RNA–Protein interactions for RNA: ENSMUST00000088790.8

Ret-202, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ret, Length 4,497 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-202ENSMUST00000088790 Thap3Q8BJ25 218 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Wdr35Q8BND3 1181 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Agap1Q8BXK8 857 aaKnown RBP16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Ppp1r11Q8K1L5 131 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 NonoQ99K48 473 aaKnown RBP16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Tdrd1Q99MV1 1172 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Rpap3Q9D706 660 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Nsmce1Q9D720 266 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Doc2gQ9ESN1 387 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Tnrc6bQ8BKI2 1810 aaKnown RBP16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Slc6a16A0A1L1SR47 742 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Serpinb3aG3X9V8 387 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 PkmP52480 531 aaKnown RBP16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Kcnn2P58390 839 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Dnajc5P60904 198 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Ttc39dQ0VF76 604 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Tmem145Q8C4U2 746 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Nkiras1Q8CEC5 192 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Dusp19Q8K4T5 220 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Eif3eP60229 445 aaKnown RBP16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 PRAG1Q571I4 1179 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 CpQ61147 1061 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Tmem120aQ8C1E7 343 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Dcaf8Q8N7N5 591 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Cdk5rap3Q99LM2 503 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Ddx56Q9D0R4 546 aaKnown RBP16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Trim5E9PV98 497 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 E230025N22RikG5E8S3 482 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Siglec10Q80ZE3 688 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 Phka2Q8BWJ3 1235 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 OafQ8QZR4 282 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 PfasQ5SUR0 1337 aa16.8■□□□□ 0.28
Ret-202ENSMUST00000088790 GclmO09172 274 aaKnown RBP16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Mark3Q03141 753 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 9130409I23RikQ3TS87 320 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 FntaQ61239 377 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Sept10Q8C650 452 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Pde10aQ8CA95 790 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Usp27Q8CEG8 438 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Mtfr1lQ9CWE0 289 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 LrmdaQ9D9B4 229 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Tjp3Q9QXY1 905 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Rfwd2Q9R1A8 733 aaKnown RBP16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Slc22a3Q9WTW5 551 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Serpinb3cA2RSF9 386 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Arhgap4B1AUY3 965 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 D830030K20RikE9PYQ5 218 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Gm3095E9Q058 166 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Gm3043K7N693 218 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Gm16440K7N6G6 218 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Gm2244L7N2A3 218 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Gm3278L7N2D2 218 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Gm8271L7N2E2 218 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Casp8O89110 480 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Arpp19P56212 112 aaKnown RBP16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Stx1bP61264 288 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Gprin1Q3UNH4 932 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Tmtc4Q8BG19 741 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Chtf18Q8BIW9 969 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Setd6Q9CWY3 473 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Krt16Q9Z2K1 469 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 AtrnQ9WU60 1428 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Rfx8D3YU81 596 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Mdm4O35618 489 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 RpsaP14206 295 aaKnown RBP16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Bace1P56818 501 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 GmpsQ3THK7 693 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Fam198bQ3UPI1 517 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Tas2r134Q7TQB0 298 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Rbbp5Q8BX09 538 aaKnown RBP16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Fndc3aQ8BX90 1198 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 HscbQ8K3A0 234 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Ugp2Q91ZJ5 508 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Ubiad1Q9DC60 336 aa16.79■□□□□ 0.28
Ret-202ENSMUST00000088790 Gm6370A0A0G2JGX9 315 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 SelenovD3YXG1 328 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Gm6309L7N481 315 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Nol4P60954 483 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Col6a1Q04857 1025 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Ice2Q3UZ18 988 aaKnown RBP16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Caprin1Q60865 707 aaKnown RBP16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Ezh2Q61188 746 aaKnown RBP16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Myo6Q64331 1265 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Stkld1Q80YS9 662 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Adprhl2Q8CG72 370 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Trim32Q8CH72 655 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 CpzQ8R4V4 654 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 FdpsQ920E5 353 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Ccdc70Q9D9B0 223 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Nudt5Q9JKX6 218 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Chd4Q6PDQ2 1915 aaKnown RBP16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Bcl9Q9D219 1425 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Gm28360A0A087WR25 190 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Mcf2A2AEU1 1111 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Cacna2d1O08532 1103 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Mboat4P0C7A3 435 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Tll1Q62381 1013 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Dclk2Q6PGN3 756 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Arhgap15Q811M1 481 aa16.78■□□□□ 0.28
Ret-202ENSMUST00000088790 Borcs6Q9D6W8 360 aa16.78■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 25.4 ms