RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 ZNF131P52739 623 aa19.44■□□□□ 0.7
PTPN11-207ENST00000639857 KARSQ15046 597 aaKnown RBP19.44■□□□□ 0.7
PTPN11-207ENST00000639857 TPRNQ4KMQ1 711 aa19.44■□□□□ 0.7
PTPN11-207ENST00000639857 GPBP1Q86WP2 473 aa19.44■□□□□ 0.7
PTPN11-207ENST00000639857 TMEM161BQ8NDZ6 487 aa19.44■□□□□ 0.7
PTPN11-207ENST00000639857 LARP4BQ92615 738 aaKnown RBP19.44■□□□□ 0.7
PTPN11-207ENST00000639857 EMILIN2Q9BXX0 1053 aa19.44■□□□□ 0.7
PTPN11-207ENST00000639857 MRPL17Q9NRX2 175 aaKnown RBP19.44■□□□□ 0.7
PTPN11-207ENST00000639857 TOPORSQ9NS56 1045 aaPredicted RBP19.44■□□□□ 0.7
PTPN11-207ENST00000639857 FOXD4L1Q9NU39 408 aa19.44■□□□□ 0.7
PTPN11-207ENST00000639857 DZANK1Q9NVP4 752 aa19.44■□□□□ 0.7
PTPN11-207ENST00000639857 KLK14Q9P0G3 267 aa19.44■□□□□ 0.7
PTPN11-207ENST00000639857 CCDC39Q9UFE4 941 aa19.44■□□□□ 0.7
PTPN11-207ENST00000639857 PRG3Q9Y2Y8 225 aaPredicted RBP19.44■□□□□ 0.7
PTPN11-207ENST00000639857 C5orf42Q9H799 3197 aa19.44■□□□□ 0.7
PTPN11-207ENST00000639857 MTCL1Q9Y4B5 1905 aaKnown RBP19.43■□□□□ 0.7
PTPN11-207ENST00000639857 PTGESO14684 152 aa19.43■□□□□ 0.7
PTPN11-207ENST00000639857 THP07101 528 aa19.43■□□□□ 0.7
PTPN11-207ENST00000639857 HSP90AA1P07900 732 aaKnown RBP19.43■□□□□ 0.7
PTPN11-207ENST00000639857 MAPTP10636 758 aaKnown RBP19.43■□□□□ 0.7
PTPN11-207ENST00000639857 MCF2P10911 925 aa19.43■□□□□ 0.7
PTPN11-207ENST00000639857 NASPP49321 788 aaPredicted RBP19.43■□□□□ 0.7
PTPN11-207ENST00000639857 NCKAP1LP55160 1127 aa19.43■□□□□ 0.7
PTPN11-207ENST00000639857 SLC39A14Q15043 492 aa19.43■□□□□ 0.7
PTPN11-207ENST00000639857 ZNF568Q3ZCX4 644 aa19.43■□□□□ 0.7
PTPN11-207ENST00000639857 ARSHQ5FYA8 562 aa19.43■□□□□ 0.7
PTPN11-207ENST00000639857 MPZL3Q6UWV2 235 aa19.43■□□□□ 0.7
PTPN11-207ENST00000639857 ZPBP2Q6X784 338 aa19.43■□□□□ 0.7
PTPN11-207ENST00000639857 SUSD6Q92537 303 aa19.43■□□□□ 0.7
PTPN11-207ENST00000639857 REEP2Q9BRK0 252 aa19.43■□□□□ 0.7
PTPN11-207ENST00000639857 CCDC94Q9BW85 323 aaPredicted RBP19.43■□□□□ 0.7
PTPN11-207ENST00000639857 CDT1Q9H211 546 aa19.43■□□□□ 0.7
PTPN11-207ENST00000639857 USP15Q9Y4E8 981 aaPredicted RBP19.43■□□□□ 0.7
PTPN11-207ENST00000639857 SFI1A8K8P3 1242 aa19.42■□□□□ 0.7
PTPN11-207ENST00000639857 LILRB3O75022 631 aa19.42■□□□□ 0.7
PTPN11-207ENST00000639857 TOM1L1O75674 476 aa19.42■□□□□ 0.7
PTPN11-207ENST00000639857 C1RP00736 705 aa19.42■□□□□ 0.7
PTPN11-207ENST00000639857 MARCKSP29966 332 aaPredicted RBP19.42■□□□□ 0.7
PTPN11-207ENST00000639857 SSTR3P32745 418 aaPredicted RBP19.42■□□□□ 0.7
PTPN11-207ENST00000639857 CA8P35219 290 aa19.42■□□□□ 0.7
PTPN11-207ENST00000639857 DDIT3P35638 169 aa19.42■□□□□ 0.7
PTPN11-207ENST00000639857 GLUD2P49448 558 aa19.42■□□□□ 0.7
PTPN11-207ENST00000639857 YARSP54577 528 aaKnown RBP19.42■□□□□ 0.7
PTPN11-207ENST00000639857 RBM10P98175 930 aaKnown RBP19.42■□□□□ 0.7
PTPN11-207ENST00000639857 ITIH3Q06033 890 aa19.42■□□□□ 0.7
PTPN11-207ENST00000639857 RAD51AP2Q09MP3 1159 aa19.42■□□□□ 0.7
PTPN11-207ENST00000639857 HSP90AA2PQ14568 343 aaPredicted RBP19.42■□□□□ 0.7
PTPN11-207ENST00000639857 FAM173BQ6P4H8 233 aa19.42■□□□□ 0.7
PTPN11-207ENST00000639857 KRI1Q8N9T8 703 aaKnown RBP19.42■□□□□ 0.7
PTPN11-207ENST00000639857 LRRC15Q8TF66 581 aa19.42■□□□□ 0.7
PTPN11-207ENST00000639857 USP28Q96RU2 1077 aa19.42■□□□□ 0.7
PTPN11-207ENST00000639857 TARS2Q9BW92 718 aaKnown RBP19.42■□□□□ 0.7
PTPN11-207ENST00000639857 C1QTNF1Q9BXJ1 281 aa19.42■□□□□ 0.7
PTPN11-207ENST00000639857 S1PR5Q9H228 398 aa19.42■□□□□ 0.7
PTPN11-207ENST00000639857 PARVGQ9HBI0 331 aa19.42■□□□□ 0.7
PTPN11-207ENST00000639857 CD320Q9NPF0 282 aa19.42■□□□□ 0.7
PTPN11-207ENST00000639857 ADAM28Q9UKQ2 775 aa19.42■□□□□ 0.7
PTPN11-207ENST00000639857 USP20Q9Y2K6 914 aa19.42■□□□□ 0.7
PTPN11-207ENST00000639857 PLXNA3P51805 1871 aa19.41■□□□□ 0.7
PTPN11-207ENST00000639857 ABLIM1O14639 778 aa19.41■□□□□ 0.7
PTPN11-207ENST00000639857 DSG1Q02413 1049 aa19.41■□□□□ 0.7
PTPN11-207ENST00000639857 CREMQ03060 361 aa19.41■□□□□ 0.7
PTPN11-207ENST00000639857 MCM6Q14566 821 aa19.41■□□□□ 0.7
PTPN11-207ENST00000639857 NAB2Q15742 525 aa19.41■□□□□ 0.7
PTPN11-207ENST00000639857 XKR4Q5GH76 650 aa19.41■□□□□ 0.7
PTPN11-207ENST00000639857 LLGL2Q6P1M3 1020 aa19.41■□□□□ 0.7
PTPN11-207ENST00000639857 SYCE2Q6PIF2 218 aa19.41■□□□□ 0.7
PTPN11-207ENST00000639857 SLC22A17Q8WUG5 538 aa19.41■□□□□ 0.7
PTPN11-207ENST00000639857 AUTS2Q8WXX7 1259 aa19.41■□□□□ 0.7
PTPN11-207ENST00000639857 EPSTI1Q96J88 318 aa19.41■□□□□ 0.7
PTPN11-207ENST00000639857 ZNF396Q96N95 335 aaPredicted RBP19.41■□□□□ 0.7
PTPN11-207ENST00000639857 CHST7Q9NS84 486 aa19.41■□□□□ 0.7
PTPN11-207ENST00000639857 GDAQ9Y2T3 454 aa19.41■□□□□ 0.7
PTPN11-207ENST00000639857 SF3B1O75533 1304 aaKnown RBP eCLIP19.41■□□□□ 0.75e-6■■■■■ 114.9
PTPN11-207ENST00000639857 DENND4AQ7Z401 1863 aa19.41■□□□□ 0.7
PTPN11-207ENST00000639857 TMEM189-UBE2V1I3L0A0 370 aa19.4■□□□□ 0.7
PTPN11-207ENST00000639857 TBCAO75347 108 aaKnown RBP19.4■□□□□ 0.7
PTPN11-207ENST00000639857 FAM13AO94988 1023 aa19.4■□□□□ 0.7
PTPN11-207ENST00000639857 KRT18P05783 430 aaKnown RBP19.4■□□□□ 0.7
PTPN11-207ENST00000639857 ELAVL2Q12926 359 aaKnown RBP19.4■□□□□ 0.7
PTPN11-207ENST00000639857 CBX2Q14781 532 aaPredicted RBP19.4■□□□□ 0.7
PTPN11-207ENST00000639857 NOLC1Q14978 699 aaKnown RBP eCLIP19.4■□□□□ 0.7
PTPN11-207ENST00000639857 USP41Q3LFD5 358 aa19.4■□□□□ 0.7
PTPN11-207ENST00000639857 KIAA0319Q5VV43 1072 aa19.4■□□□□ 0.7
PTPN11-207ENST00000639857 FUT10Q6P4F1 479 aa19.4■□□□□ 0.7
PTPN11-207ENST00000639857 HAUS6Q7Z4H7 955 aa19.4■□□□□ 0.7
PTPN11-207ENST00000639857 UROC1Q96N76 676 aa19.4■□□□□ 0.7
PTPN11-207ENST00000639857 NECTIN4Q96NY8 510 aa19.4■□□□□ 0.7
PTPN11-207ENST00000639857 KLHL5Q96PQ7 755 aa19.4■□□□□ 0.7
PTPN11-207ENST00000639857 PPP1R10Q96QC0 940 aaKnown RBP19.4■□□□□ 0.7
PTPN11-207ENST00000639857 TCHPQ9BT92 498 aa19.4■□□□□ 0.7
PTPN11-207ENST00000639857 PHF7Q9BWX1 381 aaPredicted RBP19.4■□□□□ 0.7
PTPN11-207ENST00000639857 RXFP1Q9HBX9 757 aa19.4■□□□□ 0.7
PTPN11-207ENST00000639857 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.4■□□□□ 0.7
PTPN11-207ENST00000639857 SLC38A7Q9NVC3 462 aa19.4■□□□□ 0.7
PTPN11-207ENST00000639857 DPP7Q9UHL4 492 aa19.4■□□□□ 0.7
PTPN11-207ENST00000639857 VWA8A3KMH1 1905 aa19.39■□□□□ 0.7
PTPN11-207ENST00000639857 NPHP3-ACAD11A0A0J9YXS1 232 aa19.39■□□□□ 0.69
PTPN11-207ENST00000639857 PPP6R2O75170 966 aa19.39■□□□□ 0.69
PTPN11-207ENST00000639857 YEATS4O95619 227 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms