 784 aa13.77□□□□□ -0.21
Nup88-203ENSMUST00000108531 Foxp3Q99JB6 429 aa13.77□□□□□ -0.21
Nup88-203ENSMUST00000108531 Wdr83Q9DAJ4 315 aaKnown RBP13.77□□□□□ -0.21
Nup88-203ENSMUST00000108531 Tlr9Q9EQU3 1032 aa13.77□□□□□ -0.21
Nup88-203ENSMUST00000108531 Cnga3Q9JJZ8 631 aa13.77□□□□□ -0.21
Nup88-203ENSMUST00000108531 Smchd1Q6P5D8 2007 aaKnown RBP13.77□□□□□ -0.21
Nup88-203ENSMUST00000108531 Zscan4-ps3A0A1B0GRH6 506 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Zscan4-ps2A0A1C7CYU6 506 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Clrn2B2RVW2 232 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 CaluO35887 315 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Phka1P18826 1241 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 PtpreP49446 699 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Psmc5P62196 406 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Mfsd14aP70187 490 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 NfiaQ02780 532 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Aars2Q14CH7 980 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Fam193bQ3U2K0 892 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Rnf10Q3UIW5 804 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Gm4952Q5FW57 296 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 CpQ61147 1061 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 EtnpplQ8BWU8 499 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Shtn1Q8K2Q9 631 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Cpa5Q8R4H4 436 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Tlr3Q99MB1 905 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Znf654Q9DAU9 571 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Usp29Q9ES63 869 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Sv2aQ9JIS5 742 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Fem1bQ9Z2G0 627 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Zfp839E9PUU5 921 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Gm21973F6WEZ7 68 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Rrm1P07742 792 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Krt19P19001 403 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Marcksl1P28667 200 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 GckP52792 465 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Lrch1P62046 709 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Adcy8P97490 1249 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Spink5Q148R4 1017 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 GmncQ3URY2 333 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Fam92bQ3V2J0 292 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Elf1Q60775 612 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Soat1Q61263 540 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Trim21Q62191 470 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Epc2Q8C0I4 808 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Pnma1Q8C1C8 353 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Hectd2Q8CDU6 774 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Cyp2d26Q8CIM7 500 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Defb15Q8R2I5 79 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Nr3c2Q8VII8 978 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Mfsd5Q921Y4 450 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Golga1Q9CW79 758 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 PycardQ9EPB4 193 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Cntn6Q9JMB8 1028 aa13.76□□□□□ -0.21
Nup88-203ENSMUST00000108531 Gm5926E9PWJ8 236 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Zfp212G3X8R7 492 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Gm10436L7N1Y3 520 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Gm4758L7N258 96 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Gm7995L7N2E4 160 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Tnfrsf18O35714 228 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Mybl1P51960 751 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 CcnjlQ5SRT8 387 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 ChukQ60680 745 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Krt77Q6IFZ6 572 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Slc9c1Q6UJY2 1175 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 SnphQ80U23 495 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Cdk9Q99J95 372 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Spc24Q9D083 201 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Q9DA42 136 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Ggt5Q9Z2A9 573 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Gm13084A2A8N0 494 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Lrrc10bG3XA50 292 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 WlsQ6DID7 541 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Sned1Q70E20 1403 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 LnpkQ7TQ95 425 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Q80WR5 230 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Zfp120Q8BZW4 436 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Cwf19l1Q8CI33 537 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Btbd6Q8K2J9 488 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Ero1aQ8R180 464 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Q9CYI0 393 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Capn15Q9JLG8 1095 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Rnf25Q9QZR0 456 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Atrnl1Q6A051 1378 aa13.75□□□□□ -0.21
Nup88-203ENSMUST00000108531 Pus7B7ZNL8 666 aaKnown RBP13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Gcnt4E9Q649 455 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 TazI7HJS2 263 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Ptp4a2O70274 167 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Ctnnal1O88327 731 aa13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Eno1P17182 434 aaKnown RBP13.74□□□□□ -0.21
Nup88-203ENSMUST00000108531 Foxp2P58463 714 aa13.74□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms