RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 EGFLAMQ63HQ2 1017 aa6.65□□□□□ -1.34
CCDC7-216ENST00000640058 LRRC55Q6ZSA7 311 aa6.65□□□□□ -1.34
CCDC7-216ENST00000640058 RHOUQ7L0Q8 258 aa6.65□□□□□ -1.34
CCDC7-216ENST00000640058 FATE1Q969F0 183 aa6.65□□□□□ -1.34
CCDC7-216ENST00000640058 ORAI2Q96SN7 254 aa6.65□□□□□ -1.34
CCDC7-216ENST00000640058 LDAHQ9H6V9 325 aa6.65□□□□□ -1.34
CCDC7-216ENST00000640058 CLCA2Q9UQC9 943 aa6.65□□□□□ -1.34
CCDC7-216ENST00000640058 ZNF185O15231 689 aa6.64□□□□□ -1.35
CCDC7-216ENST00000640058 RAMP2O60895 175 aa6.64□□□□□ -1.35
CCDC7-216ENST00000640058 IGSF3O75054 1194 aa6.64□□□□□ -1.35
CCDC7-216ENST00000640058 LAG3P18627 525 aa6.64□□□□□ -1.35
CCDC7-216ENST00000640058 PER3P56645 1201 aa6.64□□□□□ -1.35
CCDC7-216ENST00000640058 NOMO1Q15155 1222 aa6.64□□□□□ -1.35
CCDC7-216ENST00000640058 BMT2Q1RMZ1 405 aa6.64□□□□□ -1.35
CCDC7-216ENST00000640058 MUM1L1Q5H9M0 696 aa6.64□□□□□ -1.35
CCDC7-216ENST00000640058 LY6G5CQ5SRR4 150 aa6.64□□□□□ -1.35
CCDC7-216ENST00000640058 ULK2Q8IYT8 1036 aa6.64□□□□□ -1.35
CCDC7-216ENST00000640058 DCLRE1CQ96SD1 692 aaKnown RBP6.64□□□□□ -1.35
CCDC7-216ENST00000640058 ADI1Q9BV57 179 aa6.64□□□□□ -1.35
CCDC7-216ENST00000640058 SLC46A2Q9BY10 475 aa6.64□□□□□ -1.35
CCDC7-216ENST00000640058 GREM2Q9H772 168 aa6.64□□□□□ -1.35
CCDC7-216ENST00000640058 ANKFY1Q9P2R3 1169 aa6.64□□□□□ -1.35
CCDC7-216ENST00000640058 ZBTB21Q9ULJ3 1066 aa6.64□□□□□ -1.35
CCDC7-216ENST00000640058 CXorf49A8MYA2 514 aaPredicted RBP6.63□□□□□ -1.35
CCDC7-216ENST00000640058 RAP2AP10114 183 aa6.63□□□□□ -1.35
CCDC7-216ENST00000640058 POU3F3P20264 500 aaPredicted RBP6.63□□□□□ -1.35
CCDC7-216ENST00000640058 PPP3CAQ08209 521 aa6.63□□□□□ -1.35
CCDC7-216ENST00000640058 PTPAQ15257 358 aa6.63□□□□□ -1.35
CCDC7-216ENST00000640058 PDCD4Q53EL6 469 aaKnown RBP6.63□□□□□ -1.35
CCDC7-216ENST00000640058 FAM47AQ5JRC9 791 aa6.63□□□□□ -1.35
CCDC7-216ENST00000640058 LAIR1Q6GTX8 287 aa6.63□□□□□ -1.35
CCDC7-216ENST00000640058 PQLC1Q8N2U9 271 aa6.63□□□□□ -1.35
CCDC7-216ENST00000640058 OR7D4Q8NG98 312 aa6.63□□□□□ -1.35
CCDC7-216ENST00000640058 STON2Q8WXE9 905 aa6.63□□□□□ -1.35
CCDC7-216ENST00000640058 SLC2A13Q96QE2 648 aa6.63□□□□□ -1.35
CCDC7-216ENST00000640058 PRRX2Q99811 253 aa6.63□□□□□ -1.35
CCDC7-216ENST00000640058 BCO1Q9HAY6 547 aa6.63□□□□□ -1.35
CCDC7-216ENST00000640058 AKIP1Q9NQ31 210 aa6.63□□□□□ -1.35
CCDC7-216ENST00000640058 RBM12Q9NTZ6 932 aaKnown RBP6.63□□□□□ -1.35
CCDC7-216ENST00000640058 C11orf21Q9P2W6 132 aa6.63□□□□□ -1.35
CCDC7-216ENST00000640058 SCOCQ9UIL1 159 aa6.63□□□□□ -1.35
CCDC7-216ENST00000640058 PRKAB1Q9Y478 270 aa6.63□□□□□ -1.35
CCDC7-216ENST00000640058 CHST2Q9Y4C5 530 aa6.63□□□□□ -1.35
CCDC7-216ENST00000640058 PCDHGA2Q9Y5H1 932 aa6.63□□□□□ -1.35
CCDC7-216ENST00000640058 WASHC2AQ641Q2 1341 aa6.62□□□□□ -1.35
CCDC7-216ENST00000640058 CENPVL1A0A0U1RR11 272 aa6.62□□□□□ -1.35
CCDC7-216ENST00000640058 FOXN1O15353 648 aa6.62□□□□□ -1.35
CCDC7-216ENST00000640058 NDUFA10O95299 355 aa6.62□□□□□ -1.35
CCDC7-216ENST00000640058 ZSCAN20P17040 1043 aaPredicted RBP6.62□□□□□ -1.35
CCDC7-216ENST00000640058 SREBF1P36956 1147 aa6.62□□□□□ -1.35
CCDC7-216ENST00000640058 CHN2P52757 468 aa6.62□□□□□ -1.35
CCDC7-216ENST00000640058 ERVK-21P61565 698 aa6.62□□□□□ -1.35
CCDC7-216ENST00000640058 FAPQ12884 760 aa6.62□□□□□ -1.35
CCDC7-216ENST00000640058 ATXN7L2Q5T6C5 722 aaPredicted RBP6.62□□□□□ -1.35
CCDC7-216ENST00000640058 MBNL2Q5VZF2 373 aaKnown RBP6.62□□□□□ -1.35
CCDC7-216ENST00000640058 RNF219Q5W0B1 726 aaPredicted RBP6.62□□□□□ -1.35
CCDC7-216ENST00000640058 DRICH1Q6PGQ1 229 aaPredicted RBP6.62□□□□□ -1.35
CCDC7-216ENST00000640058 FAM180AQ6UWF9 173 aa6.62□□□□□ -1.35
CCDC7-216ENST00000640058 ZNF572Q7Z3I7 529 aaPredicted RBP6.62□□□□□ -1.35
CCDC7-216ENST00000640058 ZFP28Q8NHY6 868 aa6.62□□□□□ -1.35
CCDC7-216ENST00000640058 AGAP2Q99490 1192 aa6.62□□□□□ -1.35
CCDC7-216ENST00000640058 SENP6Q9GZR1 1112 aaPredicted RBP6.62□□□□□ -1.35
CCDC7-216ENST00000640058 DNM3Q9UQ16 869 aa6.62□□□□□ -1.35
CCDC7-216ENST00000640058 MAP3K2Q9Y2U5 619 aa6.62□□□□□ -1.35
CCDC7-216ENST00000640058 USP15Q9Y4E8 981 aaPredicted RBP6.62□□□□□ -1.35
CCDC7-216ENST00000640058 DMRT1Q9Y5R6 373 aa6.62□□□□□ -1.35
CCDC7-216ENST00000640058 TMEM191CA6NGB0 347 aa6.61□□□□□ -1.35
CCDC7-216ENST00000640058 RNASET2O00584 256 aaKnown RBP6.61□□□□□ -1.35
CCDC7-216ENST00000640058 RBP3P10745 1247 aa6.61□□□□□ -1.35
CCDC7-216ENST00000640058 GSPT1P15170 499 aaKnown RBP6.61□□□□□ -1.35
CCDC7-216ENST00000640058 ALOX15P16050 662 aaPredicted RBP6.61□□□□□ -1.35
CCDC7-216ENST00000640058 MGAT1P26572 445 aa6.61□□□□□ -1.35
CCDC7-216ENST00000640058 SLC5A3P53794 718 aa6.61□□□□□ -1.35
CCDC7-216ENST00000640058 CLRN1P58418 232 aa6.61□□□□□ -1.35
CCDC7-216ENST00000640058 MALLQ13021 153 aa6.61□□□□□ -1.35
CCDC7-216ENST00000640058 AFMIDQ63HM1 303 aa6.61□□□□□ -1.35
CCDC7-216ENST00000640058 NEU1Q99519 415 aa6.61□□□□□ -1.35
CCDC7-216ENST00000640058 HS3ST4Q9Y661 456 aa6.61□□□□□ -1.35
CCDC7-216ENST00000640058 ATRNL1Q5VV63 1379 aa6.6□□□□□ -1.35
CCDC7-216ENST00000640058 UNC119BA6NIH7 251 aa6.6□□□□□ -1.35
CCDC7-216ENST00000640058 OVOL3O00110 214 aa6.6□□□□□ -1.35
CCDC7-216ENST00000640058 MCAMP43121 646 aa6.6□□□□□ -1.35
CCDC7-216ENST00000640058 MTNR1BP49286 362 aa6.6□□□□□ -1.35
CCDC7-216ENST00000640058 CLUL1Q15846 466 aa6.6□□□□□ -1.35
CCDC7-216ENST00000640058 PCSK4Q6UW60 755 aa6.6□□□□□ -1.35
CCDC7-216ENST00000640058 DDX42Q86XP3 938 aaKnown RBP eCLIP6.6□□□□□ -1.35
CCDC7-216ENST00000640058 PLXDC1Q8IUK5 500 aa6.6□□□□□ -1.35
CCDC7-216ENST00000640058 PPM1NQ8N819 430 aa6.6□□□□□ -1.35
CCDC7-216ENST00000640058 MYEOVQ96EZ4 313 aa6.6□□□□□ -1.35
CCDC7-216ENST00000640058 LANCL2Q9NS86 450 aa6.6□□□□□ -1.35
CCDC7-216ENST00000640058 MCM8Q9UJA3 840 aa6.6□□□□□ -1.35
CCDC7-216ENST00000640058 GPR45Q9Y5Y3 372 aa6.6□□□□□ -1.35
CCDC7-216ENST00000640058 DRGXA6NNA5 263 aa6.59□□□□□ -1.35
CCDC7-216ENST00000640058 PJA2O43164 708 aa6.59□□□□□ -1.35
CCDC7-216ENST00000640058 SNRPA1P09661 255 aaKnown RBP6.59□□□□□ -1.35
CCDC7-216ENST00000640058 FPR1P21462 350 aa6.59□□□□□ -1.35
CCDC7-216ENST00000640058 ALDH1A3P47895 512 aa6.59□□□□□ -1.35
CCDC7-216ENST00000640058 SP140Q13342 867 aa6.59□□□□□ -1.35
CCDC7-216ENST00000640058 SEPT2Q15019 361 aa6.59□□□□□ -1.35
CCDC7-216ENST00000640058 ANO4Q32M45 955 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms