RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Foxo6Q70KY4 559 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Olfr301Q7TS04 311 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Pdia5Q921X9 517 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Actr3Q99JY9 418 aaKnown RBP10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Atp1b4Q99ME6 356 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Rpa3Q9CQ71 121 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Rhobtb3Q9CTN4 611 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Mms19Q9D071 1031 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Tfcp2Q9ERA0 502 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Diaph3Q9Z207 1171 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gm14525B1AZA0 212 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 CrnnD3YUU6 520 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gsta2P10648 222 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Cdc25bP30306 576 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Itgb8Q0VBD0 767 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gm10488Q4KL05 212 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gata6Q61169 589 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Arhgef1Q61210 920 aaKnown RBP10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gm14819Q62478 212 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Znf280dQ68FE8 974 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Alx1Q8C8B0 326 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 TatQ8QZR1 454 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 GlyctkQ8QZY2 523 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Tmem119Q8R138 280 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Klhl20Q8VCK5 604 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Lpgat1Q91YX5 370 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 1700020D05RikQ99PB1 294 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Arl8bQ9CQW2 186 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Prl7c1Q9CRB5 251 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 NarfQ9CYQ7 462 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Maf1Q9D0U6 258 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 4931423N10RikQ9D4J9 382 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Dbn1Q9QXS6 706 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Fkbp9Q9Z247 570 aa10.32□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Sh3pxd2bA2AAY5 908 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Znf711A2ANX9 761 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Cyp3a25O09158 503 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 GfapP03995 430 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Ido1P28776 407 aaKnown RBP10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Jak1P52332 1153 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Kcna2P63141 499 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Cct7P80313 544 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 VcpQ01853 806 aaKnown RBP10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Cyp2c54Q6XVG2 490 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Prl3a1Q78Y73 227 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 UnkQ8BL48 810 aaKnown RBP10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Drd5Q8BLD9 478 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Fam102bQ8BQS4 339 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Rab15Q8K386 212 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 RtcbQ99LF4 505 aaKnown RBP10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Cdk5rap3Q99LM2 503 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Cep19Q9CQA8 163 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Appbp2Q9DAX9 585 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Trim10Q9WUH5 489 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Psmd13Q9WVJ2 376 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Zscan12Q9Z1D7 501 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Syde2E9PUP1 1314 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 MeiocA2AG06 965 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Zfp780bE9Q2S6 806 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gm10639E9Q6L7 222 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gm340F6RGI3 1242 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Idh1O88844 414 aaKnown RBP10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Tagap1P0CAX8 505 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Hoxd10P28359 340 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Fkbp4P30416 458 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Lzts1P60853 599 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Polr2fP61219 127 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Mcl1P97287 331 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Pdap1Q3UHX2 181 aaKnown RBP10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Lrrc43Q3V0L5 667 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Tmem65Q4VAE3 234 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Ppp1r13bQ62415 1087 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Fgfr1opQ66JX5 399 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Glis3Q6XP49 780 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Bola2Q8BGS2 86 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Ppm1mQ8BU27 406 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Panx3Q8CEG0 392 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Mospd1Q8VEL0 213 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 GsdmcQ99NB5 468 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Fam187aQ9D3R5 417 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Mxra8Q9DBV4 442 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Ptpn4Q9WU22 926 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Zmym2Q9CU65 1376 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Col16a1Q8BLX7 1580 aa10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Zfc3h1B2RT41 1992 aaKnown RBP10.31□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Erich2E9Q1A6 463 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Trim15G3UY57 292 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Casp12O08736 419 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Sptlc1O35704 473 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Aldh2P47738 519 aaKnown RBP10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Adcy6Q01341 1165 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 HdxQ14B70 692 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gm5935Q497S0 212 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 GpkowQ56A08 488 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Grik1Q60934 836 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Gemin4Q6P6L6 1058 aaKnown RBP10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Rasa4Q6PFQ7 802 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Ldlrap1Q8C142 308 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Havcr2Q8VIM0 281 aa10.3□□□□□ -0.76
Hmgb1-201ENSMUST00000085546 Krt84Q99M73 603 aa10.3□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 23.6 ms