RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 DIS3Q9Y2L1 958 aaKnown RBP23.16■■□□□ 1.3
CLN6-224ENST00000638076 A0A0G2JMZ2 1700 aa23.16■■□□□ 1.3
CLN6-224ENST00000638076 A0A0G2JLL6 359 aaPredicted RBP23.15■■□□□ 1.3
CLN6-224ENST00000638076 IREB2P48200 963 aaKnown RBP23.15■■□□□ 1.3
CLN6-224ENST00000638076 TCEAL1Q15170 157 aa23.15■■□□□ 1.3
CLN6-224ENST00000638076 PRRT2Q7Z6L0 340 aaPredicted RBP23.15■■□□□ 1.3
CLN6-224ENST00000638076 AGO2Q9UKV8 859 aaKnown RBP23.15■■□□□ 1.3
CLN6-224ENST00000638076 ACOT2P49753 483 aa23.15■■□□□ 1.3
CLN6-224ENST00000638076 NLRP11P59045 1033 aaKnown RBP23.15■■□□□ 1.3
CLN6-224ENST00000638076 ERVK-9P63128 1117 aa23.15■■□□□ 1.3
CLN6-224ENST00000638076 C15orf39Q6ZRI6 1047 aa23.15■■□□□ 1.3
CLN6-224ENST00000638076 EEPD1Q7L9B9 569 aa23.15■■□□□ 1.3
CLN6-224ENST00000638076 PROCA1Q8NCQ7 364 aaPredicted RBP23.15■■□□□ 1.3
CLN6-224ENST00000638076 PSPC1Q8WXF1 523 aaKnown RBP23.15■■□□□ 1.3
CLN6-224ENST00000638076 FNBP1Q96RU3 617 aa23.15■■□□□ 1.3
CLN6-224ENST00000638076 CARD9Q9H257 536 aa23.15■■□□□ 1.3
CLN6-224ENST00000638076 R3HDMLQ9H3Y0 253 aa23.15■■□□□ 1.3
CLN6-224ENST00000638076 STYXL1Q9Y6J8 313 aa23.15■■□□□ 1.3
CLN6-224ENST00000638076 OTOFQ9HC10 1997 aa23.15■■□□□ 1.3
CLN6-224ENST00000638076 K7ERI5 159 aa23.14■■□□□ 1.3
CLN6-224ENST00000638076 ATMINO43313 823 aaPredicted RBP23.14■■□□□ 1.3
CLN6-224ENST00000638076 CDR2Q01850 454 aa23.14■■□□□ 1.3
CLN6-224ENST00000638076 C11orf63Q6NUN7 778 aa23.14■■□□□ 1.3
CLN6-224ENST00000638076 RNPC3Q96LT9 517 aaKnown RBP23.14■■□□□ 1.3
CLN6-224ENST00000638076 HAPLN2Q9GZV7 340 aa23.14■■□□□ 1.3
CLN6-224ENST00000638076 TNNI1P19237 187 aa23.14■■□□□ 1.29
CLN6-224ENST00000638076 GUCY2FP51841 1108 aa23.14■■□□□ 1.29
CLN6-224ENST00000638076 WNT7BP56706 349 aa23.14■■□□□ 1.29
CLN6-224ENST00000638076 GCNT1Q02742 428 aa23.14■■□□□ 1.29
CLN6-224ENST00000638076 NEDD9Q14511 834 aa23.14■■□□□ 1.29
CLN6-224ENST00000638076 PSMD6Q15008 389 aa23.14■■□□□ 1.29
CLN6-224ENST00000638076 CLMNQ96JQ2 1002 aa23.14■■□□□ 1.29
CLN6-224ENST00000638076 ZBTB45Q96K62 511 aaPredicted RBP23.14■■□□□ 1.29
CLN6-224ENST00000638076 ASCC2Q9H1I8 757 aaPredicted RBP23.14■■□□□ 1.29
CLN6-224ENST00000638076 TAF1DQ9H5J8 278 aaPredicted RBP23.14■■□□□ 1.29
CLN6-224ENST00000638076 AMACRQ9UHK6 382 aa23.14■■□□□ 1.29
CLN6-224ENST00000638076 ZC3H11AO75152 810 aaKnown RBP eCLIP23.13■■□□□ 1.29
CLN6-224ENST00000638076 KRT5P13647 590 aa23.13■■□□□ 1.29
CLN6-224ENST00000638076 STAT5BP51692 787 aa23.13■■□□□ 1.29
CLN6-224ENST00000638076 CLDN10P78369 228 aa23.13■■□□□ 1.29
CLN6-224ENST00000638076 ALS2CLQ60I27 953 aa23.13■■□□□ 1.29
CLN6-224ENST00000638076 DDX1Q92499 740 aaKnown RBP23.13■■□□□ 1.29
CLN6-224ENST00000638076 ALG3Q92685 438 aa23.13■■□□□ 1.29
CLN6-224ENST00000638076 KCNN1Q92952 543 aa23.13■■□□□ 1.29
CLN6-224ENST00000638076 C1orf112Q9NSG2 853 aa23.13■■□□□ 1.29
CLN6-224ENST00000638076 NRBP2Q9NSY0 501 aa23.13■■□□□ 1.29
CLN6-224ENST00000638076 PAPPA2Q9BXP8 1791 aa23.13■■□□□ 1.29
CLN6-224ENST00000638076 SBF1O95248 1867 aa23.13■■□□□ 1.29
CLN6-224ENST00000638076 SRCAPQ6ZRS2 3230 aa23.13■■□□□ 1.29
CLN6-224ENST00000638076 TMEM110-MUSTN1A8MSY1 372 aa23.13■■□□□ 1.29
CLN6-224ENST00000638076 HSF2BPO75031 334 aa23.13■■□□□ 1.29
CLN6-224ENST00000638076 ZNF211Q13398 564 aaPredicted RBP23.13■■□□□ 1.29
CLN6-224ENST00000638076 ENOSF1Q7L5Y1 443 aa23.13■■□□□ 1.29
CLN6-224ENST00000638076 GOLGA6L1Q8N7Z2 621 aa23.13■■□□□ 1.29
CLN6-224ENST00000638076 AFAP1L1Q8TED9 768 aa23.13■■□□□ 1.29
CLN6-224ENST00000638076 RNF181Q9P0P0 153 aa23.13■■□□□ 1.29
CLN6-224ENST00000638076 KIAA0391O15091 583 aaKnown RBP23.12■■□□□ 1.29
CLN6-224ENST00000638076 CNMDO75829 334 aa23.12■■□□□ 1.29
CLN6-224ENST00000638076 GGPS1O95749 300 aa23.12■■□□□ 1.29
CLN6-224ENST00000638076 PIGRP01833 764 aa23.12■■□□□ 1.29
CLN6-224ENST00000638076 SCP2P22307 547 aa23.12■■□□□ 1.29
CLN6-224ENST00000638076 TCF7P36402 384 aaPredicted RBP23.12■■□□□ 1.29
CLN6-224ENST00000638076 RFC5P40937 340 aa23.12■■□□□ 1.29
CLN6-224ENST00000638076 TARBP2Q15633 366 aaKnown RBP23.12■■□□□ 1.29
CLN6-224ENST00000638076 LY6KQ17RY6 165 aa23.12■■□□□ 1.29
CLN6-224ENST00000638076 NAA35Q5VZE5 725 aa23.12■■□□□ 1.29
CLN6-224ENST00000638076 FAM160B1Q5W0V3 765 aa23.12■■□□□ 1.29
CLN6-224ENST00000638076 CRELD2Q6UXH1 353 aaPredicted RBP23.12■■□□□ 1.29
CLN6-224ENST00000638076 WHAMMQ8TF30 809 aa23.12■■□□□ 1.29
CLN6-224ENST00000638076 TARS2Q9BW92 718 aaKnown RBP23.12■■□□□ 1.29
CLN6-224ENST00000638076 SLITRK6Q9H5Y7 841 aa23.12■■□□□ 1.29
CLN6-224ENST00000638076 TGFB3P10600 412 aa23.11■■□□□ 1.29
CLN6-224ENST00000638076 MESDQ14696 234 aa23.11■■□□□ 1.29
CLN6-224ENST00000638076 ZACNQ401N2 412 aa23.11■■□□□ 1.29
CLN6-224ENST00000638076 SLFN12LQ6IEE8 588 aa23.11■■□□□ 1.29
CLN6-224ENST00000638076 MOB2Q70IA6 237 aa23.11■■□□□ 1.29
CLN6-224ENST00000638076 ERO1BQ86YB8 467 aa23.11■■□□□ 1.29
CLN6-224ENST00000638076 SEPT1Q8WYJ6 367 aa23.11■■□□□ 1.29
CLN6-224ENST00000638076 RUFY1Q96T51 708 aa23.11■■□□□ 1.29
CLN6-224ENST00000638076 ANKFY1Q9P2R3 1169 aa23.11■■□□□ 1.29
CLN6-224ENST00000638076 NR2E1Q9Y466 385 aa23.11■■□□□ 1.29
CLN6-224ENST00000638076 MTA2O94776 668 aa23.11■■□□□ 1.29
CLN6-224ENST00000638076 HLTFQ14527 1009 aaKnown RBP eCLIP23.11■■□□□ 1.29
CLN6-224ENST00000638076 TDRD10Q5VZ19 366 aaKnown RBP23.11■■□□□ 1.29
CLN6-224ENST00000638076 CCDC26Q8TAB7 109 aa23.11■■□□□ 1.29
CLN6-224ENST00000638076 ZNF653Q96CK0 615 aa23.11■■□□□ 1.29
CLN6-224ENST00000638076 ZIM3Q96PE6 472 aa23.11■■□□□ 1.29
CLN6-224ENST00000638076 SH3GL2Q99962 352 aa23.11■■□□□ 1.29
CLN6-224ENST00000638076 NUP85Q9BW27 656 aa23.11■■□□□ 1.29
CLN6-224ENST00000638076 MIF4GDA9UHW6 222 aaKnown RBP23.1■■□□□ 1.29
CLN6-224ENST00000638076 CALCAP01258 141 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 C4BPAP04003 597 aaKnown RBP23.1■■□□□ 1.29
CLN6-224ENST00000638076 EDN1P05305 212 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 COMTP21964 271 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 ECHS1P30084 290 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 CUL1Q13616 776 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 KCTD19Q17RG1 926 aaPredicted RBP23.1■■□□□ 1.29
CLN6-224ENST00000638076 WDR44Q5JSH3 913 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 METTL7BQ6UX53 244 aa23.1■■□□□ 1.29
CLN6-224ENST00000638076 MAATS1Q7Z4T9 603 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms