RNA–Protein interactions for RNA: ENST00000636271.1

CHRNA7-212, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,974 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-212ENST00000636271 NKX3-2P78367 333 aa16.97■□□□□ 0.31
CHRNA7-212ENST00000636271 C2orf54Q08AI8 447 aa16.97■□□□□ 0.31
CHRNA7-212ENST00000636271 BRDTQ58F21 947 aaPredicted RBP16.97■□□□□ 0.31
CHRNA7-212ENST00000636271 GJB7Q6PEY0 223 aa16.97■□□□□ 0.31
CHRNA7-212ENST00000636271 LRRC71Q8N4P6 559 aa16.97■□□□□ 0.31
CHRNA7-212ENST00000636271 KIFC3Q9BVG8 833 aa16.97■□□□□ 0.31
CHRNA7-212ENST00000636271 PACSIN1Q9BY11 444 aa16.97■□□□□ 0.31
CHRNA7-212ENST00000636271 POLR3FQ9H1D9 316 aaPredicted RBP16.97■□□□□ 0.31
CHRNA7-212ENST00000636271 SUGCTQ9HAC7 445 aa16.97■□□□□ 0.31
CHRNA7-212ENST00000636271 PCDHGC5Q9Y5F6 944 aa16.97■□□□□ 0.31
CHRNA7-212ENST00000636271 ARID2Q68CP9 1835 aa16.96■□□□□ 0.31
CHRNA7-212ENST00000636271 IGKV6-21A0A0C4DH24 114 aa16.96■□□□□ 0.31
CHRNA7-212ENST00000636271 NCK2O43639 380 aa16.96■□□□□ 0.31
CHRNA7-212ENST00000636271 TRIM49P0CI25 452 aa16.96■□□□□ 0.31
CHRNA7-212ENST00000636271 TRIM49CP0CI26 452 aa16.96■□□□□ 0.31
CHRNA7-212ENST00000636271 DMTNQ08495 405 aa16.96■□□□□ 0.31
CHRNA7-212ENST00000636271 BFSP1Q12934 665 aa16.96■□□□□ 0.31
CHRNA7-212ENST00000636271 CBWD6Q4V339 395 aa16.96■□□□□ 0.31
CHRNA7-212ENST00000636271 CBWD3Q5JTY5 395 aa16.96■□□□□ 0.31
CHRNA7-212ENST00000636271 CBWD5Q5RIA9 395 aa16.96■□□□□ 0.31
CHRNA7-212ENST00000636271 VPS36Q86VN1 386 aa16.96■□□□□ 0.31
CHRNA7-212ENST00000636271 ASAP3Q8TDY4 903 aa16.96■□□□□ 0.31
CHRNA7-212ENST00000636271 TMEM174Q8WUU8 243 aa16.96■□□□□ 0.31
CHRNA7-212ENST00000636271 KIFAP3Q92845 792 aa16.96■□□□□ 0.31
CHRNA7-212ENST00000636271 ACCSQ96QU6 501 aa16.96■□□□□ 0.31
CHRNA7-212ENST00000636271 NAGPAQ9UK23 515 aa16.96■□□□□ 0.31
CHRNA7-212ENST00000636271 HAS3O00219 553 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 PALMO75781 387 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 C22orf31O95567 290 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 MYCNP04198 464 aaPredicted RBP16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 FERP16591 822 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 CXCR5P32302 372 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 ARL2P36404 184 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 STAT1P42224 750 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 NPTX2P47972 431 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 MYL7Q01449 175 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 PPFIA1Q13136 1202 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 HIC1Q14526 733 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 SMC1AQ14683 1233 aaKnown RBP16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 MFSD10Q14728 455 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 ZNF484Q5JVG2 852 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 MARCH8Q5T0T0 291 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 CXCL17Q6UXB2 119 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 PSMB7Q99436 277 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 ST6GALNAC4Q9H4F1 302 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 SETD4Q9NVD3 440 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 PPME1Q9Y570 386 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 ATP8B3O60423 1300 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 ADGRA3Q8IWK6 1321 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 HSPA8P11142 646 aaKnown RBP16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 GRIK4Q16099 956 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 CCDC181Q5TID7 509 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 LHX8Q68G74 356 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 CCSAPQ6IQ19 270 aaPredicted RBP16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 CCDC70Q6NSX1 233 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 C12orf56Q8IXR9 622 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 MMGT1Q8N4V1 131 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 KLHDC9Q8NEP7 349 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 STK33Q9BYT3 514 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 SPC25Q9HBM1 224 aa16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 HMX1Q9NP08 348 aaPredicted RBP16.95■□□□□ 0.3
CHRNA7-212ENST00000636271 CCDC169A6NNP5 214 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 F8VZ95 297 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 SLC16A4O15374 487 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 MYCP01106 439 aaPredicted RBP16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 GJB1P08034 283 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 SMIM10L2AP0DMW4 78 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 SMIM10L2BP0DMW5 78 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 KRT13P13646 458 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 GLRA2P23416 452 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 PAFAH1B1P43034 410 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 PSEN2P49810 448 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 CLCN3P51790 818 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 RTP1P59025 263 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 GTF2BQ00403 316 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 TERF2Q15554 542 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 ALKBH5Q6P6C2 394 aaKnown RBP16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 INTS8Q75QN2 995 aaKnown RBP16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 HAUS6Q7Z4H7 955 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 METTL13Q8N6R0 699 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 RDH13Q8NBN7 331 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 SPATA4Q8NEY3 305 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 PRPF31Q8WWY3 499 aaKnown RBP16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 INTS2Q9H0H0 1204 aaKnown RBP16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 DNAJC12Q9UKB3 198 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 NENFQ9UMX5 172 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 DAAM1Q9Y4D1 1078 aa16.94■□□□□ 0.3
CHRNA7-212ENST00000636271 GFPT2O94808 682 aa16.93■□□□□ 0.3
CHRNA7-212ENST00000636271 SOX5P35711 763 aa16.93■□□□□ 0.3
CHRNA7-212ENST00000636271 NCKAP1LP55160 1127 aa16.93■□□□□ 0.3
CHRNA7-212ENST00000636271 DMP1Q13316 513 aaPredicted RBP16.93■□□□□ 0.3
CHRNA7-212ENST00000636271 KCNA10Q16322 511 aa16.93■□□□□ 0.3
CHRNA7-212ENST00000636271 MAP9Q49MG5 647 aa16.93■□□□□ 0.3
CHRNA7-212ENST00000636271 EFCAB12Q6NXP0 572 aa16.93■□□□□ 0.3
CHRNA7-212ENST00000636271 SLC17A8Q8NDX2 589 aa16.93■□□□□ 0.3
CHRNA7-212ENST00000636271 TMEM161BQ8NDZ6 487 aa16.93■□□□□ 0.3
CHRNA7-212ENST00000636271 LMBR1Q8WVP7 490 aa16.93■□□□□ 0.3
CHRNA7-212ENST00000636271 NTPCRQ9BSD7 190 aaKnown RBP16.93■□□□□ 0.3
CHRNA7-212ENST00000636271 C17orf75Q9HAS0 396 aa16.93■□□□□ 0.3
CHRNA7-212ENST00000636271 RNF14Q9UBS8 474 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms