RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 ARF3P61204 181 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-213ENST00000630925 ARF1P84077 181 aaKnown RBP5.3□□□□□ -1.56
SDCBP-213ENST00000630925 NEDD9Q14511 834 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 ACAP2Q15057 778 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 KRT71Q3SY84 523 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 NAA16Q6N069 864 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-213ENST00000630925 INTS5Q6P9B9 1019 aaKnown RBP5.3□□□□□ -1.56
SDCBP-213ENST00000630925 ELMSAN1Q6PJG2 1045 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 RGS9BPQ6ZS82 235 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 SLFN11Q7Z7L1 901 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 ZNF295-AS1Q8N0V1 137 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 PIGOQ8TEQ8 1089 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 SGCDQ92629 289 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 MVB12AQ96EY5 273 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 CDCA5Q96FF9 252 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 AK8Q96MA6 479 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 PDCD2LQ9BRP1 358 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 ACPTQ9BZG2 426 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 PHACTR1Q9C0D0 580 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 WNT5BQ9H1J7 359 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 BCL2L12Q9HB09 334 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 PDE11AQ9HCR9 933 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 DCP1AQ9NPI6 582 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-213ENST00000630925 TMEM160Q9NX00 188 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 SIRT5Q9NXA8 310 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 SAMD15Q9P1V8 674 aa5.3□□□□□ -1.56
SDCBP-213ENST00000630925 POLR1AO95602 1720 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-213ENST00000630925 SUPT6HQ7KZ85 1726 aaKnown RBP5.3□□□□□ -1.56
SDCBP-213ENST00000630925 CFAP74Q9C0B2 1584 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 AGLP35573 1532 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.29□□□□□ -1.56
SDCBP-213ENST00000630925 GOLGA6L10A0A0M3HER8 536 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 ARHGAP10A1A4S6 786 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 LGALS16A8MUM7 142 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 HNRNPCL2B2RXH8 293 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 B4E1Z4 1266 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 IKBKBO14920 756 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 HNRNPCL1O60812 293 aaKnown RBP5.29□□□□□ -1.56
SDCBP-213ENST00000630925 KERAO60938 352 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 SLITRK3O94933 977 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 QDPRP09417 244 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 ZNF865P0CJ78 1059 aaPredicted RBP5.29□□□□□ -1.56
SDCBP-213ENST00000630925 ZSCAN22P10073 491 aaPredicted RBP5.29□□□□□ -1.56
SDCBP-213ENST00000630925 CAPN2P17655 700 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 PTPN2P17706 415 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 SERPINF1P36955 418 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 ETV1P50549 477 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 STARD6P59095 220 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 RAB15P59190 212 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 PTK2BQ14289 1009 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 COG2Q14746 738 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 LASP1Q14847 261 aaKnown RBP5.29□□□□□ -1.56
SDCBP-213ENST00000630925 POLD3Q15054 466 aaPredicted RBP5.29□□□□□ -1.56
SDCBP-213ENST00000630925 CNGA3Q16281 694 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 IMMTQ16891 758 aaKnown RBP5.29□□□□□ -1.56
SDCBP-213ENST00000630925 CLEC16AQ2KHT3 1053 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 PROSER3Q2NL68 480 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 SNX30Q5VWJ9 437 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.29□□□□□ -1.56
SDCBP-213ENST00000630925 C15orf52Q6ZUT6 534 aaKnown RBP5.29□□□□□ -1.56
SDCBP-213ENST00000630925 ZFPM1Q8IX07 1006 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 PLD6Q8N2A8 252 aaKnown RBP5.29□□□□□ -1.56
SDCBP-213ENST00000630925 AADATQ8N5Z0 425 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 ANKRD53Q8N9V6 530 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 CCHCR1Q8TD31 782 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 HSPH1Q92598 858 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 LRRC59Q96AG4 307 aaKnown RBP5.29□□□□□ -1.56
SDCBP-213ENST00000630925 ACSF2Q96CM8 615 aaPredicted RBP5.29□□□□□ -1.56
SDCBP-213ENST00000630925 C18orf8Q96DM3 657 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 TRIM47Q96LD4 638 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 HERC2P3Q9BVR0 1158 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 LGR4Q9BXB1 951 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 PAIP1Q9H074 479 aaKnown RBP5.29□□□□□ -1.56
SDCBP-213ENST00000630925 MRPL46Q9H2W6 279 aaKnown RBP5.29□□□□□ -1.56
SDCBP-213ENST00000630925 EPS8L2Q9H6S3 715 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 HOMER3Q9NSC5 361 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.29□□□□□ -1.56
SDCBP-213ENST00000630925 UBA2Q9UBT2 640 aaPredicted RBP5.29□□□□□ -1.56
SDCBP-213ENST00000630925 SUSD2Q9UGT4 822 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 SERPINB13Q9UIV8 391 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 MTUS1Q9ULD2 1270 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 EDARQ9UNE0 448 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 SRPK3Q9UPE1 567 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 EXOC7Q9UPT5 735 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 USP20Q9Y2K6 914 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 SESN1Q9Y6P5 492 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.29□□□□□ -1.56
SDCBP-213ENST00000630925 FAM135BQ49AJ0 1406 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 REREQ9P2R6 1566 aa5.29□□□□□ -1.56
SDCBP-213ENST00000630925 LCHNA4D1U4 455 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 CTAGE9A4FU28 777 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 POM121BA6NF01 834 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 SYT5O00445 386 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 CDK2AP1O14519 115 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 MGEA5O60502 916 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 PLA2G6O60733 806 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 KINO60870 393 aaKnown RBP5.28□□□□□ -1.56
SDCBP-213ENST00000630925 PIAS2O75928 621 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 KCNH1O95259 989 aa5.28□□□□□ -1.56
SDCBP-213ENST00000630925 SLU7O95391 586 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms