RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W BLI1P35727 113 aa3.48□□□□□ -1.85
SPT3YDR392W YBR242WP38331 238 aa3.48□□□□□ -1.85
SPT3YDR392W EFM4P40516 257 aa3.48□□□□□ -1.85
SPT3YDR392W HAM1P47119 197 aaKnown RBP3.48□□□□□ -1.85
SPT3YDR392W IMD4P50094 524 aaKnown RBP3.48□□□□□ -1.85
SPT3YDR392W CWC25P53854 179 aaKnown RBP3.48□□□□□ -1.85
SPT3YDR392W YMR254CQ04838 102 aa3.48□□□□□ -1.85
SPT3YDR392W SSQ1Q05931 657 aaPredicted RBP3.48□□□□□ -1.85
SPT3YDR392W MCH4Q08268 501 aa3.48□□□□□ -1.85
SPT3YDR392W SCM3Q12334 223 aa3.48□□□□□ -1.85
SPT3YDR392W HTZ1Q12692 134 aaKnown RBP3.48□□□□□ -1.85
SPT3YDR392W PET494P07390 489 aaPredicted RBP3.47□□□□□ -1.85
SPT3YDR392W GRX2P17695 143 aaKnown RBP3.47□□□□□ -1.85
SPT3YDR392W RIB1P38066 345 aa3.47□□□□□ -1.85
SPT3YDR392W FMP33P46998 180 aa3.47□□□□□ -1.85
SPT3YDR392W RMR1P53060 241 aa3.47□□□□□ -1.85
SPT3YDR392W IZH1Q03419 316 aa3.47□□□□□ -1.85
SPT3YDR392W YDR278CQ05612 105 aa3.47□□□□□ -1.85
SPT3YDR392W HOR7Q05827 59 aa3.47□□□□□ -1.85
SPT3YDR392W ARR2Q06597 130 aa3.47□□□□□ -1.85
SPT3YDR392W RDS3Q06835 107 aaPredicted RBP3.47□□□□□ -1.85
SPT3YDR392W PRM3Q08931 133 aa3.47□□□□□ -1.85
SPT3YDR392W BBP1Q12365 385 aa3.47□□□□□ -1.85
SPT3YDR392W NCA2Q12374 616 aa3.47□□□□□ -1.85
SPT3YDR392W APC2Q12440 853 aa3.47□□□□□ -1.85
SPT3YDR392W YHR214C-EQ8TGK0 99 aa3.47□□□□□ -1.85
SPT3YDR392W HIS3P06633 220 aa3.46□□□□□ -1.86
SPT3YDR392W PEP4P07267 405 aaKnown RBP3.46□□□□□ -1.86
SPT3YDR392W NMT1P14743 455 aa3.46□□□□□ -1.86
SPT3YDR392W CLB3P24870 427 aa3.46□□□□□ -1.86
SPT3YDR392W BUD23P25627 275 aaPredicted RBP3.46□□□□□ -1.86
SPT3YDR392W YCR051WP25631 222 aa3.46□□□□□ -1.86
SPT3YDR392W LAC1P28496 418 aa3.46□□□□□ -1.86
SPT3YDR392W MCM10P32354 571 aa3.46□□□□□ -1.86
SPT3YDR392W SSO1P32867 290 aa3.46□□□□□ -1.86
SPT3YDR392W SPO23P33757 523 aa3.46□□□□□ -1.86
SPT3YDR392W NRG2P38082 220 aa3.46□□□□□ -1.86
SPT3YDR392W SNL1P40548 159 aa3.46□□□□□ -1.86
SPT3YDR392W GCD10P41814 478 aa3.46□□□□□ -1.86
SPT3YDR392W SWP82P43554 623 aa3.46□□□□□ -1.86
SPT3YDR392W URB2P47108 1174 aa3.46□□□□□ -1.86
SPT3YDR392W GET1P53192 235 aa3.46□□□□□ -1.86
SPT3YDR392W YGR021WP53212 290 aa3.46□□□□□ -1.86
SPT3YDR392W DBP6P53734 629 aaKnown RBP3.46□□□□□ -1.86
SPT3YDR392W SRL4Q03085 281 aa3.46□□□□□ -1.86
SPT3YDR392W SCS7Q03529 384 aa3.46□□□□□ -1.86
SPT3YDR392W YDR391CQ04170 232 aa3.46□□□□□ -1.86
SPT3YDR392W SYO1Q07395 620 aa3.46□□□□□ -1.86
SPT3YDR392W YPL199CQ08954 240 aa3.46□□□□□ -1.86
SPT3YDR392W CTR86P25355 563 aa3.45□□□□□ -1.86
SPT3YDR392W UTP11P34247 250 aaPredicted RBP3.45□□□□□ -1.86
SPT3YDR392W YHB1P39676 399 aaKnown RBP3.45□□□□□ -1.86
SPT3YDR392W FCY21P40039 528 aa3.45□□□□□ -1.86
SPT3YDR392W SRB7P47822 140 aa3.45□□□□□ -1.86
SPT3YDR392W COS10P52924 374 aa3.45□□□□□ -1.86
SPT3YDR392W CGR1P53188 120 aa3.45□□□□□ -1.86
SPT3YDR392W DML1Q03652 475 aa3.45□□□□□ -1.86
SPT3YDR392W ACL4Q03771 387 aa3.45□□□□□ -1.86
SPT3YDR392W UTP15Q04305 513 aaKnown RBP3.45□□□□□ -1.86
SPT3YDR392W COA4Q05809 96 aa3.45□□□□□ -1.86
SPT3YDR392W NNT1Q05874 261 aa3.45□□□□□ -1.86
SPT3YDR392W YEH2Q07950 538 aa3.45□□□□□ -1.86
SPT3YDR392W RRS1Q08746 203 aaKnown RBP3.45□□□□□ -1.86
SPT3YDR392W ADF1Q2V2Q1 113 aa3.45□□□□□ -1.86
SPT3YDR392W SCEIP03882 235 aa3.44□□□□□ -1.86
SPT3YDR392W PHO85P17157 305 aa3.44□□□□□ -1.86
SPT3YDR392W YCR100CP25606 316 aa3.44□□□□□ -1.86
SPT3YDR392W INO2P26798 304 aa3.44□□□□□ -1.86
SPT3YDR392W ACP1P32463 125 aa3.44□□□□□ -1.86
SPT3YDR392W YJL068CP40363 299 aa3.44□□□□□ -1.86
SPT3YDR392W MRM2P53123 320 aa3.44□□□□□ -1.86
SPT3YDR392W YDR387CQ04162 555 aa3.44□□□□□ -1.86
SPT3YDR392W NAT4Q04751 285 aa3.44□□□□□ -1.86
SPT3YDR392W YMR226CQ05016 267 aaKnown RBP3.44□□□□□ -1.86
SPT3YDR392W BCP1Q06338 283 aa3.44□□□□□ -1.86
SPT3YDR392W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
SPT3YDR392W ATP16Q12165 160 aa3.44□□□□□ -1.86
SPT3YDR392W RFM1Q12192 310 aa3.44□□□□□ -1.86
SPT3YDR392W SPT3P06844 337 aa3.43□□□□□ -1.86
SPT3YDR392W ARC19P33204 171 aaKnown RBP3.43□□□□□ -1.86
SPT3YDR392W AST1P35183 429 aa3.43□□□□□ -1.86
SPT3YDR392W YBR096WP38256 230 aa3.43□□□□□ -1.86
SPT3YDR392W SMX2P40204 77 aaKnown RBP3.43□□□□□ -1.86
SPT3YDR392W SLM1P40485 686 aa3.43□□□□□ -1.86
SPT3YDR392W DIM1P41819 318 aaKnown RBP3.43□□□□□ -1.86
SPT3YDR392W YNL320WP42840 284 aa3.43□□□□□ -1.86
SPT3YDR392W FAR7P43592 221 aa3.43□□□□□ -1.86
SPT3YDR392W YJL055WP47044 245 aa3.43□□□□□ -1.86
SPT3YDR392W SNX4P47057 423 aa3.43□□□□□ -1.86
SPT3YDR392W VPS55P47111 140 aa3.43□□□□□ -1.86
SPT3YDR392W CRH1P53301 507 aa3.43□□□□□ -1.86
SPT3YDR392W FYV6P53913 173 aa3.43□□□□□ -1.86
SPT3YDR392W ASI3P53983 676 aa3.43□□□□□ -1.86
SPT3YDR392W DAS2Q12084 232 aa3.43□□□□□ -1.86
SPT3YDR392W YIL002W-AQ3E7Z5 69 aa3.43□□□□□ -1.86
SPT3YDR392W GDH1P07262 454 aaKnown RBP3.42□□□□□ -1.86
SPT3YDR392W ATR1P13090 542 aa3.42□□□□□ -1.86
SPT3YDR392W CAM1P29547 415 aaKnown RBP3.42□□□□□ -1.86
SPT3YDR392W COX13P32799 129 aa3.42□□□□□ -1.86
SPT3YDR392W YKL063CP35725 167 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms