RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EAR1	YMR171C	YDR034W-B	Q6Q5X2	51 aa		4.13	□□□□□ -1.75
EAR1	YMR171C	FSH3	Q99369	266 aa		4.13	□□□□□ -1.75
EAR1	YMR171C	MSB2	P32334	1306 aa		4.12	□□□□□ -1.75
EAR1	YMR171C	IPP1	P00817	287 aa	Known RBP	4.12	□□□□□ -1.75
EAR1	YMR171C	KIN28	P06242	306 aa		4.12	□□□□□ -1.75
EAR1	YMR171C	ARG80	P07249	177 aa		4.12	□□□□□ -1.75
EAR1	YMR171C	BAR1	P12630	587 aa		4.12	□□□□□ -1.75
EAR1	YMR171C	CBS1	P14066	229 aa		4.12	□□□□□ -1.75
EAR1	YMR171C	CKS1	P20486	150 aa	Known RBP	4.12	□□□□□ -1.75
EAR1	YMR171C	PAU2	P32612	120 aa		4.12	□□□□□ -1.75
EAR1	YMR171C	PDC2	P32896	925 aa		4.12	□□□□□ -1.75
EAR1	YMR171C	CBT1	P36038	271 aa	Predicted RBP	4.12	□□□□□ -1.75
EAR1	YMR171C	TRM7	P38238	310 aa	Known RBP	4.12	□□□□□ -1.75
EAR1	YMR171C	TAE1	P38340	232 aa		4.12	□□□□□ -1.75
EAR1	YMR171C	FET3	P38993	636 aa		4.12	□□□□□ -1.75
EAR1	YMR171C	MET30	P39014	640 aa		4.12	□□□□□ -1.75
EAR1	YMR171C	YER184C	P39961	794 aa		4.12	□□□□□ -1.75
EAR1	YMR171C	YIL024C	P40543	189 aa		4.12	□□□□□ -1.75
EAR1	YMR171C	UBP8	P50102	471 aa		4.12	□□□□□ -1.75
EAR1	YMR171C	DOC1	P53068	250 aa		4.12	□□□□□ -1.75
EAR1	YMR171C	YGR250C	P53316	781 aa	Known RBP	4.12	□□□□□ -1.75
EAR1	YMR171C	SAY1	P53324	424 aa		4.12	□□□□□ -1.75
EAR1	YMR171C	GIM3	P53900	129 aa		4.12	□□□□□ -1.75
EAR1	YMR171C	RPC11	Q04307	110 aa	Predicted RBP	4.12	□□□□□ -1.75
EAR1	YMR171C	EMI2	Q04409	500 aa	Known RBP	4.12	□□□□□ -1.75
EAR1	YMR171C	YOR289W	Q12012	251 aa	Predicted RBP	4.12	□□□□□ -1.75
EAR1	YMR171C	INH1	P01097	85 aa		4.11	□□□□□ -1.75
EAR1	YMR171C	REP2	P03872	296 aa		4.11	□□□□□ -1.75
EAR1	YMR171C	COX9	P07255	59 aa		4.11	□□□□□ -1.75
EAR1	YMR171C	ERD1	P16151	362 aa		4.11	□□□□□ -1.75
EAR1	YMR171C	FUS3	P16892	353 aa	Known RBP	4.11	□□□□□ -1.75
EAR1	YMR171C	MDM10	P18409	493 aa		4.11	□□□□□ -1.75
EAR1	YMR171C	YCP4	P25349	247 aa	Known RBP	4.11	□□□□□ -1.75
EAR1	YMR171C	ADH7	P25377	361 aa		4.11	□□□□□ -1.75
EAR1	YMR171C	MRP17	P28778	131 aa		4.11	□□□□□ -1.75
EAR1	YMR171C	SRB6	P32570	121 aa		4.11	□□□□□ -1.75
EAR1	YMR171C	ECM15	P35195	104 aa		4.11	□□□□□ -1.75
EAR1	YMR171C	NSG1	P38837	291 aa		4.11	□□□□□ -1.75
EAR1	YMR171C	LTP1	P40347	161 aa		4.11	□□□□□ -1.75
EAR1	YMR171C	ICE2	P40499	491 aa		4.11	□□□□□ -1.75
EAR1	YMR171C	CFD1	P40558	293 aa		4.11	□□□□□ -1.75
EAR1	YMR171C	CAT5	P41735	233 aa		4.11	□□□□□ -1.75
EAR1	YMR171C	PAM16	P42949	149 aa		4.11	□□□□□ -1.75
EAR1	YMR171C	GLO1	P50107	326 aa		4.11	□□□□□ -1.75
EAR1	YMR171C	HOS2	P53096	452 aa	Predicted RBP	4.11	□□□□□ -1.75
EAR1	YMR171C	ERG26	P53199	349 aa	Known RBP	4.11	□□□□□ -1.75
EAR1	YMR171C	ASI3	P53983	676 aa		4.11	□□□□□ -1.75
EAR1	YMR171C	UTP15	Q04305	513 aa	Known RBP	4.11	□□□□□ -1.75
EAR1	YMR171C	SEC13	Q04491	297 aa	Known RBP	4.11	□□□□□ -1.75
EAR1	YMR171C	YMR252C	Q04814	134 aa		4.11	□□□□□ -1.75
EAR1	YMR171C	PEX30	Q06169	523 aa		4.11	□□□□□ -1.75
EAR1	YMR171C	ATG10	Q07879	167 aa		4.11	□□□□□ -1.75
EAR1	YMR171C	FMP40	Q08968	688 aa	Predicted RBP	4.11	□□□□□ -1.75
EAR1	YMR171C	SNU23	Q12368	194 aa	Predicted RBP	4.11	□□□□□ -1.75
EAR1	YMR171C	HOM3	P10869	527 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	CNB1	P25296	175 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	BOS1	P25385	244 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	PUT3	P25502	979 aa	Predicted RBP	4.1	□□□□□ -1.75
EAR1	YMR171C	ATS1	P31386	333 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	ERG1	P32476	496 aa	Known RBP	4.1	□□□□□ -1.75
EAR1	YMR171C	CDC13	P32797	924 aa	Known RBP	4.1	□□□□□ -1.75
EAR1	YMR171C	RPS0A	P32905	252 aa	Known RBP	4.1	□□□□□ -1.75
EAR1	YMR171C	SFC1	P33303	322 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	SFK1	P35735	353 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	DED81	P38707	554 aa	Known RBP	4.1	□□□□□ -1.75
EAR1	YMR171C	FLO5	P38894	1075 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	ELO1	P39540	310 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	PHB2	P50085	310 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	CDH1	P53197	566 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	CAF40	P53829	373 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	CTL1	Q03220	320 aa	Known RBP	4.1	□□□□□ -1.75
EAR1	YMR171C	UTP21	Q06078	939 aa	Predicted RBP	4.1	□□□□□ -1.75
EAR1	YMR171C	KEI1	Q06346	221 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	YLR108C	Q12259	485 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	HIP1	P06775	603 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	ADK1	P07170	222 aa	Known RBP	4.1	□□□□□ -1.75
EAR1	YMR171C	PRP2	P20095	876 aa	Predicted RBP	4.1	□□□□□ -1.75
EAR1	YMR171C	FUN19	P28003	413 aa	Predicted RBP	4.1	□□□□□ -1.75
EAR1	YMR171C	YEF1	P32622	495 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	YOR062C	P36025	268 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	ECM34	P38728	170 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	PHO90	P39535	881 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	SSO2	P39926	295 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	BMT5	P40493	336 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	SFH5	P47008	294 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	TOS2	P50078	622 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	SNT309	Q06091	175 aa	Predicted RBP	4.1	□□□□□ -1.75
EAR1	YMR171C	LUC7	Q07508	261 aa	Predicted RBP	4.1	□□□□□ -1.75
EAR1	YMR171C	YDL211C	Q12121	372 aa		4.1	□□□□□ -1.75
EAR1	YMR171C	PDH1	Q12428	516 aa	Known RBP	4.1	□□□□□ -1.75
EAR1	YMR171C	DET1	Q99288	334 aa	Known RBP	4.1	□□□□□ -1.75
EAR1	YMR171C	SPT15	P13393	240 aa	Known RBP	4.09	□□□□□ -1.76
EAR1	YMR171C	YCR100C	P25606	316 aa		4.09	□□□□□ -1.76
EAR1	YMR171C	SMB1	P40018	196 aa	Known RBP	4.09	□□□□□ -1.76
EAR1	YMR171C	OSW5	P40219	148 aa		4.09	□□□□□ -1.76
EAR1	YMR171C	MOB1	P40484	314 aa		4.09	□□□□□ -1.76
EAR1	YMR171C	UTP25	P40498	721 aa	Known RBP	4.09	□□□□□ -1.76
EAR1	YMR171C	GLR1	P41921	483 aa	Known RBP	4.09	□□□□□ -1.76
EAR1	YMR171C	VHT1	P53241	593 aa		4.09	□□□□□ -1.76
EAR1	YMR171C	CAC2	Q04199	468 aa		4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 79.7 ms