RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 AAASQ9NRG9 546 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 UTP11Q9Y3A2 253 aaKnown RBP6.08□□□□□ -1.44
RTTN-218ENST00000640408 ZNF711Q9Y462 761 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 PSME4Q14997 1843 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 LRRIQ3A6PVS8 624 aaPredicted RBP6.08□□□□□ -1.44
RTTN-218ENST00000640408 CD2BP2O95400 341 aaKnown RBP6.08□□□□□ -1.44
RTTN-218ENST00000640408 ATF7P17544 494 aaPredicted RBP6.08□□□□□ -1.44
RTTN-218ENST00000640408 PHBP35232 272 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 RTP1P59025 263 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 NFX1Q12986 1120 aaKnown RBP6.08□□□□□ -1.44
RTTN-218ENST00000640408 PPIGQ13427 754 aaKnown RBP eCLIP6.08□□□□□ -1.44
RTTN-218ENST00000640408 ITGA7Q13683 1181 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 LCA5Q86VQ0 697 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 CCDC42Q96M95 316 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 ZBED2Q9BTP6 218 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 TUBB6Q9BUF5 446 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 CSRNP2Q9H175 543 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 KIAA1551Q9HCM1 1747 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 N4BP1O75113 896 aaKnown RBP6.08□□□□□ -1.44
RTTN-218ENST00000640408 GADD45BO75293 160 aaPredicted RBP6.08□□□□□ -1.44
RTTN-218ENST00000640408 CNMDO75829 334 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 PSMD10O75832 226 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 CYBAP13498 195 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 RFC2P35250 354 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 NLRP12P59046 1061 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 PHEXP78562 749 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 MOGSQ13724 837 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 WDR75Q8IWA0 830 aaKnown RBP6.08□□□□□ -1.44
RTTN-218ENST00000640408 ELOA2Q8IYF1 753 aaPredicted RBP6.08□□□□□ -1.44
RTTN-218ENST00000640408 NPLOC4Q8TAT6 608 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 CACTINQ8WUQ7 758 aaKnown RBP6.08□□□□□ -1.44
RTTN-218ENST00000640408 ATP2A3Q93084 1043 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 ARHGAP39Q9C0H5 1083 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 XAB2Q9HCS7 855 aaKnown RBP6.08□□□□□ -1.44
RTTN-218ENST00000640408 UBN1Q9NPG3 1134 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 PRDM5Q9NQX1 630 aaPredicted RBP6.08□□□□□ -1.44
RTTN-218ENST00000640408 UBAP1Q9NZ09 502 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 ATP11BQ9Y2G3 1177 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 SAR1BQ9Y6B6 198 aa6.08□□□□□ -1.44
RTTN-218ENST00000640408 ACTN4O43707 911 aaKnown RBP6.07□□□□□ -1.44
RTTN-218ENST00000640408 P4HA1P13674 534 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 TMED10P49755 219 aaKnown RBP6.07□□□□□ -1.44
RTTN-218ENST00000640408 EPHB4P54760 987 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 YWHAEP62258 255 aaKnown RBP6.07□□□□□ -1.44
RTTN-218ENST00000640408 TYW1BQ6NUM6 668 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 ITFG2Q969R8 447 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 MRPL4Q9BYD3 311 aaKnown RBP6.07□□□□□ -1.44
RTTN-218ENST00000640408 SUCLA2Q9P2R7 463 aaPredicted RBP6.07□□□□□ -1.44
RTTN-218ENST00000640408 MYO1AQ9UBC5 1043 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 PPP1R11O60927 126 aaPredicted RBP6.07□□□□□ -1.44
RTTN-218ENST00000640408 RPS6KA5O75582 802 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 EPB41P11171 864 aaKnown RBP6.07□□□□□ -1.44
RTTN-218ENST00000640408 MARK3P27448 753 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 FAM133BQ5BKY9 247 aaKnown RBP6.07□□□□□ -1.44
RTTN-218ENST00000640408 MFSD4BQ5TF39 518 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 UNC13DQ70J99 1090 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 CEP70Q8NHQ1 597 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 B4GALNT2Q8NHY0 566 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 URGCPQ8TCY9 931 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 TRIB2Q92519 343 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 TOX2Q96NM4 488 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 SENP6Q9GZR1 1112 aaPredicted RBP6.07□□□□□ -1.44
RTTN-218ENST00000640408 SQORQ9Y6N5 450 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 DENND3A2RUS2 1198 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 KRT75O95678 551 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 MAPTP10636 758 aaKnown RBP6.07□□□□□ -1.44
RTTN-218ENST00000640408 GFAPP14136 432 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 INSRRP14616 1297 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 PFKFB1P16118 471 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 PLCG1P19174 1290 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 KLRC1P26715 233 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 POU5F1BQ06416 359 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 ADCY2Q08462 1091 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 MYO1EQ12965 1108 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 CTTNQ14247 550 aaKnown RBP6.07□□□□□ -1.44
RTTN-218ENST00000640408 FAM173BQ6P4H8 233 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 CXCL17Q6UXB2 119 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 TTC39CQ8N584 583 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 ZNF483Q8TF39 744 aaPredicted RBP6.07□□□□□ -1.44
RTTN-218ENST00000640408 KLHL29Q96CT2 875 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 STAMBPL1Q96FJ0 436 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 CYP26B1Q9NR63 512 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 CLIC4Q9Y696 253 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 UBE4BO95155 1302 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 A0A1B0GVL5 298 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 SMIM35A0A1B0GVV1 85 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 ARHGAP10A1A4S6 786 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 K7ENM7 598 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 HNRNPDLO14979 420 aaKnown RBP6.07□□□□□ -1.44
RTTN-218ENST00000640408 SERPINI2O75830 405 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 TMCC1O94876 653 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 PGK1P00558 417 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 ASGR1P07306 291 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 CTNNA1P35221 906 aaKnown RBP6.07□□□□□ -1.44
RTTN-218ENST00000640408 ESRRGP62508 458 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 NOP14P78316 857 aaKnown RBP6.07□□□□□ -1.44
RTTN-218ENST00000640408 LRRC41Q15345 812 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 GRIK4Q16099 956 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 CFAP221Q4G0U5 840 aa6.07□□□□□ -1.44
RTTN-218ENST00000640408 OLFML1Q6UWY5 402 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms