RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Clec4aQ9QZ15 238 aa13.12□□□□□ -0.31
Trim23-201ENSMUST00000022225 Gm45261A0A1B0GSP6 197 aa13.12□□□□□ -0.31
Trim23-201ENSMUST00000022225 Fam155bA2BDP1 471 aa13.12□□□□□ -0.31
Trim23-201ENSMUST00000022225 Gm3383J3QQ59 259 aa13.12□□□□□ -0.31
Trim23-201ENSMUST00000022225 Gm3164L7N2B9 238 aa13.12□□□□□ -0.31
Trim23-201ENSMUST00000022225 Gm3239L7N2D9 227 aa13.12□□□□□ -0.31
Trim23-201ENSMUST00000022225 Nedd4P46935 887 aaKnown RBP13.12□□□□□ -0.31
Trim23-201ENSMUST00000022225 Wdhd1P59328 1117 aa13.12□□□□□ -0.31
Trim23-201ENSMUST00000022225 Sh3rf1Q69ZI1 892 aa13.12□□□□□ -0.31
Trim23-201ENSMUST00000022225 Ntrk3Q6VNS1 825 aa13.12□□□□□ -0.31
Trim23-201ENSMUST00000022225 NrcamQ810U4 1256 aa13.12□□□□□ -0.31
Trim23-201ENSMUST00000022225 IarsQ8BU30 1262 aa13.12□□□□□ -0.31
Trim23-201ENSMUST00000022225 Slc39a11Q8BWY7 342 aa13.12□□□□□ -0.31
Trim23-201ENSMUST00000022225 Rpa3Q9CQ71 121 aa13.12□□□□□ -0.31
Trim23-201ENSMUST00000022225 Rsph3bQ9DA80 389 aa13.12□□□□□ -0.31
Trim23-201ENSMUST00000022225 MrgbpQ9DAT2 204 aa13.12□□□□□ -0.31
Trim23-201ENSMUST00000022225 Btbd19S4R1I0 287 aa13.12□□□□□ -0.31
Trim23-201ENSMUST00000022225 Ankrd63A2ARS0 390 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Ccnb1P24860 430 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Casp1P29452 402 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Fam91a1Q3UVG3 837 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Olfr832Q7TRG9 312 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Pex11aQ9Z211 246 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Zfp142G5E869 1843 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Osbpl7A2A716 963 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Rgs2O08849 211 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Sema6bO54951 886 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Mapkapk5O54992 473 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 HdcP23738 662 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 HpcaP84075 193 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 DselQ0VBN2 1207 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Ddb1Q3U1J4 1140 aaKnown RBP13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Arhgap17Q3UIA2 846 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 OgdhQ60597 1023 aaKnown RBP13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Birc2Q62210 612 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Pip5kl1Q6U7H8 395 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Snap47Q8R570 413 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Srfbp1Q9CZ91 441 aaKnown RBP13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Dnajc18Q9CZJ9 357 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 TarsQ9D0R2 722 aaKnown RBP13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Fam111aQ9D2L9 613 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Galnt15Q9D2N8 638 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Bcl2l12Q9D3J3 255 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Irs4Q9Z0Y7 1216 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Nme9A0A1L1SUL6 329 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Cav1P49817 178 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 ZufspQ3T9Z9 577 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Ccdc189Q6NZQ0 333 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Hsfy2Q80Y37 392 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Orai2Q8BH10 250 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Sema3dQ8BH34 777 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Nlrp4aQ8BU40 982 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Spire2Q8K1S6 718 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Slc18a1Q8R090 521 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Ptgdr2Q9Z2J6 382 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Astn1Q61137 1302 aa13.11□□□□□ -0.31
Trim23-201ENSMUST00000022225 Mia3Q8BI84 1930 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Ebf3O08791 596 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 CopeO89079 308 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Pms2P54279 859 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Col6a1Q04857 1025 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Ogfod1Q3U0K8 545 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Tdrd5Q5VCS6 1040 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Ugt1a9Q62452 528 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Slc25a19Q9DAM5 318 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Fthl17aQ9DAX0 182 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Ppp2r3cQ9JK24 453 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Ano3A2AHL1 981 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Zfc3h1B2RT41 1992 aaKnown RBP13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Klf1P46099 358 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Cdcp1Q5U462 833 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Usp8Q80U87 1080 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 GphnQ8BUV3 769 aaKnown RBP13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Sh2d5Q8JZW5 429 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Pofut2Q8VHI3 429 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Haus8Q99L00 373 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 AenQ9CZI9 336 aaKnown RBP13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Neurl2Q9D0S4 285 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Ubxn11Q9D572 484 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Rnf25Q9QZR0 456 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Zbtb11G5E8B9 1050 aaKnown RBP13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Tnfrsf11aO35305 625 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 AurkbO70126 345 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Atf2P16951 487 aaKnown RBP13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Grm2Q14BI2 872 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Ankmy2Q3TPE9 440 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Wdr70Q3TWF6 657 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Marveld2Q3UZP0 555 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Als2clQ60I26 952 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 N4bp1Q6A037 893 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Fam181bQ80VF6 417 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 BrdtQ91Y44 956 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Rbm5Q91YE7 815 aaKnown RBP13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Popdc2Q9ES82 367 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Mta2Q9R190 668 aa13.1□□□□□ -0.31
Trim23-201ENSMUST00000022225 Sh3tc1G3X9F6 1346 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Skor2A7M7C7 1008 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Gm8444F6XS56 118 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 Rrm1P07742 792 aa13.09□□□□□ -0.31
Trim23-201ENSMUST00000022225 HarsQ61035 509 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms