RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 DDX50Q9BQ39 737 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 FAM213AQ9BRX8 229 aa17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 SPATA16Q9BXB7 569 aa17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 PITPNM3Q9BZ71 974 aa17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 EXOSC4Q9NPD3 245 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 M0QYV0 167 aa17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 USP17L8P0C7I0 530 aa17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 TTLL4Q14679 1199 aa17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 INAQ16352 499 aa17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 PBKQ96KB5 322 aa17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 SOX13Q9UN79 622 aa17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 PGRMC1O00264 195 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 FEN1P39748 380 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 LSM7Q9UK45 103 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 APPL1Q9UKG1 709 aa17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 ITIH6Q6UXX5 1313 aa17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 GOLGA8RI6L899 631 aa17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 SASH1O94885 1247 aa17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 ZNF555Q8NEP9 628 aa17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 DIABLOQ9NR28 239 aa17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 MYO9BQ13459 2157 aa17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 ARHGEF12Q9NZN5 1544 aa17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 MAP3K10Q02779 954 aa17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 DYNLL2Q96FJ2 89 aa17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 PIGSQ96S52 555 aa17.23■□□□□ 0.35
CACNA1A-258ENST00000638029 NNTQ13423 1086 aa17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 PDAP1Q13442 181 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 ZC3H7BQ9UGR2 993 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 PPP6R2O75170 966 aa17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 ETFBP38117 255 aa17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 TMED10P49755 219 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 CDC16Q13042 620 aa17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 BNIPLQ7Z465 357 aa17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 SERPING1P05155 500 aa17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 APBA1Q02410 837 aa17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 BFSP2Q13515 415 aa17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 APOL5Q9BWW9 433 aa17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 C6orf222P0C671 652 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 POMGNT2Q8NAT1 580 aa17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 ACTR5Q9H9F9 607 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 SENP2Q9HC62 589 aa17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 LATS2Q9NRM7 1088 aa17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 ANAPC7Q9UJX3 599 aa17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 CYP7B1O75881 506 aa17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 RD3Q7Z3Z2 195 aa17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 TUBB6Q9BUF5 446 aa17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 RNF26Q9BY78 433 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 KCNQ3O43525 872 aa17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 SP100P23497 879 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 KRT39Q6A163 491 aa17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 TMEM270Q6UE05 265 aa17.22■□□□□ 0.35
CACNA1A-258ENST00000638029 SOWAHDA6NJG2 315 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 H0Y626 953 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 NFIBO00712 420 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 TRIM16O95361 564 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 CHGBP05060 677 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 HNRNPH2P55795 449 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 DDI2Q5TDH0 399 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 HEATR4Q86WZ0 1026 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 STN1Q9H668 368 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 RASA4BC9J798 803 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 RASA4O43374 803 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 LRG1P02750 347 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 CSNK2BP67870 215 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 LUZP2Q86TE4 346 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 PPM1NQ8N819 430 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 USP33Q8TEY7 942 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 KIF24Q5T7B8 1368 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 ATP10AO60312 1499 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 FAM196BA6NMK8 535 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 GH2P01242 217 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 PLA2G4BP0C869 781 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 DHX35Q9H5Z1 703 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 SCAF8Q9UPN6 1271 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 HORMAD1Q86X24 394 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 FAM162AQ96A26 154 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 ENO4A6NNW6 628 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 LSG1Q9H089 658 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 NFICP08651 508 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 MMP10P09238 476 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 SCNN1BP51168 640 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 DMPKQ09013 629 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 CCDC149Q6ZUS6 474 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 ZNF438Q7Z4V0 828 aa17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 EAF2Q96CJ1 260 aaPredicted RBP17.21■□□□□ 0.35
CACNA1A-258ENST00000638029 CACUL1Q86Y37 369 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 PGBD4Q96DM1 585 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 RPRD1BQ9NQG5 326 aaKnown RBP17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 MAPKBP1O60336 1514 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 UBE3CQ15386 1083 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 KLHL11Q9NVR0 708 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 GGT7Q9UJ14 662 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 RBBP4Q09028 425 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 CUL3Q13618 768 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 L3MBTL3Q96JM7 780 aaPredicted RBP17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 ELP3Q9H9T3 547 aa17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 TMA7Q9Y2S6 64 aaKnown RBP17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 ATN1P54259 1190 aaPredicted RBP17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 RPS7P62081 194 aaKnown RBP17.2■□□□□ 0.34
CACNA1A-258ENST00000638029 USP44Q9H0E7 712 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms