RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 RASSF4Q9H2L5 321 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 PRDM16Q9HAZ2 1276 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 HESX1Q9UBX0 185 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 NFIBO00712 420 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 MTA2O94776 668 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 COPS2P61201 443 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 CYP24A1Q07973 514 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 MYO1EQ12965 1108 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 LAMC2Q13753 1193 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 ECM1Q16610 540 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 KIAA1755Q5JYT7 1200 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 CPLX4Q7Z7G2 160 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 WDR49Q8IV35 697 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 OTUD6BQ8N6M0 293 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 ATRIPQ8WXE1 791 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 SHC3Q92529 594 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 FAM213AQ9BRX8 229 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 TOPORSQ9NS56 1045 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 SENP1Q9P0U3 644 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 ALG6Q9Y672 507 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 RSPH10B2B2RC85 870 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 PIGRP01833 764 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 RSPH10BP0C881 870 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 NR1D1P20393 614 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 JAM2P57087 298 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 GNGT1P63211 74 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 ZRSR2Q15696 482 aaKnown RBP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 NBPF9Q3BBW0 867 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 B3GNT9Q6UX72 402 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 CCDC121Q6ZUS5 278 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 RIBC1Q8N443 379 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 SPON1Q9HCB6 807 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 GGA3Q9NZ52 723 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 RSPH14Q9UHP6 348 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 ZHX1Q9UKY1 873 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 TMEM110-MUSTN1A8MSY1 372 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 ATICP31939 592 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 GCLCP48506 637 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 DRP2Q13474 957 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 BZW1Q7L1Q6 419 aaKnown RBP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 RASGEF1CQ8N431 466 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 CCDC114Q96M63 670 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 ERP44Q9BS26 406 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 RBM12Q9NTZ6 932 aaKnown RBP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 CYP39A1Q9NYL5 469 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 SPATA31C2B4DYI2 1134 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 OGTO15294 1046 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 STRNO43815 780 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 ACTN1P12814 892 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 CASP4P49662 377 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 POU5F1BQ06416 359 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 DHX9Q08211 1270 aaKnown RBP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 MKRN3Q13064 507 aaKnown RBP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 GKAP1Q5VSY0 366 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 LRRC38Q5VT99 294 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 FAM71AQ8IYT1 594 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 ATL2Q8NHH9 583 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 MFSD14AQ96MC6 490 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 PNKPQ96T60 521 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 TMEM117Q9H0C3 514 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 CYP3A43Q9HB55 503 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 BCCIPQ9P287 314 aaKnown RBP eCLIP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 NFU1Q9UMS0 254 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 CD19P15391 556 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 PDZD4Q76G19 769 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 RCOR2Q8IZ40 523 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 TMEM161BQ8NDZ6 487 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 HES6Q96HZ4 224 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 MAK16Q9BXY0 300 aaKnown RBP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 NIF3L1Q9GZT8 377 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 DDX3XO00571 662 aaKnown RBP eCLIP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 TOMM70O94826 608 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 AGTP01019 485 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 PIGHQ14442 188 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-210ENST00000635776 EPC2Q52LR7 807 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 PLPPR4Q7Z2D5 763 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 BCAS4Q8TDM0 211 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 ERAP1Q9NZ08 941 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 AGTPBP1Q9UPW5 1226 aa4.87□□□□□ -1.63
SCN1A-210ENST00000635776 ZMYM2Q9UBW7 1377 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 RRN3P2A6NIE6 340 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 RPS6KA5O75582 802 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 NOL4O94818 638 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 GNA15P30679 374 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 ALDH3A1P30838 453 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 PLCB3Q01970 1234 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 C1QBPQ07021 282 aaKnown RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 PAGR1Q9BTK6 254 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 PHACTR1Q9C0D0 580 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 ASTN2O75129 1339 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 CFAP69A5D8W1 941 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 FOXN3O00409 490 aaPredicted RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 GGCXP38435 758 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 PTENP60484 403 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 SARNPP82979 210 aaKnown RBP4.86□□□□□ -1.63
SCN1A-210ENST00000635776 SNAPC2Q13487 334 aa4.86□□□□□ -1.63
SCN1A-210ENST00000635776 ARHGEF18Q6ZSZ5 1173 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms