RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Nptx2O70340 429 aa24.44■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Srebf2Q3U1N2 1130 aa24.44■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Inppl1Q6P549 1257 aa24.44■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Fam109aQ8BH49 266 aa24.44■■□□□ 1.5
Scn1b-201ENSMUST00000098548 LarsQ8BMJ2 1178 aa24.44■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Hook3Q8BUK6 718 aa24.44■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Ccdc169Q8BXX9 214 aa24.44■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Sppl3Q9CUS9 384 aa24.44■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Ankef1Q9D2J7 775 aa24.44■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Morc1Q9WVL5 950 aa24.44■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Slc16a6B1AT66 607 aa24.43■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Card6E9PWH2 1175 aa24.43■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Fmr1P35922 614 aaKnown RBP24.43■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Gfpt1P47856 697 aa24.43■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Tnnt2P50752 301 aa24.43■■□□□ 1.5
Scn1b-201ENSMUST00000098548 NeblQ0II04 452 aa24.43■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Git1Q68FF6 770 aa24.43■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Ano5Q75UR0 904 aa24.43■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Ctdp1Q7TSG2 960 aa24.43■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Elac2Q80Y81 831 aaKnown RBP24.43■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Clstn3Q99JH7 956 aa24.43■■□□□ 1.5
Scn1b-201ENSMUST00000098548 1700016D06RikQ9DAA5 166 aa24.43■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Tpcn1Q9EQJ0 817 aa24.43■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Ercc4Q9QZD4 917 aa24.43■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Igkv10-96A0A140T8M1 115 aa24.42■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Cyth3O08967 399 aa24.42■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Tbx3P70324 741 aa24.42■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Klra9Q2TJJ8 266 aa24.42■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Lrig2Q52KR2 1054 aa24.42■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Gm11487Q5RIS0 354 aa24.42■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Six2Q62232 296 aa24.42■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Frmd3Q8BHD4 595 aa24.42■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Tmem39aQ9CYC3 486 aa24.42■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Obsl1D3YYU8 1804 aaKnown RBP24.42■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Ccdc152E9PX14 254 aa24.42■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Inpp5jP59644 1003 aa24.42■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Rapgef1Q3UHC1 1224 aa24.42■■□□□ 1.5
Scn1b-201ENSMUST00000098548 P3h1Q3V1T4 739 aa24.42■■□□□ 1.5
Scn1b-201ENSMUST00000098548 R3hdm4Q4VBF2 262 aa24.42■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Tsr1Q5SWD9 803 aa24.42■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Dbndd2Q9CRD4 158 aa24.42■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Gm10110D3Z5M2 615 aa24.41■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Vmn2r63E9Q0K5 859 aa24.41■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Gm9268E9Q0M3 861 aa24.41■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Vmn2r62K7N712 859 aa24.41■■□□□ 1.5
Scn1b-201ENSMUST00000098548 AdssP46664 456 aa24.41■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Arf4P61750 180 aa24.41■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Cdr2P97817 455 aa24.41■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Tmem232Q5K6N0 675 aa24.41■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Asap3Q5U464 904 aa24.41■■□□□ 1.5
Scn1b-201ENSMUST00000098548 PoliQ6R3M4 717 aa24.41■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Actn1Q7TPR4 892 aaKnown RBP24.41■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Gpr37l1Q99JG2 481 aa24.41■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Mageb3Q9D2H4 330 aa24.41■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Trim54Q9ERP3 366 aa24.41■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Kcnq4Q9JK97 696 aa24.41■■□□□ 1.5
Scn1b-201ENSMUST00000098548 DgkeQ9R1C6 564 aa24.41■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Arih2Q9Z1K6 492 aa24.41■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Ttc13A0A1L1SSC7 844 aa24.4■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Mmrn2A6H6E2 943 aa24.4■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Zfr2E9Q5M4 874 aa24.4■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Tnfrsf11aO35305 625 aa24.4■■□□□ 1.5
Scn1b-201ENSMUST00000098548 rp9P97762 213 aa24.4■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Nhej1Q3KNJ2 295 aa24.4■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Uimc1Q5U5Q9 727 aa24.4■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Zfp251Q6PCX8 632 aa24.4■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Ankfy1Q810B6 1169 aa24.4■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Q8BGN9 141 aa24.4■■□□□ 1.5
Scn1b-201ENSMUST00000098548 MicalclQ9D5U9 680 aa24.4■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Rab27aQ9ERI2 221 aa24.4■■□□□ 1.5
Scn1b-201ENSMUST00000098548 H2-OaQ9QWV1 250 aa24.4■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Prl6a1O35257 230 aa24.39■■□□□ 1.5
Scn1b-201ENSMUST00000098548 NcanP55066 1268 aa24.39■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Mfsd14aP70187 490 aa24.39■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Gjb6P70689 261 aa24.39■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Hhla1Q3TYV2 514 aa24.39■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Abi3bpQ59IW6 1179 aa24.39■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Xkr5Q5GH66 676 aa24.39■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Klra6Q60653 266 aa24.39■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Spag5Q7TME2 1165 aa24.39■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Slc9a7Q8BLV3 726 aa24.39■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Rapgef5Q8C0Q9 814 aa24.39■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Dusp19Q8K4T5 220 aa24.39■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Ergic2Q9CR89 377 aa24.39■■□□□ 1.5
Scn1b-201ENSMUST00000098548 Sema4dO09126 861 aa24.38■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Gad1P48318 593 aa24.38■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Rnpc3Q3UZ01 514 aaKnown RBP24.38■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Dusp11Q6NXK5 321 aaKnown RBP24.38■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Cd300aQ6SJQ0 318 aa24.38■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Psmd5Q8BJY1 504 aa24.38■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Ccser1Q8C0C4 895 aa24.38■■□□□ 1.49
Scn1b-201ENSMUST00000098548 TxlnbQ8VBT1 685 aa24.38■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Rbm10Q99KG3 930 aaKnown RBP24.38■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Ddx50Q99MJ9 734 aaKnown RBP24.38■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Slc5a4aQ9ET37 656 aa24.38■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Sertad2Q9JJG5 309 aa24.38■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Snx12O70493 165 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Znhit6Q3UFB2 460 aaKnown RBP24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Carmil2Q3V3V9 1296 aa24.37■■□□□ 1.49
Scn1b-201ENSMUST00000098548 Sh3gl1Q62419 368 aa24.37■■□□□ 1.49
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms