RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C TRM10Q12400 293 aa2.12□□□□□ -2.07
NYV1YLR093C RPS19AP07280 144 aaKnown RBP2.11□□□□□ -2.07
NYV1YLR093C RPS19BP07281 144 aaPredicted RBP2.11□□□□□ -2.07
NYV1YLR093C YBR121C-AP0C5L4 52 aa2.11□□□□□ -2.07
NYV1YLR093C FUS3P16892 353 aaKnown RBP2.11□□□□□ -2.07
NYV1YLR093C YPK2P18961 677 aa2.11□□□□□ -2.07
NYV1YLR093C PRP18P33411 251 aaPredicted RBP2.11□□□□□ -2.07
NYV1YLR093C MRPL3P36516 390 aa2.11□□□□□ -2.07
NYV1YLR093C MED8P38304 223 aa2.11□□□□□ -2.07
NYV1YLR093C GOS1P38736 223 aa2.11□□□□□ -2.07
NYV1YLR093C YFL064CP43540 174 aa2.11□□□□□ -2.07
NYV1YLR093C CWC23P52868 283 aaPredicted RBP2.11□□□□□ -2.07
NYV1YLR093C LIF1P53150 421 aa2.11□□□□□ -2.07
NYV1YLR093C FMP48P53233 369 aa2.11□□□□□ -2.07
NYV1YLR093C ACT1P60010 375 aaKnown RBP2.11□□□□□ -2.07
NYV1YLR093C API2Q04413 109 aa2.11□□□□□ -2.07
NYV1YLR093C COQ10Q08058 207 aa2.11□□□□□ -2.07
NYV1YLR093C SRO7Q12038 1033 aa2.11□□□□□ -2.07
NYV1YLR093C YPL119C-AQ3E751 87 aa2.11□□□□□ -2.07
NYV1YLR093C YAL063C-AQ3E791 96 aa2.11□□□□□ -2.07
NYV1YLR093C YDR157WA0A023PZE8 133 aa2.1□□□□□ -2.07
NYV1YLR093C RPL4AP10664 362 aaKnown RBP2.1□□□□□ -2.07
NYV1YLR093C POX1P13711 748 aa2.1□□□□□ -2.07
NYV1YLR093C STE18P18852 110 aa2.1□□□□□ -2.07
NYV1YLR093C APA2P22108 325 aa2.1□□□□□ -2.07
NYV1YLR093C NTF2P33331 125 aaKnown RBP2.1□□□□□ -2.07
NYV1YLR093C TAF14P35189 244 aa2.1□□□□□ -2.07
NYV1YLR093C CBT1P36038 271 aaPredicted RBP2.1□□□□□ -2.07
NYV1YLR093C SMP1P38128 452 aa2.1□□□□□ -2.07
NYV1YLR093C YHL049CP38722 271 aa2.1□□□□□ -2.07
NYV1YLR093C YNL194CP40169 301 aa2.1□□□□□ -2.07
NYV1YLR093C YRB2P40517 327 aa2.1□□□□□ -2.07
NYV1YLR093C RPL4BP49626 362 aaKnown RBP2.1□□□□□ -2.07
NYV1YLR093C FMP41P53889 259 aaKnown RBP2.1□□□□□ -2.07
NYV1YLR093C YPL113CQ02961 396 aa2.1□□□□□ -2.07
NYV1YLR093C INP1Q03694 420 aa2.1□□□□□ -2.07
NYV1YLR093C YMR114CQ04471 368 aaKnown RBP2.1□□□□□ -2.07
NYV1YLR093C CDC123Q05791 360 aa2.1□□□□□ -2.07
NYV1YLR093C YPL278CQ08990 100 aa2.1□□□□□ -2.07
NYV1YLR093C YOL085CQ99345 113 aa2.1□□□□□ -2.07
NYV1YLR093C COS2P0CX12 379 aa2.09□□□□□ -2.07
NYV1YLR093C COS3P0CX13 379 aa2.09□□□□□ -2.07
NYV1YLR093C SPS19P32573 292 aaKnown RBP2.09□□□□□ -2.07
NYV1YLR093C AGA2P32781 87 aa2.09□□□□□ -2.07
NYV1YLR093C PRX1P34227 261 aaKnown RBP2.09□□□□□ -2.07
NYV1YLR093C SEN34P39707 275 aa2.09□□□□□ -2.07
NYV1YLR093C YER034WP40022 185 aaKnown RBP2.09□□□□□ -2.07
NYV1YLR093C COX15P40086 486 aa2.09□□□□□ -2.07
NYV1YLR093C PRE6P40303 254 aaKnown RBP2.09□□□□□ -2.07
NYV1YLR093C RFC4P40339 323 aaKnown RBP2.09□□□□□ -2.07
NYV1YLR093C COS4P43542 379 aa2.09□□□□□ -2.07
NYV1YLR093C MIC26P50087 233 aa2.09□□□□□ -2.07
NYV1YLR093C MGA1P53050 456 aa2.09□□□□□ -2.07
NYV1YLR093C COG7P53195 279 aa2.09□□□□□ -2.07
NYV1YLR093C YMR244WQ04018 355 aa2.09□□□□□ -2.07
NYV1YLR093C UTP15Q04305 513 aaKnown RBP2.09□□□□□ -2.07
NYV1YLR093C ECM19Q06011 112 aa2.09□□□□□ -2.07
NYV1YLR093C YPR098CQ06089 161 aa2.09□□□□□ -2.07
NYV1YLR093C ATG17Q06410 417 aa2.09□□□□□ -2.07
NYV1YLR093C PLB3Q08108 686 aa2.09□□□□□ -2.07
NYV1YLR093C TIR4Q12218 487 aaPredicted RBP2.09□□□□□ -2.07
NYV1YLR093C DFM1Q12743 341 aaKnown RBP2.09□□□□□ -2.07
NYV1YLR093C YCL012CQ8J0M4 134 aa2.09□□□□□ -2.07
NYV1YLR093C YMR316C-AI2HB70 103 aa2.08□□□□□ -2.08
NYV1YLR093C SPT3P06844 337 aa2.08□□□□□ -2.08
NYV1YLR093C BCY1P07278 416 aaKnown RBP2.08□□□□□ -2.08
NYV1YLR093C DPB2P24482 689 aaPredicted RBP2.08□□□□□ -2.08
NYV1YLR093C RAD51P25454 400 aa2.08□□□□□ -2.08
NYV1YLR093C RPB9P27999 122 aa2.08□□□□□ -2.08
NYV1YLR093C CAM1P29547 415 aaKnown RBP2.08□□□□□ -2.08
NYV1YLR093C ZRT3P34240 503 aa2.08□□□□□ -2.08
NYV1YLR093C HMT1P38074 348 aa2.08□□□□□ -2.08
NYV1YLR093C HEK2P38199 381 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
NYV1YLR093C POP8P38208 133 aa2.08□□□□□ -2.08
NYV1YLR093C FZO1P38297 855 aa2.08□□□□□ -2.08
NYV1YLR093C CUE1P38428 203 aa2.08□□□□□ -2.08
NYV1YLR093C KRE29P40026 464 aa2.08□□□□□ -2.08
NYV1YLR093C RRT13P40042 185 aa2.08□□□□□ -2.08
NYV1YLR093C SNZ3P43545 298 aa2.08□□□□□ -2.08
NYV1YLR093C MIC19P43594 170 aa2.08□□□□□ -2.08
NYV1YLR093C YJR149WP47177 404 aa2.08□□□□□ -2.08
NYV1YLR093C PRP24P49960 444 aaKnown RBP2.08□□□□□ -2.08
NYV1YLR093C NIF3P53081 288 aa2.08□□□□□ -2.08
NYV1YLR093C MRS2Q01926 470 aa2.08□□□□□ -2.08
NYV1YLR093C YMR226CQ05016 267 aaKnown RBP2.08□□□□□ -2.08
NYV1YLR093C DXO1Q06349 442 aa2.08□□□□□ -2.08
NYV1YLR093C YDL144CQ07589 356 aa2.08□□□□□ -2.08
NYV1YLR093C SNU23Q12368 194 aaPredicted RBP2.08□□□□□ -2.08
NYV1YLR093C DCN1Q12395 269 aa2.08□□□□□ -2.08
NYV1YLR093C YKR104WP0CE69 306 aa2.07□□□□□ -2.08
NYV1YLR093C MATALPHA2P0CY08 210 aa2.07□□□□□ -2.08
NYV1YLR093C HMLALPHA2P0CY09 210 aa2.07□□□□□ -2.08
NYV1YLR093C SNA3P14359 133 aa2.07□□□□□ -2.08
NYV1YLR093C EPT1P22140 391 aa2.07□□□□□ -2.08
NYV1YLR093C CDC10P25342 322 aaKnown RBP2.07□□□□□ -2.08
NYV1YLR093C ADE1P27616 306 aa2.07□□□□□ -2.08
NYV1YLR093C IMP1P28627 190 aa2.07□□□□□ -2.08
NYV1YLR093C CAT2P32796 670 aaKnown RBP2.07□□□□□ -2.08
NYV1YLR093C CAB3P36076 571 aa2.07□□□□□ -2.08
NYV1YLR093C YIL012WP40551 113 aa2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 64.2 ms