RNA–Protein interactions for RNA: tY(GUA)J2

SUP4, Transcript of Tyrosine tRNA (tRNA-Tyr), predicted by tRNAscan-SE analysis, yeast

Gene SUP4, Length 75 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP4	tY(GUA)J2	YVH1	Q02256	364 aa	Known RBP	5.27	□□□□□ -1.57
SUP4	tY(GUA)J2	YPR117W	Q06116	2489 aa		5.27	□□□□□ -1.57
SUP4	tY(GUA)J2	ANT1	Q06497	328 aa		5.27	□□□□□ -1.57
SUP4	tY(GUA)J2	NOC4	Q06512	552 aa	Predicted RBP	5.27	□□□□□ -1.57
SUP4	tY(GUA)J2	YPR147C	Q06522	304 aa	Known RBP	5.27	□□□□□ -1.57
SUP4	tY(GUA)J2	MIM1	Q08176	113 aa		5.27	□□□□□ -1.57
SUP4	tY(GUA)J2	REP2	P03872	296 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	SSA3	P09435	649 aa	Known RBP	5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	CDC26	P14724	124 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	HNM1	P19807	563 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	CPR4	P25334	318 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	YCR006C	P25350	157 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	NFS1	P25374	497 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	EHD3	P28817	500 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	PPZ2	P33329	710 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	FRM2	P37261	193 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	UMP1	P38293	148 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	OSH7	P38755	437 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	SSO2	P39926	295 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	SLZ1	P40167	298 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	TAD2	P47058	250 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	HAM1	P47119	197 aa	Known RBP	5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	TYW3	P53177	273 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	AAH1	P53909	347 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	SMX3	P54999	86 aa	Predicted RBP	5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	YML018C	Q03730	393 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	HEM25	Q07534	307 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	YLR108C	Q12259	485 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	RRI1	Q12468	440 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	YHR213W-A	Q8TGT4	77 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	PET20	Q99373	253 aa		5.26	□□□□□ -1.57
SUP4	tY(GUA)J2	YLR358C	O13565	187 aa		5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	RPP2B	P02400	110 aa	Known RBP	5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	SCEI	P03882	235 aa		5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	SGA1	P08019	549 aa		5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	NAM2	P11325	894 aa		5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	SPO7	P18410	259 aa		5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	RFA3	P26755	122 aa	Known RBP	5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	SRB6	P32570	121 aa		5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	YBL010C	P32788	280 aa		5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	YKR073C	P36153	106 aa		5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	FLO10	P36170	1169 aa		5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	YPC1	P38298	316 aa		5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	LSM12	P38828	187 aa	Known RBP	5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	GCV3	P39726	170 aa	Predicted RBP	5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	GLR1	P41921	483 aa	Known RBP	5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	SRB7	P47822	140 aa		5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	HSV2	P50079	448 aa	Predicted RBP	5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	OKP1	P53298	406 aa		5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	PDR16	P53860	351 aa	Known RBP	5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	SPR28	Q04921	423 aa		5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	CTS2	Q06350	511 aa		5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	RDL2	Q08742	149 aa	Known RBP	5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	YPL272C	Q08984	517 aa		5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	TGS1	Q12052	315 aa		5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	YRA1	Q12159	226 aa	Known RBP	5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	YRM1	Q12340	786 aa		5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	HMS1	Q12398	434 aa		5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	EAF3	Q12432	401 aa		5.25	□□□□□ -1.57
SUP4	tY(GUA)J2	BEM2	P39960	2167 aa	Known RBP	5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	YAL064W-B	O13512	126 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	SCO1	P23833	295 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	CPR3	P25719	182 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	VMA5	P31412	392 aa	Known RBP	5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	FMT1	P32785	401 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	SRY1	P36007	326 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	CBT1	P36038	271 aa	Predicted RBP	5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	APD1	P38281	316 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	SOL3	P38858	249 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	ASP1	P38986	381 aa	Predicted RBP	5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	YER010C	P40011	234 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	NIT2	P47016	307 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	ASK10	P48361	1146 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	ACS2	P52910	683 aa	Known RBP	5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	NIF3	P53081	288 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	YGR126W	P53274	230 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	YPL039W	Q03080	316 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	YDR248C	Q03786	193 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	CAB5	Q03941	241 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	AGE1	Q04412	482 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	VBA4	Q04602	768 aa	Known RBP	5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	MCH4	Q08268	501 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	SCP1	Q08873	200 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	NIP7	Q08962	181 aa	Known RBP	5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	FCF2	Q12035	217 aa	Predicted RBP	5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	ATP16	Q12165	160 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	MCT1	Q12283	360 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	TFC7	Q12415	435 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	YJR112W-A	Q3E743	109 aa		5.24	□□□□□ -1.57
SUP4	tY(GUA)J2	SEC22	P22214	214 aa		5.23	□□□□□ -1.57
SUP4	tY(GUA)J2	IFM1	P25038	676 aa		5.23	□□□□□ -1.57
SUP4	tY(GUA)J2	TIP1	P27654	210 aa	Predicted RBP	5.23	□□□□□ -1.57
SUP4	tY(GUA)J2	ERG3	P32353	365 aa		5.23	□□□□□ -1.57
SUP4	tY(GUA)J2	MCM10	P32354	571 aa		5.23	□□□□□ -1.57
SUP4	tY(GUA)J2	MRT4	P33201	236 aa	Known RBP	5.23	□□□□□ -1.57
SUP4	tY(GUA)J2	POP8	P38208	133 aa		5.23	□□□□□ -1.57
SUP4	tY(GUA)J2	LAG1	P38703	411 aa		5.23	□□□□□ -1.57
SUP4	tY(GUA)J2	GRE3	P38715	327 aa	Known RBP RIP-Chip data	5.23	□□□□□ -1.57	not detected
SUP4	tY(GUA)J2	YHR210C	P38893	341 aa		5.23	□□□□□ -1.57
SUP4	tY(GUA)J2	YIR035C	P40579	254 aa		5.23	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms