RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 PtpreP49446 699 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 rp9P97762 213 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Spink5Q148R4 1017 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Cnga4Q3UW12 575 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Ccdc160Q3UYG1 323 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Klra7Q60654 280 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Tfap2bQ61313 459 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Fbxo10Q7TQF2 950 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Wdr60Q8C761 999 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Mrgprx1Q8CIP3 322 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Afg3l2Q8JZQ2 802 aaKnown RBP14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Sumf1Q8R0F3 372 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Nt5c1bQ91YE9 573 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Spdl1Q923A2 608 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Snf8Q9CZ28 258 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 TarsQ9D0R2 722 aaKnown RBP14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 DmgdhQ9DBT9 869 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Ubiad1Q9DC60 336 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Slc15a2Q9ES07 729 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Hao1Q9WU19 370 aa14.32□□□□□ -0.12
Nup88-201ENSMUST00000035283 Ttc6G3UYY4 1857 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Vmn2r63E9Q0K5 859 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Gm9268E9Q0M3 861 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Prdm15E9Q8T2 1174 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Gm1661E9Q963 441 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Vmn2r62K7N712 859 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Ifnb1P01575 182 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 RalaP63321 206 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Ncf1Q09014 390 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Rnf10Q3UIW5 804 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Grid1Q61627 1009 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Tmem132dQ76HP3 1097 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Dclre1bQ8C7W7 541 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Tbrg4Q91YM4 630 aaKnown RBP14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Hars2Q99KK9 505 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Rbm31yQ9D3U4 565 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Cpb1B2RS76 415 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Speer4f2E9Q366 295 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Mdm4O35618 489 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Fmr1P35922 614 aaKnown RBP14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 AdssP46664 456 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Col6a1Q04857 1025 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 ZufspQ3T9Z9 577 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Pid1Q3UBG2 217 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Atp13a3Q5XF89 1219 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 FancbQ5XJY6 703 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Trim21Q62191 470 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Tfe3Q64092 572 aaKnown RBP14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Zswim6Q80TB7 1207 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Gprc5cQ8K3J9 440 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Caskin2Q8VHK1 1201 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Mfsd5Q921Y4 450 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Cd2bp2Q9CWK3 342 aaKnown RBP14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 Cnga3Q9JJZ8 631 aa14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 SmapQ9R0P4 181 aaKnown RBP14.31□□□□□ -0.12
Nup88-201ENSMUST00000035283 CopeO89079 308 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Pde6bP23440 856 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Rfx2P48379 717 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Edem3Q2HXL6 931 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Birc2Q62210 612 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Pla2g4cQ64GA5 597 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Zcwpw1Q6IR42 630 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Xpnpep1Q6P1B1 623 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 PimregQ8BFY7 231 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Orai2Q8BH10 250 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Zhx2Q8C0C0 836 aaKnown RBP14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 A430089I19RikQ8C9W1 407 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 NemfQ8CCP0 1064 aaKnown RBP14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Rell1Q8K2J7 272 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Apbb1ipQ8R5A3 670 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Angel1Q8VCU0 667 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Trex1Q91XB0 314 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Dnajc3Q91YW3 504 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Myh11O08638 1972 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 XdhQ00519 1335 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Unc13dB2RUP2 1085 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Gm5926E9PWJ8 236 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Cdc25cP48967 447 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Ripk2P58801 539 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 1810065E05RikQ5NC41 235 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 CpQ61147 1061 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Nlrp4eQ66X19 978 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Adgrg6Q6F3F9 1165 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Kiaa0391Q8JZY4 584 aaKnown RBP14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Lars2Q8VDC0 902 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Tdrd3Q91W18 743 aaKnown RBP14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Tmem174Q9DCX7 243 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Dgcr8Q9EQM6 773 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Nphs1Q9QZS7 1256 aa14.3□□□□□ -0.12
Nup88-201ENSMUST00000035283 Gm13084A2A8N0 494 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Lonrf2B2RT44 518 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Ttc7bE9Q6P5 843 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Barx2O08686 283 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Serpina1aP07758 413 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 PorP37040 678 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Serpina1cQ00896 412 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Serpina1dQ00897 413 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Prr7Q3V0I2 269 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Dzip1lQ499E4 774 aa14.29□□□□□ -0.12
Nup88-201ENSMUST00000035283 Cfap36Q8C6E0 343 aa14.29□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms