RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Fam118bQ8C569 351 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Abcf3Q8K268 709 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Trpm8Q8R4D5 1104 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Serpina9Q9D7D2 418 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Scn7aB1AYL1 1681 aa11.55□□□□□ -0.56
Msh3-201ENSMUST00000022220 Cfap221A9Q751 836 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ccnyl1D3YUJ3 367 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Gnat1P20612 350 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Uhmk1P97343 419 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Prom2Q3UUY6 835 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Orc2Q60862 576 aaKnown RBP11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Dnajc8Q6NZB0 253 aaKnown RBP11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Tas2r134Q7TQB0 298 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Fbxo38Q8BMI0 1194 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Calhm6Q8C9E8 313 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ubxn6Q99PL6 442 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Tjp2Q9Z0U1 1167 aaKnown RBP11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Gadd45gQ9Z111 159 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Heg1E9Q7X6 1337 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Btbd18A0A0A6YY25 723 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Wdr72D3YYM4 1114 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ctnnal1O88327 731 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 SpoplQ2M2N2 392 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Gm10488Q4KL05 212 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Dsg1aQ61495 1057 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Spa17Q62252 149 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Rab34Q64008 259 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Prr18Q6PAN7 307 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Kcnk18Q6VV64 394 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Serpina3bQ8BYY9 420 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Rapgef5Q8C0Q9 814 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Trim68Q8K243 485 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Tekt2Q922G7 430 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Emc2Q9CRD2 297 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Nxnl2Q9D531 156 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 IydQ9DCX8 285 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Trim10Q9WUH5 489 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Col18a1P39061 1774 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Lrriq4A6H6A4 596 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Zfp275G3X904 499 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Chil3O35744 398 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Sept7O55131 436 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Casp14O89094 257 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Mucl2P02815 138 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Casp4P70343 373 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Klra9Q2TJJ8 266 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 KhsrpQ3U0V1 748 aaKnown RBP11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 4933427I04RikQ3V053 235 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Mks1Q5SW45 561 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Wdr27Q8C5V5 780 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Q9D2Q3 444 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 MlklQ9D2Y4 472 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Rabl3Q9D4V7 236 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Gtf3c6Q9D8P7 227 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Rnf6Q9DBU5 667 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Abcb11Q9QY30 1321 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 PurbO35295 324 aaKnown RBP11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Myl1P05977 188 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Atoh1P48985 351 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 HpdP49429 393 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 OsbpQ3B7Z2 805 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Zfp943Q6NZP4 507 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Chmp2bQ8BJF9 213 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ildr1Q8CBR1 537 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Bcas3Q8CCN5 928 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 PdxkQ8K183 312 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ces1fQ91WU0 561 aa11.54□□□□□ -0.56
Msh3-201ENSMUST00000022220 Arhgap42B2RQE8 841 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Clcn3P51791 818 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Upf3bQ3ULL6 472 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Tgfbrap1Q3UR70 860 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Trappc3lQ4KL14 181 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Mettl25Q6NXH8 597 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Dpp9Q8BVG4 862 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Uba6Q8C7R4 1053 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Tph2Q8CGV2 488 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Cdk17Q8K0D0 523 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Q8R1Y2 203 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Trim42Q9D2H5 723 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Card9A2AIV8 536 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Mfsd4b4J3QNS5 503 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 HunkO88866 714 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Cd44P15379 778 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Rbp3P49194 1234 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 S100a5P63084 93 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Abl2Q4JIM5 1182 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 CcnjlQ5SRT8 387 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Neto2Q8BNJ6 525 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Anapc5Q8BTZ4 740 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 N4bp3Q8C7U1 537 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Il31raQ8K5B1 716 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 MyocdQ8VIM5 935 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Cdk9Q99J95 372 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Zbed3Q9D0L1 228 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Rilpl1Q9JJC6 406 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Scgb2b12S4R2L0 112 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Nwd2Q6P5U7 1742 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Slc35g2D3YVE8 412 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Olfr67F8VPJ8 320 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ephb2P54763 986 aa11.53□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms