RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 CblbQ3TTA7 982 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Xlr3aQ60595 226 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Zfp449Q8CB76 518 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Lrif1Q8CDD9 755 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Slc26a7Q8R2Z3 656 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Usp33Q8R5K2 909 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Tceal1Q921P9 165 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Cttnbp2nlQ99LJ0 638 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Spc24Q9D083 201 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Rab27aQ9ERI2 221 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Zfp612A0A1D5RMC2 672 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Usp51B1AY15 661 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Gpr161B2RPY5 545 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Nat8lQ3UGX3 299 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Miga1Q4QQM5 600 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Mks1Q5SW45 561 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 PigsQ6PD26 555 aaKnown RBP17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Fbxl13Q8CDU4 790 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Kat5Q8CHK4 513 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Haus3Q8QZX2 570 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Lrp2bpQ9D4C6 346 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Tmem68Q9D850 329 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Gdap2Q9DBL2 498 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Rasgrp1Q9Z1S3 795 aa17.97■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Pdzrn4E9PUZ9 1014 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Barx2O08686 283 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 HdcP23738 662 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Spg7Q3ULF4 781 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Cnga4Q3UW12 575 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Snap47Q8R570 413 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Gstm4Q8R5I6 218 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Olfr809Q8VEX8 328 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Psme4Q5SSW2 1843 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Megf6Q80V70 1572 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Fgfr4Q03142 799 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Ccdc127Q3TC33 260 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Togaram2Q3TYG6 1002 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 PhkbQ7TSH2 1085 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Zswim6Q80TB7 1207 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Frmd4aQ8BIE6 1020 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Sde2Q8K1J5 448 aaKnown RBP17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Trmt10bQ9D075 318 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Pgm1Q9D0F9 562 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Ftsj3Q9DBE9 838 aaKnown RBP17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Grem2O88273 168 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Ksr1Q61097 873 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Atl2Q6PA06 583 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Dnajc6Q80TZ3 938 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Fbxo43Q8CDI2 640 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Pcdhgb4Q91XX6 912 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Dbndd1Q9CZ00 160 aa17.96■□□□□ 0.47
Ctcf-201ENSMUST00000005841 Mroh5E9PUJ8 762 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Psmc4P54775 418 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Gm4952Q5FW57 296 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Msantd2Q6NZR2 559 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Rapgef5Q8C0Q9 814 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Pgm2l1Q8CAA7 621 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Btbd7Q8CFE5 1130 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Thoc1Q8R3N6 657 aaKnown RBP17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Kdm4bQ91VY5 1086 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Galntl5Q9D4M9 431 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 NfixP70257 488 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Rasgrf2P70392 1189 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Spink5Q148R4 1017 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Ankrd23Q812A3 306 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Ecel1Q9JMI0 775 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Olfr310B2RVZ1 332 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Esr2O08537 530 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Sema6bO54951 886 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Gbp1Q01514 589 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Cdk16Q04735 496 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Tmem65Q4VAE3 234 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Sestd1Q80UK0 696 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Pstpip2Q99M15 334 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Nap1l5Q9JJF0 156 aa17.95■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Qrich1Q3UA37 777 aa17.94■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Wdr41Q3UDP0 460 aa17.94■□□□□ 0.46
Ctcf-201ENSMUST00000005841 AsnsQ61024 561 aa17.94■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Gtpbp10Q8K013 366 aa17.94■□□□□ 0.46
Ctcf-201ENSMUST00000005841 2310002L09RikQ9D7L5 217 aa17.94■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Gtf3c6Q9D8P7 227 aa17.94■□□□□ 0.46
Ctcf-201ENSMUST00000005841 PapolbQ9WVP6 641 aa17.94■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Adam7O35227 789 aa17.94■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Rnf10Q3UIW5 804 aa17.94■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Gm5168Q4KL04 211 aa17.94■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Tfe3Q64092 572 aaKnown RBP17.94■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Slc39a13Q8BZH0 361 aa17.94■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Calhm6Q8C9E8 313 aa17.94■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Plscr2Q9DCW2 307 aa17.94■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Taf1Q80UV9 1891 aa17.94■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Kif5bQ61768 963 aa17.94■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Atp4aQ64436 1033 aa17.94■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Akt1s1Q9D1F4 257 aa17.94■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Ggt5Q9Z2A9 573 aa17.94■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Pcdh10E9PXQ7 1057 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Slc3a2P10852 526 aaKnown RBP17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Mark3Q03141 753 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Ppp2r5cQ60996 524 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Chsy1Q6ZQ11 800 aa17.93■□□□□ 0.46
Ctcf-201ENSMUST00000005841 Ddhd1Q80YA3 547 aa17.93■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 11.3 ms