RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Tnfrsf18O35714 228 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Rps6P62754 249 aaKnown RBP20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Tarbp2P97473 365 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Agbl1Q09M05 972 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Zdhhc18Q5Y5T2 380 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Nlrp14Q6B966 993 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 C2cd2lQ80X80 706 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Tor4aQ8BH02 426 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Ipo5Q8BKC5 1097 aaKnown RBP20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Usp37Q8C0R0 979 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Rell1Q8K2J7 272 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Tom1l1Q923U0 474 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Nop56Q9D6Z1 580 aaKnown RBP20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Wdr83Q9DAJ4 315 aaKnown RBP20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Klf15Q9EPW2 415 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Gm28360A0A087WR25 190 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Rrm1P07742 792 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Phka1P18826 1241 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Wnt7bP28047 349 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 UrosP51163 265 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Spink5Q148R4 1017 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Spdye4aQ5IBH6 268 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Cyp3a11Q64459 504 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Zcwpw1Q6IR42 630 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Nsun6Q7TS68 476 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Wnk4Q80UE6 1222 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Elmo3Q8BYZ7 720 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Myef2Q8C854 591 aaKnown RBP20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Zmynd10Q99ML0 440 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Satl1Q9D5N8 744 aa20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Rfwd2Q9R1A8 733 aaKnown RBP20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Myh9Q8VDD5 1960 aaKnown RBP20■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Cep85lA0A1W2P884 806 aa19.99■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Srsf11E9Q6E5 511 aaKnown RBP19.99■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Creb1Q01147 341 aaKnown RBP19.99■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Prom2Q3UUY6 835 aa19.99■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Gm2163Q6PCY5 473 aa19.99■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Cpa5Q8R4H4 436 aa19.99■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Tlr3Q99MB1 905 aa19.99■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Orc3Q9JK30 715 aaKnown RBP19.99■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Spata31d1aE9QA35 1336 aa19.99■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Taf4bG5E8Z2 855 aa19.99■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Cyp2b9P12790 491 aa19.99■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Bmp2P21274 394 aa19.99■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Rab21P35282 222 aa19.99■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Rhox5P52651 210 aa19.99■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Fam193bQ3U2K0 892 aa19.99■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Tfcp2l1Q3UNW5 479 aa19.99■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Drc1Q3USS3 753 aa19.99■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 CactinQ9CS00 772 aaKnown RBP19.99■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 PrameQ9D4Z5 464 aa19.99■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Ccdc182Q9D9C6 152 aa19.99■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Taf1Q80UV9 1891 aa19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Nup62clA2AG10 272 aa19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Art2aP17981 287 aa19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Serpina1eQ00898 413 aa19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 NfiaQ02780 532 aa19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Rmdn3Q3UJU9 470 aa19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Lgr6Q3UVD5 967 aa19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Fam92bQ3V2J0 292 aa19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Tfap2bQ61313 459 aa19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Pgrmc2Q80UU9 217 aaKnown RBP19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Ints9Q8K114 658 aaKnown RBP19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Lrrc14Q8VC16 493 aa19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Ankef1Q9D2J7 775 aa19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Map3k20Q9ESL4 802 aaKnown RBP19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Mical3Q8CJ19 1993 aa19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Eddm13E9Q7F5 164 aa19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Vmn2r15L7N2A0 855 aa19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Aff1O88573 1216 aa19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Tmem120bQ3TA38 339 aa19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Sec14l2Q99J08 403 aa19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Rab11fip1Q9D620 645 aa19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Prmt2Q9R144 448 aa19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Ggt5Q9Z2A9 573 aa19.98■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Ccdc152E9PX14 254 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Zfp457L7N1X4 647 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Nptx2O70340 429 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Marcksl1P28667 200 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Zswim5Q80TC6 1188 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Abcf3Q8K268 709 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Rassf3Q99P51 232 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Snf8Q9CZ28 258 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Usp35M0QWN7 1009 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 CaluO35887 315 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Diaph2O70566 1098 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 SpoplQ2M2N2 392 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 B4galnt4Q766D5 1034 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Hectd2Q8CDU6 774 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Btbd6Q8K2J9 488 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Znf445Q8R2V3 986 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Scrn2Q8VCA8 425 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Themis2Q91YX0 663 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 SncbQ91ZZ3 133 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Q99KU6 348 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Sucla2Q9Z2I9 463 aa19.97■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Spata31d1dE9Q5W2 1247 aa19.96■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Gcnt4E9Q649 455 aa19.96■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Serpinb6eI7HJI3 429 aa19.96■□□□□ 0.79
Shkbp1-201ENSMUST00000003857 Atf2P16951 487 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms