RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 RSPH10B2B2RC85 870 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 NDUFB10O96000 172 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 RSPH10BP0C881 870 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 HIF1AQ16665 826 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 PODNQ7Z5L7 613 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 TSEN2Q8NCE0 465 aaKnown RBP16.86■□□□□ 0.29
CLN5-218ENST00000637397 FLAD1Q8NFF5 587 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 OSGEPQ9NPF4 335 aa16.86■□□□□ 0.29
CLN5-218ENST00000637397 MYBL1P10243 752 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 MARK3P27448 753 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 SMARCA1P28370 1054 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 KRT76Q01546 638 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 TFDP2Q14188 446 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 ENOSF1Q7L5Y1 443 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 EPS8L3Q8TE67 593 aaKnown RBP16.85■□□□□ 0.29
CLN5-218ENST00000637397 C18orf8Q96DM3 657 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 LRGUKQ96M69 825 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 AKT3Q9Y243 479 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 SCTRP47872 440 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 IFRD2Q12894 506 aaPredicted RBP16.85■□□□□ 0.29
CLN5-218ENST00000637397 ARHGAP27Q6ZUM4 889 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 ROPN1BQ9BZX4 212 aaPredicted RBP16.85■□□□□ 0.29
CLN5-218ENST00000637397 VCPKMTQ9H867 229 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 ROPN1Q9HAT0 212 aaPredicted RBP16.85■□□□□ 0.29
CLN5-218ENST00000637397 NPHS2Q9NP85 383 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 SENP1Q9P0U3 644 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 PSMC5P62195 406 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 MTM1Q13496 603 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 ITPK1Q13572 414 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 UBE4BO95155 1302 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 ITGA8P53708 1063 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 NOP14P78316 857 aaKnown RBP16.85■□□□□ 0.29
CLN5-218ENST00000637397 ITKQ08881 620 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 MEA1Q16626 185 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 SWSAP1Q6NVH7 229 aa16.85■□□□□ 0.29
CLN5-218ENST00000637397 ART3Q13508 389 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 CYFIP1Q7L576 1253 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 CENPKQ9BS16 269 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 CSADQ9Y600 493 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 ENO4A6NNW6 628 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 MED24O75448 989 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 SYF2O95926 243 aaKnown RBP16.84■□□□□ 0.29
CLN5-218ENST00000637397 ITGA4P13612 1032 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 CCND1P24385 295 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 COILP38432 576 aaPredicted RBP16.84■□□□□ 0.29
CLN5-218ENST00000637397 SLC1A1P43005 524 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 EPC2Q52LR7 807 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 SPOPLQ6IQ16 392 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 GPD1LQ8N335 351 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 ACTRT1Q8TDG2 376 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 NEU2Q9Y3R4 380 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 GABPAQ06546 454 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 TMCO4Q5TGY1 634 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 TBC1D16Q8TBP0 767 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 MKNK1Q9BUB5 465 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 BATF3Q9NR55 127 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 FOXN3O00409 490 aaPredicted RBP16.84■□□□□ 0.29
CLN5-218ENST00000637397 PSMC1P62191 440 aaKnown RBP16.84■□□□□ 0.29
CLN5-218ENST00000637397 ZNF699Q32M78 642 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 SLC27A3Q5K4L6 730 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 GADL1Q6ZQY3 521 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 LONP2Q86WA8 852 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 NUDCD3Q8IVD9 361 aa16.84■□□□□ 0.29
CLN5-218ENST00000637397 RPF1Q9H9Y2 349 aaKnown RBP16.84■□□□□ 0.29
CLN5-218ENST00000637397 MMP10P09238 476 aa16.83■□□□□ 0.29
CLN5-218ENST00000637397 SURF1Q15526 300 aa16.83■□□□□ 0.29
CLN5-218ENST00000637397 SYDE1Q6ZW31 735 aaPredicted RBP16.83■□□□□ 0.29
CLN5-218ENST00000637397 LDHDQ86WU2 507 aa16.83■□□□□ 0.29
CLN5-218ENST00000637397 SCFD1Q8WVM8 642 aa16.83■□□□□ 0.29
CLN5-218ENST00000637397 PARVAQ9NVD7 372 aa16.83■□□□□ 0.29
CLN5-218ENST00000637397 SMG5Q9UPR3 1016 aaKnown RBP16.83■□□□□ 0.29
CLN5-218ENST00000637397 SMIM22K7EJ46 135 aa16.83■□□□□ 0.28
CLN5-218ENST00000637397 HSPA4LO95757 839 aa16.83■□□□□ 0.28
CLN5-218ENST00000637397 TBXAS1P24557 533 aaPredicted RBP16.83■□□□□ 0.28
CLN5-218ENST00000637397 YWHABP31946 246 aaKnown RBP16.83■□□□□ 0.28
CLN5-218ENST00000637397 SNRNP35Q16560 246 aaKnown RBP16.83■□□□□ 0.28
CLN5-218ENST00000637397 LRRC23Q53EV4 343 aaPredicted RBP16.83■□□□□ 0.28
CLN5-218ENST00000637397 SYCP2LQ5T4T6 812 aa16.83■□□□□ 0.28
CLN5-218ENST00000637397 HDAC11Q96DB2 347 aa16.83■□□□□ 0.28
CLN5-218ENST00000637397 UBN1Q9NPG3 1134 aa16.83■□□□□ 0.28
CLN5-218ENST00000637397 RBAKQ9NYW8 714 aaPredicted RBP16.83■□□□□ 0.28
CLN5-218ENST00000637397 KRT7P08729 469 aa16.83■□□□□ 0.28
CLN5-218ENST00000637397 MYBL2P10244 700 aa16.83■□□□□ 0.28
CLN5-218ENST00000637397 SMAD1Q15797 465 aaKnown RBP16.83■□□□□ 0.28
CLN5-218ENST00000637397 KRT80Q6KB66 452 aa16.83■□□□□ 0.28
CLN5-218ENST00000637397 SLC13A5Q86YT5 568 aaPredicted RBP16.83■□□□□ 0.28
CLN5-218ENST00000637397 CYP4F11Q9HBI6 524 aa16.83■□□□□ 0.28
CLN5-218ENST00000637397 STRIP2Q9ULQ0 834 aa16.83■□□□□ 0.28
CLN5-218ENST00000637397 DNAJC3Q13217 504 aa16.83■□□□□ 0.28
CLN5-218ENST00000637397 TAF12Q16514 161 aa16.83■□□□□ 0.28
CLN5-218ENST00000637397 TRIM72Q6ZMU5 477 aa16.83■□□□□ 0.28
CLN5-218ENST00000637397 TMEM139Q8IV31 216 aa16.83■□□□□ 0.28
CLN5-218ENST00000637397 OSBPL8Q9BZF1 889 aa16.83■□□□□ 0.28
CLN5-218ENST00000637397 RASSF10A6NK89 507 aa16.82■□□□□ 0.28
CLN5-218ENST00000637397 RGS9BPQ6ZS82 235 aa16.82■□□□□ 0.28
CLN5-218ENST00000637397 ZNF277Q9NRM2 450 aaPredicted RBP16.82■□□□□ 0.28
CLN5-218ENST00000637397 NDE1Q9NXR1 346 aa16.82■□□□□ 0.28
CLN5-218ENST00000637397 FEM1BQ9UK73 627 aa16.82■□□□□ 0.28
CLN5-218ENST00000637397 PGM1P36871 562 aa16.82■□□□□ 0.28
CLN5-218ENST00000637397 ERVK-9P63128 1117 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms