RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C YPR196WQ06595 470 aa8.76□□□□□ -1.01
SHB17YKR043C FRE3Q08905 711 aa8.76□□□□□ -1.01
SHB17YKR043C LYS21Q12122 440 aaKnown RBP8.76□□□□□ -1.01
SHB17YKR043C RPL6BP05739 176 aaKnown RBP8.75□□□□□ -1.01
SHB17YKR043C RPS5P26783 225 aaKnown RBP8.75□□□□□ -1.01
SHB17YKR043C ARO7P32178 256 aa8.75□□□□□ -1.01
SHB17YKR043C DOA4P32571 926 aa8.75□□□□□ -1.01
SHB17YKR043C MCH2P36032 473 aa8.75□□□□□ -1.01
SHB17YKR043C SRL3P36167 246 aa8.75□□□□□ -1.01
SHB17YKR043C LSM4P40070 187 aaKnown RBP8.75□□□□□ -1.01
SHB17YKR043C DDI1P40087 428 aa8.75□□□□□ -1.01
SHB17YKR043C DLS1P40366 167 aa8.75□□□□□ -1.01
SHB17YKR043C YIL012WP40551 113 aa8.75□□□□□ -1.01
SHB17YKR043C YGL204CP53089 101 aa8.75□□□□□ -1.01
SHB17YKR043C SCW11P53189 542 aa8.75□□□□□ -1.01
SHB17YKR043C MTL1P53214 551 aa8.75□□□□□ -1.01
SHB17YKR043C YGR054WP53235 642 aaKnown RBP8.75□□□□□ -1.01
SHB17YKR043C SLI1P53304 468 aa8.75□□□□□ -1.01
SHB17YKR043C YNR048WP53740 393 aa8.75□□□□□ -1.01
SHB17YKR043C NRK1P53915 240 aa8.75□□□□□ -1.01
SHB17YKR043C TGS1Q12052 315 aa8.75□□□□□ -1.01
SHB17YKR043C ARO3P14843 370 aaKnown RBP8.74□□□□□ -1.01
SHB17YKR043C AHC2P25649 128 aa8.74□□□□□ -1.01
SHB17YKR043C DEG1P31115 442 aaKnown RBP8.74□□□□□ -1.01
SHB17YKR043C MNS1P32906 549 aa8.74□□□□□ -1.01
SHB17YKR043C RIB7P33312 244 aa8.74□□□□□ -1.01
SHB17YKR043C MTH1P35198 433 aa8.74□□□□□ -1.01
SHB17YKR043C SHM2P37291 469 aaKnown RBP8.74□□□□□ -1.01
SHB17YKR043C ARO9P38840 513 aaPredicted RBP8.74□□□□□ -1.01
SHB17YKR043C EGT2P42835 1041 aa8.74□□□□□ -1.01
SHB17YKR043C CIN2P46670 268 aa8.74□□□□□ -1.01
SHB17YKR043C TYW3P53177 273 aa8.74□□□□□ -1.01
SHB17YKR043C TEX1P53851 422 aaKnown RBP8.74□□□□□ -1.01
SHB17YKR043C CIK1Q01649 594 aa8.74□□□□□ -1.01
SHB17YKR043C GPI17Q04080 534 aa8.74□□□□□ -1.01
SHB17YKR043C FMP42Q04991 504 aa8.74□□□□□ -1.01
SHB17YKR043C NMA1Q06178 401 aaKnown RBP8.74□□□□□ -1.01
SHB17YKR043C YLR099W-AQ3E798 87 aa8.74□□□□□ -1.01
SHB17YKR043C YEL009C-AA0A023PZF2 135 aa8.73□□□□□ -1.01
SHB17YKR043C RPL30P14120 105 aaKnown RBP8.73□□□□□ -1.01
SHB17YKR043C MKS1P34072 584 aa8.73□□□□□ -1.01
SHB17YKR043C FAT1P38225 669 aa8.73□□□□□ -1.01
SHB17YKR043C YAE1P47118 141 aaPredicted RBP8.73□□□□□ -1.01
SHB17YKR043C YJR120WP47157 116 aa8.73□□□□□ -1.01
SHB17YKR043C PHB2P50085 310 aa8.73□□□□□ -1.01
SHB17YKR043C RPA14P50106 137 aa8.73□□□□□ -1.01
SHB17YKR043C PMT5P52867 743 aa8.73□□□□□ -1.01
SHB17YKR043C YIP4P53093 235 aa8.73□□□□□ -1.01
SHB17YKR043C MSS11Q03825 758 aa8.73□□□□□ -1.01
SHB17YKR043C USB1Q12208 290 aaKnown RBP8.73□□□□□ -1.01
SHB17YKR043C SIR2P06700 562 aa8.72□□□□□ -1.01
SHB17YKR043C ADK1P07170 222 aaKnown RBP8.72□□□□□ -1.01
SHB17YKR043C MSI1P13712 422 aa8.72□□□□□ -1.01
SHB17YKR043C AFG1P32317 509 aa8.72□□□□□ -1.01
SHB17YKR043C PAU2P32612 120 aa8.72□□□□□ -1.01
SHB17YKR043C REC114P32841 428 aa8.72□□□□□ -1.01
SHB17YKR043C ZRT3P34240 503 aa8.72□□□□□ -1.01
SHB17YKR043C ARC40P38328 384 aaKnown RBP8.72□□□□□ -1.01
SHB17YKR043C SSH1P38353 490 aaKnown RBP8.72□□□□□ -1.01
SHB17YKR043C PCL6P40038 420 aa8.72□□□□□ -1.01
SHB17YKR043C YER121WP40076 114 aa8.72□□□□□ -1.01
SHB17YKR043C ERJ5P43613 295 aaPredicted RBP8.72□□□□□ -1.01
SHB17YKR043C YGL159WP53110 370 aa8.72□□□□□ -1.01
SHB17YKR043C PEF1P53238 335 aa8.72□□□□□ -1.01
SHB17YKR043C YDC1Q02896 317 aa8.72□□□□□ -1.01
SHB17YKR043C DLT1Q04216 342 aa8.72□□□□□ -1.01
SHB17YKR043C ASR1Q06834 288 aa8.72□□□□□ -1.01
SHB17YKR043C SPO24Q3E752 67 aa8.72□□□□□ -1.01
SHB17YKR043C FSH3Q99369 266 aa8.72□□□□□ -1.01
SHB17YKR043C HNM1P19807 563 aa8.71□□□□□ -1.02
SHB17YKR043C DBP2P24783 546 aaKnown RBP8.71□□□□□ -1.02
SHB17YKR043C YCK3P39962 524 aa8.71□□□□□ -1.02
SHB17YKR043C YJL218WP40892 196 aaKnown RBP8.71□□□□□ -1.02
SHB17YKR043C SBH2P52871 88 aa8.71□□□□□ -1.02
SHB17YKR043C YNL046WP53956 172 aa8.71□□□□□ -1.02
SHB17YKR043C GRX3Q03835 250 aa8.71□□□□□ -1.02
SHB17YKR043C YPR098CQ06089 161 aa8.71□□□□□ -1.02
SHB17YKR043C HEM25Q07534 307 aa8.71□□□□□ -1.02
SHB17YKR043C RFU1Q08003 200 aa8.71□□□□□ -1.02
SHB17YKR043C YOR097CQ12274 175 aaPredicted RBP8.71□□□□□ -1.02
SHB17YKR043C QCR7P00128 127 aa8.7□□□□□ -1.02
SHB17YKR043C CDC31P06704 161 aaKnown RBP8.7□□□□□ -1.02
SHB17YKR043C PHO4P07270 312 aaKnown RBP8.7□□□□□ -1.02
SHB17YKR043C SGA1P08019 549 aa8.7□□□□□ -1.02
SHB17YKR043C YML003WP0CF16 290 aa8.7□□□□□ -1.02
SHB17YKR043C MATALPHA1P0CY06 175 aa8.7□□□□□ -1.02
SHB17YKR043C HMLALPHA1P0CY07 175 aa8.7□□□□□ -1.02
SHB17YKR043C PPZ2P33329 710 aa8.7□□□□□ -1.02
SHB17YKR043C SFK1P35735 353 aa8.7□□□□□ -1.02
SHB17YKR043C TCM62P38228 572 aaKnown RBP8.7□□□□□ -1.02
SHB17YKR043C GLR1P41921 483 aaKnown RBP8.7□□□□□ -1.02
SHB17YKR043C PEX30Q06169 523 aa8.7□□□□□ -1.02
SHB17YKR043C SSK1Q07084 712 aa8.7□□□□□ -1.02
SHB17YKR043C SNA4Q07549 140 aa8.7□□□□□ -1.02
SHB17YKR043C ORT1Q12375 292 aa8.7□□□□□ -1.02
SHB17YKR043C SAG1P20840 650 aa8.69□□□□□ -1.02
SHB17YKR043C RPL24BP24000 155 aaKnown RBP8.69□□□□□ -1.02
SHB17YKR043C ERG24P32462 438 aaKnown RBP8.69□□□□□ -1.02
SHB17YKR043C RCN1P36054 211 aa8.69□□□□□ -1.02
SHB17YKR043C POP6P53218 158 aa8.69□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms